RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 ZFYP08048 801 aaPredicted RBP9.98□□□□□ -0.81
NEK3-209ENST00000618856 CTCFP49711 727 aaPredicted RBP9.98□□□□□ -0.81
NEK3-209ENST00000618856 IRX6P78412 446 aaPredicted RBP9.98□□□□□ -0.81
NEK3-209ENST00000618856 SREBF2Q12772 1141 aa9.98□□□□□ -0.81
NEK3-209ENST00000618856 GRM1Q13255 1194 aa9.98□□□□□ -0.81
NEK3-209ENST00000618856 PPIL2Q13356 520 aa9.98□□□□□ -0.81
NEK3-209ENST00000618856 RRP1BQ14684 758 aaKnown RBP9.98□□□□□ -0.81
NEK3-209ENST00000618856 SLFNL1Q499Z3 407 aa9.98□□□□□ -0.81
NEK3-209ENST00000618856 NOM1Q5C9Z4 860 aaKnown RBP9.98□□□□□ -0.81
NEK3-209ENST00000618856 TATDN1Q6P1N9 297 aa9.98□□□□□ -0.81
NEK3-209ENST00000618856 MAPKAPK5Q8IW41 473 aa9.98□□□□□ -0.81
NEK3-209ENST00000618856 LCORLQ8N3X6 602 aa9.98□□□□□ -0.81
NEK3-209ENST00000618856 LNPKQ9C0E8 428 aa9.98□□□□□ -0.81
NEK3-209ENST00000618856 PUS7LQ9H0K6 701 aaKnown RBP9.98□□□□□ -0.81
NEK3-209ENST00000618856 PRDM10Q9NQV6 1147 aa9.98□□□□□ -0.81
NEK3-209ENST00000618856 RNF186Q9NXI6 227 aa9.98□□□□□ -0.81
NEK3-209ENST00000618856 KCNH4Q9UQ05 1017 aa9.98□□□□□ -0.81
NEK3-209ENST00000618856 CSADQ9Y600 493 aa9.98□□□□□ -0.81
NEK3-209ENST00000618856 RNF113AO15541 343 aaKnown RBP9.97□□□□□ -0.81
NEK3-209ENST00000618856 GABPAQ06546 454 aa9.97□□□□□ -0.81
NEK3-209ENST00000618856 MOGSQ13724 837 aa9.97□□□□□ -0.81
NEK3-209ENST00000618856 PLEKHM2Q8IWE5 1019 aa9.97□□□□□ -0.81
NEK3-209ENST00000618856 ZSCAN29Q8IWY8 852 aaPredicted RBP9.97□□□□□ -0.81
NEK3-209ENST00000618856 SCYL3Q8IZE3 742 aa9.97□□□□□ -0.81
NEK3-209ENST00000618856 APPBP2Q92624 585 aa9.97□□□□□ -0.81
NEK3-209ENST00000618856 AIDAQ96BJ3 306 aa9.97□□□□□ -0.81
NEK3-209ENST00000618856 STRBPQ96SI9 672 aaKnown RBP9.97□□□□□ -0.81
NEK3-209ENST00000618856 PTPN18Q99952 460 aa9.97□□□□□ -0.81
NEK3-209ENST00000618856 DCP1AQ9NPI6 582 aaPredicted RBP9.97□□□□□ -0.81
NEK3-209ENST00000618856 ATP8A2Q9NTI2 1148 aa9.97□□□□□ -0.81
NEK3-209ENST00000618856 PALD1Q9ULE6 856 aa9.97□□□□□ -0.81
NEK3-209ENST00000618856 PHIPQ8WWQ0 1821 aa9.97□□□□□ -0.81
NEK3-209ENST00000618856 DOCK1Q14185 1865 aa9.96□□□□□ -0.81
NEK3-209ENST00000618856 IGF2BP3O00425 579 aaKnown RBP eCLIP9.96□□□□□ -0.82
NEK3-209ENST00000618856 IRF6O14896 467 aa9.96□□□□□ -0.82
NEK3-209ENST00000618856 MBD4O95243 580 aa9.96□□□□□ -0.82
NEK3-209ENST00000618856 PTPRAP18433 802 aa9.96□□□□□ -0.82
NEK3-209ENST00000618856 CAP2P40123 477 aa9.96□□□□□ -0.82
NEK3-209ENST00000618856 GTF2A2P52657 109 aa9.96□□□□□ -0.82
NEK3-209ENST00000618856 B4GALNT3Q6L9W6 998 aa9.96□□□□□ -0.82
NEK3-209ENST00000618856 IFNL1Q8IU54 200 aa9.96□□□□□ -0.82
NEK3-209ENST00000618856 BRI3BPQ8WY22 251 aa9.96□□□□□ -0.82
NEK3-209ENST00000618856 OSBP2Q969R2 916 aa9.96□□□□□ -0.82
NEK3-209ENST00000618856 EVI5LQ96CN4 794 aa9.96□□□□□ -0.82
NEK3-209ENST00000618856 CRNKL1Q9BZJ0 848 aaKnown RBP9.96□□□□□ -0.82
NEK3-209ENST00000618856 BCL11AQ9H165 835 aa9.96□□□□□ -0.82
NEK3-209ENST00000618856 ARMT1Q9H993 441 aa9.96□□□□□ -0.82
NEK3-209ENST00000618856 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.96□□□□□ -0.82
NEK3-209ENST00000618856 ZCCHC17Q9NP64 241 aaKnown RBP9.96□□□□□ -0.82
NEK3-209ENST00000618856 GINM1Q9NU53 330 aa9.96□□□□□ -0.82
NEK3-209ENST00000618856 AFG3L2Q9Y4W6 797 aa9.96□□□□□ -0.82
NEK3-209ENST00000618856 NAV1Q8NEY1 1877 aa9.96□□□□□ -0.82
NEK3-209ENST00000618856 MYH1P12882 1939 aa9.95□□□□□ -0.82
NEK3-209ENST00000618856 FAM196BA6NMK8 535 aa9.95□□□□□ -0.82
NEK3-209ENST00000618856 CXCL11O14625 94 aa9.95□□□□□ -0.82
NEK3-209ENST00000618856 PRKAB2O43741 272 aa9.95□□□□□ -0.82
NEK3-209ENST00000618856 ALDH1A1P00352 501 aa9.95□□□□□ -0.82
NEK3-209ENST00000618856 PDE4AP27815 886 aa9.95□□□□□ -0.82
NEK3-209ENST00000618856 USP5P45974 858 aa9.95□□□□□ -0.82
NEK3-209ENST00000618856 PLCD1P51178 756 aa9.95□□□□□ -0.82
NEK3-209ENST00000618856 JAG1P78504 1218 aa9.95□□□□□ -0.82
NEK3-209ENST00000618856 MKRN3Q13064 507 aaKnown RBP9.95□□□□□ -0.82
NEK3-209ENST00000618856 ZMYM1Q5SVZ6 1142 aa9.95□□□□□ -0.82
NEK3-209ENST00000618856 GIMAP6Q6P9H5 292 aa9.95□□□□□ -0.82
NEK3-209ENST00000618856 TTC6Q86TZ1 520 aa9.95□□□□□ -0.82
NEK3-209ENST00000618856 SDR42E1Q8WUS8 393 aa9.95□□□□□ -0.82
NEK3-209ENST00000618856 OTUD5Q96G74 571 aa9.95□□□□□ -0.82
NEK3-209ENST00000618856 BEGAINQ9BUH8 593 aa9.95□□□□□ -0.82
NEK3-209ENST00000618856 ZBTB47Q9UFB7 747 aaPredicted RBP9.95□□□□□ -0.82
NEK3-209ENST00000618856 AK9Q5TCS8 1911 aa9.95□□□□□ -0.82
NEK3-209ENST00000618856 A0A0G2JLL6 359 aaPredicted RBP9.94□□□□□ -0.82
NEK3-209ENST00000618856 GSG1L2A8MUP6 293 aa9.94□□□□□ -0.82
NEK3-209ENST00000618856 FOXP2O15409 715 aa9.94□□□□□ -0.82
NEK3-209ENST00000618856 TRPA1O75762 1119 aa9.94□□□□□ -0.82
NEK3-209ENST00000618856 HLA-DOAP06340 250 aa9.94□□□□□ -0.82
NEK3-209ENST00000618856 SHMT1P34896 483 aa9.94□□□□□ -0.82
NEK3-209ENST00000618856 LBX1P52954 281 aa9.94□□□□□ -0.82
NEK3-209ENST00000618856 EVX2Q03828 476 aa9.94□□□□□ -0.82
NEK3-209ENST00000618856 SNAPC2Q13487 334 aa9.94□□□□□ -0.82
NEK3-209ENST00000618856 LRRFIP1Q32MZ4 808 aaKnown RBP9.94□□□□□ -0.82
NEK3-209ENST00000618856 SBK1Q52WX2 424 aa9.94□□□□□ -0.82
NEK3-209ENST00000618856 COL13A1Q5TAT6 717 aaPredicted RBP9.94□□□□□ -0.82
NEK3-209ENST00000618856 C12orf60Q5U649 245 aa9.94□□□□□ -0.82
NEK3-209ENST00000618856 PRRT2Q7Z6L0 340 aaPredicted RBP9.94□□□□□ -0.82
NEK3-209ENST00000618856 WDR18Q9BV38 432 aa9.94□□□□□ -0.82
NEK3-209ENST00000618856 TBC1D2Q9BYX2 928 aa9.94□□□□□ -0.82
NEK3-209ENST00000618856 SAP30BPQ9UHR5 308 aaKnown RBP9.94□□□□□ -0.82
NEK3-209ENST00000618856 SERPINB13Q9UIV8 391 aa9.94□□□□□ -0.82
NEK3-209ENST00000618856 CCL15-CCL14A0A0B4J2E2 113 aa9.93□□□□□ -0.82
NEK3-209ENST00000618856 M0R2C6 588 aa9.93□□□□□ -0.82
NEK3-209ENST00000618856 GPAA1O43292 621 aa9.93□□□□□ -0.82
NEK3-209ENST00000618856 CETPP11597 493 aa9.93□□□□□ -0.82
NEK3-209ENST00000618856 GNAT2P19087 354 aa9.93□□□□□ -0.82
NEK3-209ENST00000618856 CCL15Q16663 113 aa9.93□□□□□ -0.82
NEK3-209ENST00000618856 GPAT2Q6NUI2 795 aa9.93□□□□□ -0.82
NEK3-209ENST00000618856 FAM43AQ8N2R8 423 aa9.93□□□□□ -0.82
NEK3-209ENST00000618856 FSD1Q9BTV5 496 aa9.93□□□□□ -0.82
NEK3-209ENST00000618856 R3HDMLQ9H3Y0 253 aa9.93□□□□□ -0.82
NEK3-209ENST00000618856 PICK1Q9NRD5 415 aa9.93□□□□□ -0.82
NEK3-209ENST00000618856 MCM9Q9NXL9 1143 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms