RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 GABPAQ06546 454 aa15.82■□□□□ 0.12
LINC00643-207ENST00000637212 TCP10Q12799 353 aa15.82■□□□□ 0.12
LINC00643-207ENST00000637212 C16orf86Q6ZW13 317 aa15.82■□□□□ 0.12
LINC00643-207ENST00000637212 MB21D2Q8IYB1 491 aaPredicted RBP15.82■□□□□ 0.12
LINC00643-207ENST00000637212 ZC3H15Q8WU90 426 aaKnown RBP15.82■□□□□ 0.12
LINC00643-207ENST00000637212 ESR2Q92731 530 aa15.82■□□□□ 0.12
LINC00643-207ENST00000637212 TTC14Q96N46 770 aa15.82■□□□□ 0.12
LINC00643-207ENST00000637212 UPF3BQ9BZI7 483 aaKnown RBP15.82■□□□□ 0.12
LINC00643-207ENST00000637212 MKNK2Q9HBH9 465 aa15.82■□□□□ 0.12
LINC00643-207ENST00000637212 VEZTQ9HBM0 779 aa15.82■□□□□ 0.12
LINC00643-207ENST00000637212 SERPINB13Q9UIV8 391 aa15.82■□□□□ 0.12
LINC00643-207ENST00000637212 TACC3Q9Y6A5 838 aa15.82■□□□□ 0.12
LINC00643-207ENST00000637212 ATRNL1Q5VV63 1379 aa15.82■□□□□ 0.12
LINC00643-207ENST00000637212 ROBO3Q96MS0 1386 aa15.82■□□□□ 0.12
LINC00643-207ENST00000637212 COL2A1P02458 1487 aaPredicted RBP15.82■□□□□ 0.12
LINC00643-207ENST00000637212 GOLGB1Q14789 3259 aaKnown RBP15.82■□□□□ 0.12
LINC00643-207ENST00000637212 MYH2Q9UKX2 1941 aa15.82■□□□□ 0.12
LINC00643-207ENST00000637212 SBF1O95248 1867 aa15.81■□□□□ 0.12
LINC00643-207ENST00000637212 CDK8P49336 464 aa15.81■□□□□ 0.12
LINC00643-207ENST00000637212 HIRAP54198 1017 aaPredicted RBP15.81■□□□□ 0.12
LINC00643-207ENST00000637212 BECN1Q14457 450 aa15.81■□□□□ 0.12
LINC00643-207ENST00000637212 SH3BP5LQ7L8J4 393 aa15.81■□□□□ 0.12
LINC00643-207ENST00000637212 APOBEC3FQ8IUX4 373 aaKnown RBP15.81■□□□□ 0.12
LINC00643-207ENST00000637212 ZSCAN29Q8IWY8 852 aaPredicted RBP15.81■□□□□ 0.12
LINC00643-207ENST00000637212 ZNF444Q8N0Y2 327 aaPredicted RBP15.81■□□□□ 0.12
LINC00643-207ENST00000637212 TRPM4Q8TD43 1214 aa15.81■□□□□ 0.12
LINC00643-207ENST00000637212 INCENPQ9NQS7 918 aa15.81■□□□□ 0.12
LINC00643-207ENST00000637212 ZSWIM5Q9P217 1185 aa15.81■□□□□ 0.12
LINC00643-207ENST00000637212 DICER1Q9UPY3 1922 aaKnown RBP15.8■□□□□ 0.12
LINC00643-207ENST00000637212 PITPNM2Q9BZ72 1349 aa15.8■□□□□ 0.12
LINC00643-207ENST00000637212 DDTLA6NHG4 134 aaPredicted RBP15.8■□□□□ 0.12
LINC00643-207ENST00000637212 TBC1D12O60347 775 aa15.8■□□□□ 0.12
LINC00643-207ENST00000637212 EPHX2P34913 555 aa15.8■□□□□ 0.12
LINC00643-207ENST00000637212 RASA3Q14644 834 aa15.8■□□□□ 0.12
LINC00643-207ENST00000637212 CCDC178Q5BJE1 867 aa15.8■□□□□ 0.12
LINC00643-207ENST00000637212 PNMA8AQ86V59 439 aaPredicted RBP15.8■□□□□ 0.12
LINC00643-207ENST00000637212 TMTC2Q8N394 836 aa15.8■□□□□ 0.12
LINC00643-207ENST00000637212 TMEM87BQ96K49 555 aa15.8■□□□□ 0.12
LINC00643-207ENST00000637212 PGAP2Q9UHJ9 254 aa15.8■□□□□ 0.12
LINC00643-207ENST00000637212 PPP2R3BQ9Y5P8 575 aa15.8■□□□□ 0.12
LINC00643-207ENST00000637212 CNTNAP1P78357 1384 aa15.79■□□□□ 0.12
LINC00643-207ENST00000637212 NEDD4P46934 1319 aa15.79■□□□□ 0.12
LINC00643-207ENST00000637212 B4E1Z4 1266 aa15.79■□□□□ 0.12
LINC00643-207ENST00000637212 SMIM22K7EJ46 135 aa15.79■□□□□ 0.12
LINC00643-207ENST00000637212 PRC1O43663 620 aa15.79■□□□□ 0.12
LINC00643-207ENST00000637212 KDM4AO75164 1064 aa15.79■□□□□ 0.12
LINC00643-207ENST00000637212 CPA1P15085 419 aa15.79■□□□□ 0.12
LINC00643-207ENST00000637212 MAP3K10Q02779 954 aa15.79■□□□□ 0.12
LINC00643-207ENST00000637212 HOOK2Q96ED9 719 aa15.79■□□□□ 0.12
LINC00643-207ENST00000637212 DYNLL2Q96FJ2 89 aa15.79■□□□□ 0.12
LINC00643-207ENST00000637212 CCDC17Q96LX7 622 aa15.79■□□□□ 0.12
LINC00643-207ENST00000637212 AGXT2Q9BYV1 514 aa15.79■□□□□ 0.12
LINC00643-207ENST00000637212 DEFB129Q9H1M3 183 aa15.79■□□□□ 0.12
LINC00643-207ENST00000637212 TOMM22Q9NS69 142 aa15.79■□□□□ 0.12
LINC00643-207ENST00000637212 TCP11L1Q9NUJ3 509 aa15.79■□□□□ 0.12
LINC00643-207ENST00000637212 HERC5Q9UII4 1024 aaKnown RBP15.79■□□□□ 0.12
LINC00643-207ENST00000637212 LIMCH1Q9UPQ0 1083 aa15.79■□□□□ 0.12
LINC00643-207ENST00000637212 POTECB2RU33 542 aa15.78■□□□□ 0.12
LINC00643-207ENST00000637212 RANBP6O60518 1105 aaKnown RBP15.78■□□□□ 0.12
LINC00643-207ENST00000637212 C1QTNF8P60827 252 aa15.78■□□□□ 0.12
LINC00643-207ENST00000637212 EVX2Q03828 476 aa15.78■□□□□ 0.12
LINC00643-207ENST00000637212 SART3Q15020 963 aaKnown RBP15.78■□□□□ 0.12
LINC00643-207ENST00000637212 RRP12Q5JTH9 1297 aaKnown RBP15.78■□□□□ 0.12
LINC00643-207ENST00000637212 ANGEL2Q5VTE6 544 aaKnown RBP15.78■□□□□ 0.12
LINC00643-207ENST00000637212 TATDN1Q6P1N9 297 aa15.78■□□□□ 0.12
LINC00643-207ENST00000637212 CYB5R4Q7L1T6 521 aa15.78■□□□□ 0.12
LINC00643-207ENST00000637212 HSCBQ8IWL3 235 aa15.78■□□□□ 0.12
LINC00643-207ENST00000637212 ZSCAN31Q96LW9 406 aaPredicted RBP15.78■□□□□ 0.12
LINC00643-207ENST00000637212 CSRNP1Q96S65 589 aa15.78■□□□□ 0.12
LINC00643-207ENST00000637212 TRIM34Q9BYJ4 488 aa15.78■□□□□ 0.12
LINC00643-207ENST00000637212 TAF1DQ9H5J8 278 aaPredicted RBP15.78■□□□□ 0.12
LINC00643-207ENST00000637212 RASA1P20936 1047 aa15.77■□□□□ 0.12
LINC00643-207ENST00000637212 LIFRP42702 1097 aa15.77■□□□□ 0.12
LINC00643-207ENST00000637212 AK2P54819 239 aa15.77■□□□□ 0.12
LINC00643-207ENST00000637212 ANTXR2P58335 489 aa15.77■□□□□ 0.12
LINC00643-207ENST00000637212 TFAP4Q01664 338 aa15.77■□□□□ 0.12
LINC00643-207ENST00000637212 Q6ZUG5 572 aa15.77■□□□□ 0.12
LINC00643-207ENST00000637212 IQCA1Q86XH1 822 aa15.77■□□□□ 0.12
LINC00643-207ENST00000637212 STK11IPQ8N1F8 1099 aa15.77■□□□□ 0.12
LINC00643-207ENST00000637212 CRACR2BQ8N4Y2 399 aaPredicted RBP15.77■□□□□ 0.12
LINC00643-207ENST00000637212 IGDCC4Q8TDY8 1250 aa15.77■□□□□ 0.12
LINC00643-207ENST00000637212 DCPSQ96C86 337 aaKnown RBP15.77■□□□□ 0.12
LINC00643-207ENST00000637212 TBC1D2Q9BYX2 928 aa15.77■□□□□ 0.12
LINC00643-207ENST00000637212 TMEM39BQ9GZU3 492 aa15.77■□□□□ 0.12
LINC00643-207ENST00000637212 ASTN2O75129 1339 aaPredicted RBP15.76■□□□□ 0.11
LINC00643-207ENST00000637212 ERICH2A1L162 156 aa15.76■□□□□ 0.11
LINC00643-207ENST00000637212 TSPY2A6NKD2 308 aa15.76■□□□□ 0.11
LINC00643-207ENST00000637212 PRDM1O75626 825 aa15.76■□□□□ 0.11
LINC00643-207ENST00000637212 VEGFAP15692 232 aaPredicted RBP15.76■□□□□ 0.11
LINC00643-207ENST00000637212 EVCP57679 992 aa15.76■□□□□ 0.11
LINC00643-207ENST00000637212 FGD1P98174 961 aa15.76■□□□□ 0.11
LINC00643-207ENST00000637212 COL9A3Q14050 684 aaPredicted RBP15.76■□□□□ 0.11
LINC00643-207ENST00000637212 SLC4A8Q2Y0W8 1093 aa15.76■□□□□ 0.11
LINC00643-207ENST00000637212 NEDD1Q8NHV4 660 aa15.76■□□□□ 0.11
LINC00643-207ENST00000637212 ANKS1AQ92625 1134 aa15.76■□□□□ 0.11
LINC00643-207ENST00000637212 TEPSINQ96N21 525 aa15.76■□□□□ 0.11
LINC00643-207ENST00000637212 IPO9Q96P70 1041 aaKnown RBP15.76■□□□□ 0.11
LINC00643-207ENST00000637212 UBAC1Q9BSL1 405 aa15.76■□□□□ 0.11
LINC00643-207ENST00000637212 K7ELQ4 463 aaPredicted RBP15.75■□□□□ 0.11
LINC00643-207ENST00000637212 IFIT3O14879 490 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms