RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 PDHXO00330 501 aa12.95□□□□□ -0.34
COL4A1-205ENST00000615732 OSBPP22059 807 aa12.95□□□□□ -0.34
COL4A1-205ENST00000615732 PRMT2P55345 433 aa12.95□□□□□ -0.34
COL4A1-205ENST00000615732 MOGSQ13724 837 aa12.95□□□□□ -0.34
COL4A1-205ENST00000615732 ANKRD23Q86SG2 305 aa12.95□□□□□ -0.34
COL4A1-205ENST00000615732 DZIP1Q86YF9 867 aaKnown RBP12.95□□□□□ -0.34
COL4A1-205ENST00000615732 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.95□□□□□ -0.34
COL4A1-205ENST00000615732 SRRDQ9UH36 339 aa12.95□□□□□ -0.34
COL4A1-205ENST00000615732 FBXO3Q9UK99 471 aa12.95□□□□□ -0.34
COL4A1-205ENST00000615732 KCNH4Q9UQ05 1017 aa12.95□□□□□ -0.34
COL4A1-205ENST00000615732 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.95□□□□□ -0.34
COL4A1-205ENST00000615732 GLRX3O76003 335 aaKnown RBP12.94□□□□□ -0.34
COL4A1-205ENST00000615732 PSMC4P43686 418 aa12.94□□□□□ -0.34
COL4A1-205ENST00000615732 TIMM10P62072 90 aa12.94□□□□□ -0.34
COL4A1-205ENST00000615732 PICALMQ13492 652 aa12.94□□□□□ -0.34
COL4A1-205ENST00000615732 NOL9Q5SY16 702 aaKnown RBP12.94□□□□□ -0.34
COL4A1-205ENST00000615732 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
COL4A1-205ENST00000615732 ZSCAN29Q8IWY8 852 aaPredicted RBP12.94□□□□□ -0.34
COL4A1-205ENST00000615732 DDX4Q9NQI0 724 aaKnown RBP12.94□□□□□ -0.34
COL4A1-205ENST00000615732 ABCF2Q9UG63 623 aa12.94□□□□□ -0.34
COL4A1-205ENST00000615732 ZNF112Q9UJU3 913 aa12.94□□□□□ -0.34
COL4A1-205ENST00000615732 DOCK2Q92608 1830 aa12.94□□□□□ -0.34
COL4A1-205ENST00000615732 TRIOBPQ9H2D6 2365 aa12.94□□□□□ -0.34
COL4A1-205ENST00000615732 GAKO14976 1311 aa12.93□□□□□ -0.34
COL4A1-205ENST00000615732 A0A1B0GUL7 405 aa12.93□□□□□ -0.34
COL4A1-205ENST00000615732 SEMA3EO15041 775 aa12.93□□□□□ -0.34
COL4A1-205ENST00000615732 REC8O95072 547 aa12.93□□□□□ -0.34
COL4A1-205ENST00000615732 CYP2C8P10632 490 aa12.93□□□□□ -0.34
COL4A1-205ENST00000615732 TFCP2Q12800 502 aa12.93□□□□□ -0.34
COL4A1-205ENST00000615732 PI16Q6UXB8 463 aa12.93□□□□□ -0.34
COL4A1-205ENST00000615732 SH3BP5LQ7L8J4 393 aa12.93□□□□□ -0.34
COL4A1-205ENST00000615732 CCDC84Q86UT8 332 aaPredicted RBP12.93□□□□□ -0.34
COL4A1-205ENST00000615732 ECHDC1Q9NTX5 307 aa12.93□□□□□ -0.34
COL4A1-205ENST00000615732 AK9Q5TCS8 1911 aa12.93□□□□□ -0.34
COL4A1-205ENST00000615732 MYPNQ86TC9 1320 aa12.92□□□□□ -0.34
COL4A1-205ENST00000615732 DDTLA6NHG4 134 aaPredicted RBP12.92□□□□□ -0.34
COL4A1-205ENST00000615732 MGAMO43451 1857 aa12.92□□□□□ -0.34
COL4A1-205ENST00000615732 FMNL1O95466 1100 aaPredicted RBP12.92□□□□□ -0.34
COL4A1-205ENST00000615732 GRK4P32298 578 aa12.92□□□□□ -0.34
COL4A1-205ENST00000615732 BTDP43251 543 aa12.92□□□□□ -0.34
COL4A1-205ENST00000615732 RBM25P49756 843 aaKnown RBP12.92□□□□□ -0.34
COL4A1-205ENST00000615732 UBE2Q1Q7Z7E8 422 aa12.92□□□□□ -0.34
COL4A1-205ENST00000615732 SCYL3Q8IZE3 742 aa12.92□□□□□ -0.34
COL4A1-205ENST00000615732 RAET1EQ8TD07 263 aa12.92□□□□□ -0.34
COL4A1-205ENST00000615732 XAGE2Q96GT9 111 aa12.92□□□□□ -0.34
COL4A1-205ENST00000615732 MROH7-TTC4A0A0A0MT08 1334 aa12.91□□□□□ -0.34
COL4A1-205ENST00000615732 FAM196BA6NMK8 535 aa12.91□□□□□ -0.34
COL4A1-205ENST00000615732 PHF20L1A8MW92 1017 aa12.91□□□□□ -0.34
COL4A1-205ENST00000615732 CCL5P13501 91 aa12.91□□□□□ -0.34
COL4A1-205ENST00000615732 GJA8P48165 433 aa12.91□□□□□ -0.34
COL4A1-205ENST00000615732 PRKCZQ05513 592 aa12.91□□□□□ -0.34
COL4A1-205ENST00000615732 GPAT2Q6NUI2 795 aa12.91□□□□□ -0.34
COL4A1-205ENST00000615732 GADL1Q6ZQY3 521 aa12.91□□□□□ -0.34
COL4A1-205ENST00000615732 ZGPATQ8N5A5 531 aaKnown RBP12.91□□□□□ -0.34
COL4A1-205ENST00000615732 PI4K2BQ8TCG2 481 aa12.91□□□□□ -0.34
COL4A1-205ENST00000615732 PARK7Q99497 189 aaKnown RBP12.91□□□□□ -0.34
COL4A1-205ENST00000615732 IDI2Q9BXS1 227 aa12.91□□□□□ -0.34
COL4A1-205ENST00000615732 CCDC8Q9H0W5 538 aaPredicted RBP12.91□□□□□ -0.34
COL4A1-205ENST00000615732 PICK1Q9NRD5 415 aa12.91□□□□□ -0.34
COL4A1-205ENST00000615732 RBM27Q9P2N5 1060 aaKnown RBP12.91□□□□□ -0.34
COL4A1-205ENST00000615732 TRIM75PA6NK02 468 aa12.9□□□□□ -0.34
COL4A1-205ENST00000615732 ENTPD3O75355 529 aa12.9□□□□□ -0.34
COL4A1-205ENST00000615732 MAP4K4O95819 1239 aaPredicted RBP12.9□□□□□ -0.34
COL4A1-205ENST00000615732 BCRP11274 1271 aa12.9□□□□□ -0.34
COL4A1-205ENST00000615732 PTPRAP18433 802 aa12.9□□□□□ -0.34
COL4A1-205ENST00000615732 HOXD10P28358 340 aa12.9□□□□□ -0.34
COL4A1-205ENST00000615732 MECOMQ03112 1051 aa12.9□□□□□ -0.34
COL4A1-205ENST00000615732 HSCBQ8IWL3 235 aa12.9□□□□□ -0.34
COL4A1-205ENST00000615732 NKX2-3Q8TAU0 364 aa12.9□□□□□ -0.34
COL4A1-205ENST00000615732 ZNF384Q8TF68 577 aa12.9□□□□□ -0.34
COL4A1-205ENST00000615732 DPF3Q92784 378 aa12.9□□□□□ -0.34
COL4A1-205ENST00000615732 NEUROD6Q96NK8 337 aa12.9□□□□□ -0.34
COL4A1-205ENST00000615732 ZHX2Q9Y6X8 837 aa12.9□□□□□ -0.34
COL4A1-205ENST00000615732 DOCK1Q14185 1865 aa12.89□□□□□ -0.35
COL4A1-205ENST00000615732 A0A0G2JLL6 359 aaPredicted RBP12.89□□□□□ -0.35
COL4A1-205ENST00000615732 GJB1P08034 283 aa12.89□□□□□ -0.35
COL4A1-205ENST00000615732 MCCP23508 829 aa12.89□□□□□ -0.35
COL4A1-205ENST00000615732 FCGRTP55899 365 aa12.89□□□□□ -0.35
COL4A1-205ENST00000615732 RHBDL3P58872 404 aa12.89□□□□□ -0.35
COL4A1-205ENST00000615732 TNNI3KQ59H18 835 aa12.89□□□□□ -0.35
COL4A1-205ENST00000615732 PRRT2Q7Z6L0 340 aaPredicted RBP12.89□□□□□ -0.35
COL4A1-205ENST00000615732 EAF2Q96CJ1 260 aaPredicted RBP12.89□□□□□ -0.35
COL4A1-205ENST00000615732 ESYT1Q9BSJ8 1104 aa12.89□□□□□ -0.35
COL4A1-205ENST00000615732 RNF208Q9H0X6 261 aa12.89□□□□□ -0.35
COL4A1-205ENST00000615732 HMG20BQ9P0W2 317 aa12.89□□□□□ -0.35
COL4A1-205ENST00000615732 GABRQQ9UN88 632 aa12.89□□□□□ -0.35
COL4A1-205ENST00000615732 FPGT-TNNI3KV9GXZ4 949 aa12.89□□□□□ -0.35
COL4A1-205ENST00000615732 PHIPQ8WWQ0 1821 aa12.89□□□□□ -0.35
COL4A1-205ENST00000615732 PTPRFP10586 1907 aa12.89□□□□□ -0.35
COL4A1-205ENST00000615732 PDS5AQ29RF7 1337 aaKnown RBP12.88□□□□□ -0.35
COL4A1-205ENST00000615732 MYH2Q9UKX2 1941 aa12.88□□□□□ -0.35
COL4A1-205ENST00000615732 LAMA3Q16787 3333 aa12.88□□□□□ -0.35
COL4A1-205ENST00000615732 CXCL11O14625 94 aa12.88□□□□□ -0.35
COL4A1-205ENST00000615732 CHMLP26374 656 aa12.88□□□□□ -0.35
COL4A1-205ENST00000615732 SLC4A3P48751 1232 aa12.88□□□□□ -0.35
COL4A1-205ENST00000615732 GORABQ5T7V8 394 aa12.88□□□□□ -0.35
COL4A1-205ENST00000615732 SLAIN1Q8ND83 568 aa12.88□□□□□ -0.35
COL4A1-205ENST00000615732 UNC93B1Q9H1C4 597 aa12.88□□□□□ -0.35
COL4A1-205ENST00000615732 PRO3102Q9H379 93 aa12.88□□□□□ -0.35
COL4A1-205ENST00000615732 DIAPH3Q9NSV4 1193 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms