RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 CYP2C8P10632 490 aa14.12□□□□□ -0.15
CPNE3-210ENST00000621245 ERICH6Q7L0X2 663 aa14.12□□□□□ -0.15
CPNE3-210ENST00000621245 ANKRD23Q86SG2 305 aa14.12□□□□□ -0.15
CPNE3-210ENST00000621245 ADGRA1Q86SQ6 560 aa14.12□□□□□ -0.15
CPNE3-210ENST00000621245 ZSCAN29Q8IWY8 852 aaPredicted RBP14.12□□□□□ -0.15
CPNE3-210ENST00000621245 TRIM47Q96LD4 638 aa14.12□□□□□ -0.15
CPNE3-210ENST00000621245 RYDENQ9NUL5 291 aaKnown RBP14.12□□□□□ -0.15
CPNE3-210ENST00000621245 DDX60LQ5H9U9 1706 aaKnown RBP14.12□□□□□ -0.15
CPNE3-210ENST00000621245 PTPRAP18433 802 aa14.11□□□□□ -0.15
CPNE3-210ENST00000621245 MAP3K10Q02779 954 aa14.11□□□□□ -0.15
CPNE3-210ENST00000621245 G3BP1Q13283 466 aaKnown RBP eCLIP14.11□□□□□ -0.15
CPNE3-210ENST00000621245 TNNI3KQ59H18 835 aa14.11□□□□□ -0.15
CPNE3-210ENST00000621245 PRPF38BQ5VTL8 546 aaKnown RBP14.11□□□□□ -0.15
CPNE3-210ENST00000621245 SCYL3Q8IZE3 742 aa14.11□□□□□ -0.15
CPNE3-210ENST00000621245 SSH3Q8TE77 659 aa14.11□□□□□ -0.15
CPNE3-210ENST00000621245 SH3RF3Q8TEJ3 882 aaPredicted RBP14.11□□□□□ -0.15
CPNE3-210ENST00000621245 ZCCHC17Q9NP64 241 aaKnown RBP14.11□□□□□ -0.15
CPNE3-210ENST00000621245 ZHX2Q9Y6X8 837 aa14.11□□□□□ -0.15
CPNE3-210ENST00000621245 FPGT-TNNI3KV9GXZ4 949 aa14.11□□□□□ -0.15
CPNE3-210ENST00000621245 PLXNB2O15031 1838 aa14.11□□□□□ -0.15
CPNE3-210ENST00000621245 A0A0G2JLL6 359 aaPredicted RBP14.1□□□□□ -0.15
CPNE3-210ENST00000621245 SHROOM1Q2M3G4 852 aaPredicted RBP14.1□□□□□ -0.15
CPNE3-210ENST00000621245 SLC9C1Q4G0N8 1177 aa14.1□□□□□ -0.15
CPNE3-210ENST00000621245 GORABQ5T7V8 394 aa14.1□□□□□ -0.15
CPNE3-210ENST00000621245 SPTY2D1Q68D10 685 aaPredicted RBP14.1□□□□□ -0.15
CPNE3-210ENST00000621245 PRRT2Q7Z6L0 340 aaPredicted RBP14.1□□□□□ -0.15
CPNE3-210ENST00000621245 RAI14Q9P0K7 980 aa14.1□□□□□ -0.15
CPNE3-210ENST00000621245 AFG3L2Q9Y4W6 797 aa14.1□□□□□ -0.15
CPNE3-210ENST00000621245 NDUFB9Q9Y6M9 179 aa14.1□□□□□ -0.15
CPNE3-210ENST00000621245 COL2A1P02458 1487 aaPredicted RBP14.1□□□□□ -0.15
CPNE3-210ENST00000621245 NAV1Q8NEY1 1877 aa14.1□□□□□ -0.15
CPNE3-210ENST00000621245 CYP2E1P05181 493 aaPredicted RBP14.09□□□□□ -0.15
CPNE3-210ENST00000621245 BCRP11274 1271 aa14.09□□□□□ -0.15
CPNE3-210ENST00000621245 ATP8B2P98198 1209 aa14.09□□□□□ -0.15
CPNE3-210ENST00000621245 DIEXFQ68CQ4 756 aaKnown RBP14.09□□□□□ -0.15
CPNE3-210ENST00000621245 GADL1Q6ZQY3 521 aa14.09□□□□□ -0.15
CPNE3-210ENST00000621245 ITPRIPQ8IWB1 547 aa14.09□□□□□ -0.15
CPNE3-210ENST00000621245 PANK1Q8TE04 598 aa14.09□□□□□ -0.15
CPNE3-210ENST00000621245 PIH1D3Q9NQM4 214 aaKnown RBP14.09□□□□□ -0.15
CPNE3-210ENST00000621245 DBNLQ9UJU6 430 aaKnown RBP14.09□□□□□ -0.15
CPNE3-210ENST00000621245 TRIM75PA6NK02 468 aa14.08□□□□□ -0.16
CPNE3-210ENST00000621245 ZBTB7BO15156 539 aaPredicted RBP14.08□□□□□ -0.16
CPNE3-210ENST00000621245 OSBPP22059 807 aa14.08□□□□□ -0.16
CPNE3-210ENST00000621245 JAG1P78504 1218 aa14.08□□□□□ -0.16
CPNE3-210ENST00000621245 MTFR1Q15390 333 aa14.08□□□□□ -0.16
CPNE3-210ENST00000621245 TREML2Q5T2D2 321 aa14.08□□□□□ -0.16
CPNE3-210ENST00000621245 OSBPL5Q9H0X9 879 aaPredicted RBP14.08□□□□□ -0.16
CPNE3-210ENST00000621245 DNAH12Q6ZR08 3092 aa14.08□□□□□ -0.16
CPNE3-210ENST00000621245 ALPK3Q96L96 1907 aa14.07□□□□□ -0.16
CPNE3-210ENST00000621245 CXCL11O14625 94 aa14.07□□□□□ -0.16
CPNE3-210ENST00000621245 SURF6O75683 361 aaKnown RBP14.07□□□□□ -0.16
CPNE3-210ENST00000621245 ZAP70P43403 619 aa14.07□□□□□ -0.16
CPNE3-210ENST00000621245 PSMC4P43686 418 aa14.07□□□□□ -0.16
CPNE3-210ENST00000621245 TTC39AQ5SRH9 613 aa14.07□□□□□ -0.16
CPNE3-210ENST00000621245 SLF2Q8IX21 1173 aa14.07□□□□□ -0.16
CPNE3-210ENST00000621245 FTSJ3Q8IY81 847 aaKnown RBP14.07□□□□□ -0.16
CPNE3-210ENST00000621245 TEX11Q8IYF3 940 aa14.07□□□□□ -0.16
CPNE3-210ENST00000621245 SHISA4Q96DD7 197 aa14.07□□□□□ -0.16
CPNE3-210ENST00000621245 CCDC8Q9H0W5 538 aaPredicted RBP14.07□□□□□ -0.16
CPNE3-210ENST00000621245 DNAJC18Q9H819 358 aa14.07□□□□□ -0.16
CPNE3-210ENST00000621245 PICK1Q9NRD5 415 aa14.07□□□□□ -0.16
CPNE3-210ENST00000621245 AATFQ9NY61 560 aaKnown RBP eCLIP14.07□□□□□ -0.16
CPNE3-210ENST00000621245 GABRQQ9UN88 632 aa14.07□□□□□ -0.16
CPNE3-210ENST00000621245 LAMA3Q16787 3333 aa14.07□□□□□ -0.16
CPNE3-210ENST00000621245 UQCRFS1P1P0C7P4 283 aa14.06□□□□□ -0.16
CPNE3-210ENST00000621245 DYNLL1P63167 89 aaKnown RBP14.06□□□□□ -0.16
CPNE3-210ENST00000621245 PRKCZQ05513 592 aa14.06□□□□□ -0.16
CPNE3-210ENST00000621245 OS9Q13438 667 aaPredicted RBP14.06□□□□□ -0.16
CPNE3-210ENST00000621245 SLC4A8Q2Y0W8 1093 aa14.06□□□□□ -0.16
CPNE3-210ENST00000621245 CEP85Q6P2H3 762 aa14.06□□□□□ -0.16
CPNE3-210ENST00000621245 EAF2Q96CJ1 260 aaPredicted RBP14.06□□□□□ -0.16
CPNE3-210ENST00000621245 GPR108Q9NPR9 543 aa14.06□□□□□ -0.16
CPNE3-210ENST00000621245 LRP2BPQ9P2M1 347 aa14.06□□□□□ -0.16
CPNE3-210ENST00000621245 SRRDQ9UH36 339 aa14.06□□□□□ -0.16
CPNE3-210ENST00000621245 NOP58Q9Y2X3 529 aaKnown RBP14.06□□□□□ -0.16
CPNE3-210ENST00000621245 ZBED9Q6R2W3 1325 aa14.06□□□□□ -0.16
CPNE3-210ENST00000621245 MYPNQ86TC9 1320 aa14.06□□□□□ -0.16
CPNE3-210ENST00000621245 MYH7P12883 1935 aa14.05□□□□□ -0.16
CPNE3-210ENST00000621245 CTNND1O60716 968 aaKnown RBP14.05□□□□□ -0.16
CPNE3-210ENST00000621245 GSTO1P78417 241 aa14.05□□□□□ -0.16
CPNE3-210ENST00000621245 KIF22Q14807 665 aa14.05□□□□□ -0.16
CPNE3-210ENST00000621245 NAA16Q6N069 864 aaPredicted RBP14.05□□□□□ -0.16
CPNE3-210ENST00000621245 MAPKAPK5Q8IW41 473 aa14.05□□□□□ -0.16
CPNE3-210ENST00000621245 PARK7Q99497 189 aaKnown RBP14.05□□□□□ -0.16
CPNE3-210ENST00000621245 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.05□□□□□ -0.16
CPNE3-210ENST00000621245 EXOC6BQ9Y2D4 811 aa14.05□□□□□ -0.16
CPNE3-210ENST00000621245 MYH8P13535 1937 aa14.04□□□□□ -0.16
CPNE3-210ENST00000621245 TBC1D12O60347 775 aa14.04□□□□□ -0.16
CPNE3-210ENST00000621245 FMNL1O95466 1100 aaPredicted RBP14.04□□□□□ -0.16
CPNE3-210ENST00000621245 TSPYL2Q9H2G4 693 aaPredicted RBP14.04□□□□□ -0.16
CPNE3-210ENST00000621245 ANTXR1Q9H6X2 564 aa14.04□□□□□ -0.16
CPNE3-210ENST00000621245 SAP30BPQ9UHR5 308 aaKnown RBP14.04□□□□□ -0.16
CPNE3-210ENST00000621245 FLT1P17948 1338 aa14.04□□□□□ -0.16
CPNE3-210ENST00000621245 BAZ2AQ9UIF9 1905 aaKnown RBP14.03□□□□□ -0.16
CPNE3-210ENST00000621245 PEX10O60683 326 aa14.03□□□□□ -0.16
CPNE3-210ENST00000621245 LDHCP07864 332 aa14.03□□□□□ -0.16
CPNE3-210ENST00000621245 SPP2Q13103 211 aa14.03□□□□□ -0.16
CPNE3-210ENST00000621245 TGFBRAP1Q8WUH2 860 aa14.03□□□□□ -0.16
CPNE3-210ENST00000621245 TMEM106CQ9BVX2 250 aa14.03□□□□□ -0.16
CPNE3-210ENST00000621245 TRIOBPQ9H2D6 2365 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms