RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 MAGEB6P1A0A0J9YX57 407 aa10.89□□□□□ -0.67
PDPN-212ENST00000621990 SEMA3EO15041 775 aa10.89□□□□□ -0.67
PDPN-212ENST00000621990 DEXIO95424 95 aa10.89□□□□□ -0.67
PDPN-212ENST00000621990 GUCY1A2P33402 732 aa10.89□□□□□ -0.67
PDPN-212ENST00000621990 TOB1P50616 345 aaPredicted RBP10.89□□□□□ -0.67
PDPN-212ENST00000621990 TRIM22Q8IYM9 498 aa10.89□□□□□ -0.67
PDPN-212ENST00000621990 FANCBQ8NB91 859 aa10.89□□□□□ -0.67
PDPN-212ENST00000621990 MINPP1Q9UNW1 487 aa10.89□□□□□ -0.67
PDPN-212ENST00000621990 ERICH2A1L162 156 aa10.88□□□□□ -0.67
PDPN-212ENST00000621990 GYG1P46976 350 aa10.88□□□□□ -0.67
PDPN-212ENST00000621990 GSDMDP57764 484 aa10.88□□□□□ -0.67
PDPN-212ENST00000621990 GNL2Q13823 731 aaKnown RBP10.88□□□□□ -0.67
PDPN-212ENST00000621990 ZRSR1Q15695 479 aaKnown RBP10.88□□□□□ -0.67
PDPN-212ENST00000621990 ZNF654Q8IZM8 581 aa10.88□□□□□ -0.67
PDPN-212ENST00000621990 FAM13BQ9NYF5 915 aa10.88□□□□□ -0.67
PDPN-212ENST00000621990 BAZ2AQ9UIF9 1905 aaKnown RBP10.88□□□□□ -0.67
PDPN-212ENST00000621990 CTIFO43310 598 aaKnown RBP10.88□□□□□ -0.67
PDPN-212ENST00000621990 CCZ1BP86790 482 aa10.88□□□□□ -0.67
PDPN-212ENST00000621990 CCZ1P86791 482 aaPredicted RBP10.88□□□□□ -0.67
PDPN-212ENST00000621990 RBM10P98175 930 aaKnown RBP10.88□□□□□ -0.67
PDPN-212ENST00000621990 CHAF1AQ13111 956 aaPredicted RBP10.88□□□□□ -0.67
PDPN-212ENST00000621990 RILPL1Q5EBL4 403 aa10.88□□□□□ -0.67
PDPN-212ENST00000621990 TMED8Q6PL24 325 aaPredicted RBP10.88□□□□□ -0.67
PDPN-212ENST00000621990 STK11IPQ8N1F8 1099 aa10.88□□□□□ -0.67
PDPN-212ENST00000621990 KRI1Q8N9T8 703 aaKnown RBP10.88□□□□□ -0.67
PDPN-212ENST00000621990 ZNF384Q8TF68 577 aa10.88□□□□□ -0.67
PDPN-212ENST00000621990 ESR2Q92731 530 aa10.88□□□□□ -0.67
PDPN-212ENST00000621990 FAM84BQ96KN1 310 aaPredicted RBP10.88□□□□□ -0.67
PDPN-212ENST00000621990 HSD3B7Q9H2F3 369 aa10.88□□□□□ -0.67
PDPN-212ENST00000621990 MYH2Q9UKX2 1941 aa10.87□□□□□ -0.67
PDPN-212ENST00000621990 SMTNL1A8MU46 457 aa10.87□□□□□ -0.67
PDPN-212ENST00000621990 BTBD18B2RXH4 712 aa10.87□□□□□ -0.67
PDPN-212ENST00000621990 SAFBQ15424 915 aaKnown RBP eCLIP10.87□□□□□ -0.67
PDPN-212ENST00000621990 CAVIN4Q5BKX8 364 aa10.87□□□□□ -0.67
PDPN-212ENST00000621990 RRP12Q5JTH9 1297 aaKnown RBP10.87□□□□□ -0.67
PDPN-212ENST00000621990 FBXO33Q7Z6M2 555 aa10.87□□□□□ -0.67
PDPN-212ENST00000621990 DIS3L2Q8IYB7 885 aaKnown RBP10.87□□□□□ -0.67
PDPN-212ENST00000621990 ZNF579Q8NAF0 562 aaKnown RBP10.87□□□□□ -0.67
PDPN-212ENST00000621990 SDR42E1Q8WUS8 393 aa10.87□□□□□ -0.67
PDPN-212ENST00000621990 ZKSCAN3Q9BRR0 538 aa10.87□□□□□ -0.67
PDPN-212ENST00000621990 UBAC1Q9BSL1 405 aa10.87□□□□□ -0.67
PDPN-212ENST00000621990 RNF26Q9BY78 433 aaPredicted RBP10.87□□□□□ -0.67
PDPN-212ENST00000621990 BCL2L12Q9HB09 334 aa10.87□□□□□ -0.67
PDPN-212ENST00000621990 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.87□□□□□ -0.67
PDPN-212ENST00000621990 MDM2Q00987 491 aaPredicted RBP10.87□□□□□ -0.67
PDPN-212ENST00000621990 FUT2Q10981 343 aa10.87□□□□□ -0.67
PDPN-212ENST00000621990 METTL16Q86W50 562 aaKnown RBP10.87□□□□□ -0.67
PDPN-212ENST00000621990 CLIC6Q96NY7 704 aa10.87□□□□□ -0.67
PDPN-212ENST00000621990 RAI14Q9P0K7 980 aa10.87□□□□□ -0.67
PDPN-212ENST00000621990 FBXO2Q9UK22 296 aaPredicted RBP10.87□□□□□ -0.67
PDPN-212ENST00000621990 KCNH3Q9ULD8 1083 aa10.87□□□□□ -0.67
PDPN-212ENST00000621990 TNKSO95271 1327 aa10.87□□□□□ -0.67
PDPN-212ENST00000621990 A0A0G2JS52 829 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 WTIPA6NIX2 430 aaPredicted RBP10.86□□□□□ -0.67
PDPN-212ENST00000621990 RIOK3O14730 519 aaKnown RBP10.86□□□□□ -0.67
PDPN-212ENST00000621990 MYO1BO43795 1136 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 PTPREP23469 700 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 DHX8Q14562 1220 aaKnown RBP10.86□□□□□ -0.67
PDPN-212ENST00000621990 ARID5BQ14865 1188 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 RC3H1Q5TC82 1133 aaKnown RBP10.86□□□□□ -0.67
PDPN-212ENST00000621990 KRBA2Q6ZNG9 492 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 ZNF710Q8N1W2 664 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 ENAHQ8N8S7 591 aaPredicted RBP10.86□□□□□ -0.67
PDPN-212ENST00000621990 ABCF2Q9UG63 623 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 NHSQ6T4R5 1651 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 SKILP12757 684 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 TPM4P67936 248 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 LONRF3Q496Y0 759 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 NT5DC1Q5TFE4 455 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 NYAP1Q6ZVC0 841 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 CELF1Q92879 486 aaKnown RBP10.86□□□□□ -0.67
PDPN-212ENST00000621990 ZSCAN10Q96SZ4 725 aaPredicted RBP10.86□□□□□ -0.67
PDPN-212ENST00000621990 NOL10Q9BSC4 688 aaKnown RBP10.86□□□□□ -0.67
PDPN-212ENST00000621990 IQSEC3Q9UPP2 1182 aaPredicted RBP10.86□□□□□ -0.67
PDPN-212ENST00000621990 BTAF1O14981 1849 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 BIN1O00499 593 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 KCNJ6P48051 423 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 TBC1D9BQ66K14 1250 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 XPO4Q9C0E2 1151 aaKnown RBP10.86□□□□□ -0.67
PDPN-212ENST00000621990 NYXQ9GZU5 481 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 TOMM22Q9NS69 142 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 NARFQ9UHQ1 456 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 KCNJ14Q9UNX9 436 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 PAXBP1Q9Y5B6 917 aa10.86□□□□□ -0.67
PDPN-212ENST00000621990 CCDC88AQ3V6T2 1871 aa10.85□□□□□ -0.67
PDPN-212ENST00000621990 IRS2Q9Y4H2 1338 aa10.85□□□□□ -0.67
PDPN-212ENST00000621990 PNOCQ13519 176 aa10.85□□□□□ -0.67
PDPN-212ENST00000621990 FOXP4Q8IVH2 680 aaPredicted RBP10.85□□□□□ -0.67
PDPN-212ENST00000621990 FBXW7Q969H0 707 aa10.85□□□□□ -0.67
PDPN-212ENST00000621990 NSUN4Q96CB9 384 aaKnown RBP10.85□□□□□ -0.67
PDPN-212ENST00000621990 SHISA4Q96DD7 197 aa10.85□□□□□ -0.67
PDPN-212ENST00000621990 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.85□□□□□ -0.67
PDPN-212ENST00000621990 MINDY4BA8MYZ0 360 aa10.85□□□□□ -0.67
PDPN-212ENST00000621990 ORC4O43929 436 aa10.85□□□□□ -0.67
PDPN-212ENST00000621990 PKN1Q16512 942 aa10.85□□□□□ -0.67
PDPN-212ENST00000621990 CTR9Q6PD62 1173 aa10.85□□□□□ -0.67
PDPN-212ENST00000621990 FILIP1Q7Z7B0 1213 aa10.85□□□□□ -0.67
PDPN-212ENST00000621990 CCDC150Q8NCX0 1101 aa10.85□□□□□ -0.67
PDPN-212ENST00000621990 C16orf45Q96MC5 204 aaPredicted RBP10.85□□□□□ -0.67
PDPN-212ENST00000621990 PHF20Q9BVI0 1012 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms