RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Slc7a6osQ7TPE5 306 aa11.84□□□□□ -0.51
Vcan-202ENSMUST00000109544 GopcQ8BH60 463 aa11.84□□□□□ -0.51
Vcan-202ENSMUST00000109544 Q8R1Y2 203 aa11.84□□□□□ -0.51
Vcan-202ENSMUST00000109544 Cog7Q3UM29 770 aa11.83□□□□□ -0.51
Vcan-202ENSMUST00000109544 Ccdc125Q5U465 500 aa11.83□□□□□ -0.51
Vcan-202ENSMUST00000109544 Glg1Q61543 1175 aaKnown RBP11.83□□□□□ -0.51
Vcan-202ENSMUST00000109544 Kank4Q6P9J5 1016 aa11.83□□□□□ -0.51
Vcan-202ENSMUST00000109544 Stk38lQ7TSE6 464 aa11.83□□□□□ -0.51
Vcan-202ENSMUST00000109544 Ccdc68Q8BVC4 333 aa11.83□□□□□ -0.51
Vcan-202ENSMUST00000109544 ChmQ9QXG2 665 aa11.83□□□□□ -0.51
Vcan-202ENSMUST00000109544 Proca1B0QZF7 307 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 CaluO35887 315 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Birc2Q62210 612 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Pde6cQ91ZQ1 861 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Plagl1Q9JLQ4 704 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Sall3Q62255 1320 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Ttll7A4Q9F0 912 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Ap1b1O35643 943 aaKnown RBP11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Pa2g4P50580 394 aaKnown RBP11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Pank2Q3U4S0 443 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Ppp1r13bQ62415 1087 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Ppp2r2cQ8BG02 447 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Slc4a8Q8JZR6 1089 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 H2-OaQ9QWV1 250 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Prl3d3A0A0M6L0J6 224 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Dnajc25A2ALW5 357 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Myl3P09542 204 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Nom1Q3UFM5 854 aaKnown RBP11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Atg3Q9CPX6 314 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 FibpQ9JI19 357 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Zscan25B2RX31 543 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Eef1bO70251 225 aaKnown RBP11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Dab2P98078 766 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 SpertQ32MG2 446 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Myo1gQ5SUA5 1024 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Amotl2Q8K371 772 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Bst2Q8R2Q8 172 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Rabep2Q91WG2 554 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Mrps22Q9CXW2 359 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 TnksQ6PFX9 1320 aa11.83□□□□□ -0.52
Vcan-202ENSMUST00000109544 Prl3d2F6R3P9 224 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 CopeO89079 308 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Krt19P19001 403 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Psmc2P46471 433 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Pja2Q80U04 707 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Acsl3Q9CZW4 720 aaKnown RBP11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 RabggtaQ9JHK4 567 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Nhej1Q3KNJ2 295 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Pla2g4fQ50L41 855 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Kiaa1024Q8K3V7 917 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Ppp6r3Q922D4 844 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Gm5936A2BG95 728 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Gm5640A3KG49 728 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 S100a5P63084 93 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 GnpatP98192 678 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Scaf1Q5U4C3 1256 aaKnown RBP11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Taf12Q8VE65 161 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Mlh1Q9JK91 760 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Pola1P33609 1465 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Gm30191A0A0U1RNT7 187 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Myo1aO88329 1043 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Tspyl1O88852 379 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Rad23aP54726 363 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Krt12Q64291 487 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Vps37bQ8R0J7 285 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Cst12Q9DAN8 128 aa11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Edc4Q3UJB9 1406 aaKnown RBP11.82□□□□□ -0.52
Vcan-202ENSMUST00000109544 Gm14525B1AZA0 212 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Gm2012B1B0R1 212 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Ift81O35594 676 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Gm10488Q4KL05 212 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Gm14819Q62478 212 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Herc4Q6PAV2 1057 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Rint1Q8BZ36 792 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Nrbf2Q8VCQ3 287 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Lrrd1Q8C0R9 853 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Mrps25Q9D125 171 aaKnown RBP11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Irs4Q9Z0Y7 1216 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Naip7Q9JIB3 1402 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Naip6Q9JIB6 1403 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 MgarpQ8VI64 283 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 LpxnQ99N69 386 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Zfp94E9Q6Y4 486 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Usp35M0QWN7 1009 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Eya2O08575 532 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Stk10O55098 966 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Actn4P57780 912 aaKnown RBP11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Card10P58660 1021 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Fam170aQ66LM6 333 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Vat1lQ80TB8 417 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 RragaQ80X95 313 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Cyp26b1Q811W2 512 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Zscan22Q8BGS5 496 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Znf76Q8BMU0 568 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Tmem87aQ8BXN9 555 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Zmynd15Q8C0R7 736 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Cabp7Q91ZM8 215 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Calr3Q9D9Q6 380 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Trim21Q62191 470 aa11.81□□□□□ -0.52
Vcan-202ENSMUST00000109544 Efcab14Q8BGQ6 484 aa11.81□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms