RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 ADGRA2Q96PE1 1338 aa27.25■■□□□ 1.95
ARHGEF1-223ENST00000617585 IDH1O75874 414 aaKnown RBP27.25■■□□□ 1.95
ARHGEF1-223ENST00000617585 CYP7A1P22680 504 aa27.25■■□□□ 1.95
ARHGEF1-223ENST00000617585 GPAT2Q6NUI2 795 aa27.25■■□□□ 1.95
ARHGEF1-223ENST00000617585 C17orf99Q6UX52 265 aa27.25■■□□□ 1.95
ARHGEF1-223ENST00000617585 TGFBRAP1Q8WUH2 860 aa27.25■■□□□ 1.95
ARHGEF1-223ENST00000617585 NDUFB9Q9Y6M9 179 aa27.25■■□□□ 1.95
ARHGEF1-223ENST00000617585 PDHXO00330 501 aa27.24■■□□□ 1.95
ARHGEF1-223ENST00000617585 MLLT1Q03111 559 aaPredicted RBP27.24■■□□□ 1.95
ARHGEF1-223ENST00000617585 MAP3K12Q12852 859 aa27.24■■□□□ 1.95
ARHGEF1-223ENST00000617585 ARHGEF6Q15052 776 aa27.24■■□□□ 1.95
ARHGEF1-223ENST00000617585 TTF1Q15361 905 aaPredicted RBP27.24■■□□□ 1.95
ARHGEF1-223ENST00000617585 IFIT2P09913 472 aaKnown RBP27.23■■□□□ 1.95
ARHGEF1-223ENST00000617585 FASTKD5Q7L8L6 764 aaKnown RBP27.23■■□□□ 1.95
ARHGEF1-223ENST00000617585 TBC1D2Q9BYX2 928 aa27.23■■□□□ 1.95
ARHGEF1-223ENST00000617585 FAM196BA6NMK8 535 aa27.22■■□□□ 1.95
ARHGEF1-223ENST00000617585 CAP2P40123 477 aa27.22■■□□□ 1.95
ARHGEF1-223ENST00000617585 FOXP4Q8IVH2 680 aaPredicted RBP27.22■■□□□ 1.95
ARHGEF1-223ENST00000617585 MAGEB6Q8N7X4 407 aa27.22■■□□□ 1.95
ARHGEF1-223ENST00000617585 SLC45A1Q9Y2W3 748 aa27.22■■□□□ 1.95
ARHGEF1-223ENST00000617585 APBB1O00213 710 aa27.21■■□□□ 1.95
ARHGEF1-223ENST00000617585 DYNLL1P63167 89 aaKnown RBP27.21■■□□□ 1.95
ARHGEF1-223ENST00000617585 MAPKAPK5Q8IW41 473 aa27.21■■□□□ 1.95
ARHGEF1-223ENST00000617585 ZSWIM8A7E2V4 1837 aa27.2■■□□□ 1.95
ARHGEF1-223ENST00000617585 LOC285556D6RIA3 1793 aa27.2■■□□□ 1.95
ARHGEF1-223ENST00000617585 LACTBP83111 547 aaPredicted RBP27.2■■□□□ 1.94
ARHGEF1-223ENST00000617585 RRP1BQ14684 758 aaKnown RBP27.2■■□□□ 1.94
ARHGEF1-223ENST00000617585 TNRC18O15417 2968 aaPredicted RBP27.2■■□□□ 1.94
ARHGEF1-223ENST00000617585 CENPFP49454 3210 aa27.2■■□□□ 1.94
ARHGEF1-223ENST00000617585 GNRH1P01148 92 aa27.19■■□□□ 1.94
ARHGEF1-223ENST00000617585 SOX10P56693 466 aa27.19■■□□□ 1.94
ARHGEF1-223ENST00000617585 DNAJC18Q9H819 358 aa27.19■■□□□ 1.94
ARHGEF1-223ENST00000617585 RBBP6Q7Z6E9 1792 aaKnown RBP27.19■■□□□ 1.94
ARHGEF1-223ENST00000617585 ATP5JP18859 108 aa27.18■■□□□ 1.94
ARHGEF1-223ENST00000617585 PARK7Q99497 189 aaKnown RBP27.18■■□□□ 1.94
ARHGEF1-223ENST00000617585 RIOK1Q9BRS2 568 aaKnown RBP27.18■■□□□ 1.94
ARHGEF1-223ENST00000617585 GINM1Q9NU53 330 aa27.18■■□□□ 1.94
ARHGEF1-223ENST00000617585 PALD1Q9ULE6 856 aa27.18■■□□□ 1.94
ARHGEF1-223ENST00000617585 DDX60LQ5H9U9 1706 aaKnown RBP27.18■■□□□ 1.94
ARHGEF1-223ENST00000617585 MGAMO43451 1857 aa27.17■■□□□ 1.94
ARHGEF1-223ENST00000617585 MIGA1Q8NAN2 632 aa27.17■■□□□ 1.94
ARHGEF1-223ENST00000617585 ARMC5Q96C12 935 aa27.17■■□□□ 1.94
ARHGEF1-223ENST00000617585 LRRCC1Q9C099 1032 aa27.17■■□□□ 1.94
ARHGEF1-223ENST00000617585 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.17■■□□□ 1.94
ARHGEF1-223ENST00000617585 MYH7P12883 1935 aa27.16■■□□□ 1.94
ARHGEF1-223ENST00000617585 BCRP11274 1271 aa27.16■■□□□ 1.94
ARHGEF1-223ENST00000617585 KIF22Q14807 665 aa27.16■■□□□ 1.94
ARHGEF1-223ENST00000617585 PROCA1Q8NCQ7 364 aaPredicted RBP27.16■■□□□ 1.94
ARHGEF1-223ENST00000617585 ZNF280CQ8ND82 737 aa27.16■■□□□ 1.94
ARHGEF1-223ENST00000617585 DCTPP1Q9H773 170 aa27.16■■□□□ 1.94
ARHGEF1-223ENST00000617585 TCRBV5S4A2TA0A5A2 114 aa27.15■■□□□ 1.94
ARHGEF1-223ENST00000617585 TRIM75PA6NK02 468 aa27.15■■□□□ 1.94
ARHGEF1-223ENST00000617585 USP17L5A8MUK1 530 aa27.15■■□□□ 1.94
ARHGEF1-223ENST00000617585 PDE6AP16499 860 aa27.15■■□□□ 1.94
ARHGEF1-223ENST00000617585 SLC9C2Q5TAH2 1124 aa27.15■■□□□ 1.94
ARHGEF1-223ENST00000617585 CCDC84Q86UT8 332 aaPredicted RBP27.15■■□□□ 1.94
ARHGEF1-223ENST00000617585 WDR18Q9BV38 432 aa27.15■■□□□ 1.94
ARHGEF1-223ENST00000617585 ARHGAP39Q9C0H5 1083 aa27.15■■□□□ 1.94
ARHGEF1-223ENST00000617585 CPA4Q9UI42 421 aa27.15■■□□□ 1.94
ARHGEF1-223ENST00000617585 AGTPBP1Q9UPW5 1226 aa27.15■■□□□ 1.94
ARHGEF1-223ENST00000617585 GOLIM4O00461 696 aa27.14■■□□□ 1.94
ARHGEF1-223ENST00000617585 HLA-DOAP06340 250 aa27.14■■□□□ 1.94
ARHGEF1-223ENST00000617585 ASNSP08243 561 aa27.14■■□□□ 1.94
ARHGEF1-223ENST00000617585 PRMT2P55345 433 aa27.14■■□□□ 1.94
ARHGEF1-223ENST00000617585 SH3D19Q5HYK7 790 aa27.14■■□□□ 1.94
ARHGEF1-223ENST00000617585 HAUS7Q99871 368 aa27.14■■□□□ 1.94
ARHGEF1-223ENST00000617585 EHD4Q9H223 541 aa27.14■■□□□ 1.94
ARHGEF1-223ENST00000617585 CYP2C8P10632 490 aa27.13■■□□□ 1.93
ARHGEF1-223ENST00000617585 USP5P45974 858 aa27.13■■□□□ 1.93
ARHGEF1-223ENST00000617585 SPP2Q13103 211 aa27.13■■□□□ 1.93
ARHGEF1-223ENST00000617585 GADL1Q6ZQY3 521 aa27.13■■□□□ 1.93
ARHGEF1-223ENST00000617585 NAV1Q8NEY1 1877 aa27.13■■□□□ 1.93
ARHGEF1-223ENST00000617585 CTGFP29279 349 aa27.12■■□□□ 1.93
ARHGEF1-223ENST00000617585 CRACR2BQ8N4Y2 399 aaPredicted RBP27.12■■□□□ 1.93
ARHGEF1-223ENST00000617585 DNAJC2Q99543 621 aaKnown RBP27.12■■□□□ 1.93
ARHGEF1-223ENST00000617585 AS3MTQ9HBK9 375 aa27.12■■□□□ 1.93
ARHGEF1-223ENST00000617585 PAG1Q9NWQ8 432 aa27.12■■□□□ 1.93
ARHGEF1-223ENST00000617585 SAP30BPQ9UHR5 308 aaKnown RBP27.12■■□□□ 1.93
ARHGEF1-223ENST00000617585 MAGEB6P1A0A0J9YX57 407 aa27.11■■□□□ 1.93
ARHGEF1-223ENST00000617585 JAG1P78504 1218 aa27.11■■□□□ 1.93
ARHGEF1-223ENST00000617585 TATDN1Q6P1N9 297 aa27.11■■□□□ 1.93
ARHGEF1-223ENST00000617585 BOLA2Q9H3K6 86 aa27.11■■□□□ 1.93
ARHGEF1-223ENST00000617585 PTCH2Q9Y6C5 1203 aa27.11■■□□□ 1.93
ARHGEF1-223ENST00000617585 ZNF532Q9HCE3 1301 aa27.11■■□□□ 1.93
ARHGEF1-223ENST00000617585 TTC6Q86TZ1 520 aa27.1■■□□□ 1.93
ARHGEF1-223ENST00000617585 EDC3Q96F86 508 aaKnown RBP27.1■■□□□ 1.93
ARHGEF1-223ENST00000617585 PSMC4P43686 418 aa27.09■■□□□ 1.93
ARHGEF1-223ENST00000617585 RRP1P56182 461 aaKnown RBP27.09■■□□□ 1.93
ARHGEF1-223ENST00000617585 TREML2Q5T2D2 321 aa27.09■■□□□ 1.93
ARHGEF1-223ENST00000617585 TRIM47Q96LD4 638 aa27.09■■□□□ 1.93
ARHGEF1-223ENST00000617585 TRIM34Q9BYJ4 488 aa27.09■■□□□ 1.93
ARHGEF1-223ENST00000617585 SERPINB13Q9UIV8 391 aa27.09■■□□□ 1.93
ARHGEF1-223ENST00000617585 KIAA0100Q14667 2235 aaKnown RBP27.09■■□□□ 1.93
ARHGEF1-223ENST00000617585 SMARCA5O60264 1052 aaPredicted RBP27.08■■□□□ 1.93
ARHGEF1-223ENST00000617585 ADD2P35612 726 aa27.08■■□□□ 1.93
ARHGEF1-223ENST00000617585 ZNF333Q96JL9 665 aa27.08■■□□□ 1.93
ARHGEF1-223ENST00000617585 PNMA3Q9UL41 463 aa27.08■■□□□ 1.93
ARHGEF1-223ENST00000617585 HMGCS2P54868 508 aa27.07■■□□□ 1.92
ARHGEF1-223ENST00000617585 BACE1P56817 501 aa27.07■■□□□ 1.92
ARHGEF1-223ENST00000617585 CRNKL1Q9BZJ0 848 aaKnown RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms