RNA–Protein interactions for RNA: ENST00000624930.1

SMG6-IT1-201, SMG6 intronic transcript 1, humanhuman

BASIC

Gene SMG6-IT1, Length 374 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-IT1-201ENST00000624930 RBM28Q9NW13 759 aaKnown RBP11.47□□□□□ -0.57
SMG6-IT1-201ENST00000624930 TMEM63CQ9P1W3 806 aa11.47□□□□□ -0.57
SMG6-IT1-201ENST00000624930 TNKSO95271 1327 aa11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 GADD45BO75293 160 aaPredicted RBP11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 NPM3O75607 178 aaKnown RBP11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 CDC27P30260 824 aa11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 USP5P45974 858 aa11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 RHBDL3P58872 404 aa11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 SSRP1Q08945 709 aaKnown RBP11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 RTN1Q16799 776 aa11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 CCDC183Q5T5S1 534 aa11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 TTC6Q86TZ1 520 aa11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 ZNF654Q8IZM8 581 aa11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 CRACR2BQ8N4Y2 399 aaPredicted RBP11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 ENAHQ8N8S7 591 aaPredicted RBP11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 SH3RF3Q8TEJ3 882 aaPredicted RBP11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 LEO1Q8WVC0 666 aaPredicted RBP11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 CHAMP1Q96JM3 812 aa11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 SPATA32Q96LK8 384 aa11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 GRPEL1Q9HAV7 217 aa11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 SENP2Q9HC62 589 aa11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 MCM9Q9NXL9 1143 aa11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 RTEL1Q9NZ71 1219 aa11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 NAP1L2Q9ULW6 460 aaPredicted RBP11.46□□□□□ -0.57
SMG6-IT1-201ENST00000624930 CCDC88AQ3V6T2 1871 aa11.46□□□□□ -0.58
SMG6-IT1-201ENST00000624930 MYH13Q9UKX3 1938 aa11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 DEXIO95424 95 aa11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 YEATS4O95619 227 aa11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 XRCC6P12956 609 aaKnown RBP eCLIP11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 U2AF2P26368 475 aaKnown RBP eCLIP11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 BTDP43251 543 aa11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 NOVP48745 357 aa11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 TROAPQ12815 778 aa11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 GRIK5Q16478 980 aa11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 RRP12Q5JTH9 1297 aaKnown RBP11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 STRIP1Q5VSL9 837 aa11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 CATIPQ7Z7H3 387 aa11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 NBPF11Q86T75 865 aa11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 FERMT3Q86UX7 667 aa11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 GAS2L3Q86XJ1 694 aa11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 TRIM22Q8IYM9 498 aa11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 RNF26Q9BY78 433 aaPredicted RBP11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 TOMM22Q9NS69 142 aa11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 POLR3EQ9NVU0 708 aa11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 RBM27Q9P2N5 1060 aaKnown RBP11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 MORC2Q9Y6X9 1032 aaPredicted RBP11.45□□□□□ -0.58
SMG6-IT1-201ENST00000624930 SNED1Q8TER0 1413 aa11.44□□□□□ -0.58
SMG6-IT1-201ENST00000624930 MYO3BQ8WXR4 1341 aa11.44□□□□□ -0.58
SMG6-IT1-201ENST00000624930 PRPF3O43395 683 aaKnown RBP11.44□□□□□ -0.58
SMG6-IT1-201ENST00000624930 FIBPO43427 364 aa11.44□□□□□ -0.58
SMG6-IT1-201ENST00000624930 RANBP6O60518 1105 aaKnown RBP11.44□□□□□ -0.58
SMG6-IT1-201ENST00000624930 NASPP49321 788 aaPredicted RBP11.44□□□□□ -0.58
SMG6-IT1-201ENST00000624930 GTF2IP78347 998 aa11.44□□□□□ -0.58
SMG6-IT1-201ENST00000624930 KIF23Q02241 960 aaPredicted RBP11.44□□□□□ -0.58
SMG6-IT1-201ENST00000624930 DIXDC1Q155Q3 683 aa11.44□□□□□ -0.58
SMG6-IT1-201ENST00000624930 IFIT1BQ5T764 474 aaKnown RBP11.44□□□□□ -0.58
SMG6-IT1-201ENST00000624930 C16orf86Q6ZW13 317 aa11.44□□□□□ -0.58
SMG6-IT1-201ENST00000624930 MICU3Q86XE3 530 aa11.44□□□□□ -0.58
SMG6-IT1-201ENST00000624930 GPR101Q96P66 508 aaPredicted RBP11.44□□□□□ -0.58
SMG6-IT1-201ENST00000624930 ALG1Q9BT22 464 aa11.44□□□□□ -0.58
SMG6-IT1-201ENST00000624930 GDPD2Q9HCC8 539 aa11.44□□□□□ -0.58
SMG6-IT1-201ENST00000624930 C10orf71Q711Q0 1435 aa11.43□□□□□ -0.58
SMG6-IT1-201ENST00000624930 USP17L8P0C7I0 530 aa11.43□□□□□ -0.58
SMG6-IT1-201ENST00000624930 KIAA2012Q0VF49 1180 aa11.43□□□□□ -0.58
SMG6-IT1-201ENST00000624930 FUT2Q10981 343 aa11.43□□□□□ -0.58
SMG6-IT1-201ENST00000624930 TRIM29Q14134 588 aa11.43□□□□□ -0.58
SMG6-IT1-201ENST00000624930 KRT40Q6A162 431 aa11.43□□□□□ -0.58
SMG6-IT1-201ENST00000624930 ILDR1Q86SU0 546 aaPredicted RBP11.43□□□□□ -0.58
SMG6-IT1-201ENST00000624930 SLC51AQ86UW1 340 aa11.43□□□□□ -0.58
SMG6-IT1-201ENST00000624930 TEX11Q8IYF3 940 aa11.43□□□□□ -0.58
SMG6-IT1-201ENST00000624930 RTKN2Q8IZC4 609 aa11.43□□□□□ -0.58
SMG6-IT1-201ENST00000624930 ZNF622Q969S3 477 aaKnown RBP eCLIP11.43□□□□□ -0.58
SMG6-IT1-201ENST00000624930 FOXP1Q9H334 677 aaPredicted RBP11.43□□□□□ -0.58
SMG6-IT1-201ENST00000624930 DDX19AQ9NUU7 478 aaKnown RBP11.43□□□□□ -0.58
SMG6-IT1-201ENST00000624930 DAGLAQ9Y4D2 1042 aa11.43□□□□□ -0.58
SMG6-IT1-201ENST00000624930 CYP2D7A0A087X1C5 515 aa11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 A0A1W2PQ27 194 aa11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 A0A1W2PQ64 194 aa11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 A0A1W2PQD8 194 aa11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 GOLGA6L4A6NEF3 574 aa11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 SMARCA1P28370 1054 aa11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 KIF5BP33176 963 aa11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 GNAQP50148 359 aa11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 FOXD4L6Q3SYB3 417 aaPredicted RBP11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 MYSM1Q5VVJ2 828 aa11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 MSL1Q68DK7 614 aa11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 ADALQ6DHV7 355 aa11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 RCSD1Q6JBY9 416 aa11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 FOXD4L3Q6VB84 417 aaPredicted RBP11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 RBM43Q6ZSC3 357 aaKnown RBP11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 ZNF444Q8N0Y2 327 aaPredicted RBP11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 CERS5Q8N5B7 392 aa11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 NEDD1Q8NHV4 660 aa11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 KCNG4Q8TDN1 519 aa11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 TGFBRAP1Q8WUH2 860 aa11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 ZDHHC15Q96MV8 337 aa11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 PSMD1Q99460 953 aa11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 TFIP11Q9UBB9 837 aaKnown RBP11.42□□□□□ -0.58
SMG6-IT1-201ENST00000624930 FLT1P17948 1338 aa11.41□□□□□ -0.58
SMG6-IT1-201ENST00000624930 COL11A2P13942 1736 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms