RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.33	□□□□□ -0.28
NPIPB4-222	ENST00000614197	MAPKAPK5	Q8IW41	473 aa		13.33	□□□□□ -0.28
NPIPB4-222	ENST00000614197	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.33	□□□□□ -0.28
NPIPB4-222	ENST00000614197	ZNF384	Q8TF68	577 aa		13.33	□□□□□ -0.28
NPIPB4-222	ENST00000614197	PIH1D3	Q9NQM4	214 aa	Known RBP	13.33	□□□□□ -0.28
NPIPB4-222	ENST00000614197	OTOF	Q9HC10	1997 aa		13.32	□□□□□ -0.28
NPIPB4-222	ENST00000614197	COL2A1	P02458	1487 aa	Predicted RBP	13.32	□□□□□ -0.28
NPIPB4-222	ENST00000614197	FMNL1	O95466	1100 aa	Predicted RBP	13.32	□□□□□ -0.28
NPIPB4-222	ENST00000614197	LACTB	P83111	547 aa	Predicted RBP	13.32	□□□□□ -0.28
NPIPB4-222	ENST00000614197	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.32	□□□□□ -0.28
NPIPB4-222	ENST00000614197	SLC9C1	Q4G0N8	1177 aa		13.32	□□□□□ -0.28
NPIPB4-222	ENST00000614197	MAGEB6	Q8N7X4	407 aa		13.32	□□□□□ -0.28
NPIPB4-222	ENST00000614197	TMEM106C	Q9BVX2	250 aa		13.32	□□□□□ -0.28
NPIPB4-222	ENST00000614197	CPA4	Q9UI42	421 aa		13.32	□□□□□ -0.28
NPIPB4-222	ENST00000614197	PNMA3	Q9UL41	463 aa		13.32	□□□□□ -0.28
NPIPB4-222	ENST00000614197	AK9	Q5TCS8	1911 aa		13.32	□□□□□ -0.28
NPIPB4-222	ENST00000614197	MYH2	Q9UKX2	1941 aa		13.31	□□□□□ -0.28
NPIPB4-222	ENST00000614197		A0A0G2JLL6	359 aa	Predicted RBP	13.31	□□□□□ -0.28
NPIPB4-222	ENST00000614197	FAM196B	A6NMK8	535 aa		13.31	□□□□□ -0.28
NPIPB4-222	ENST00000614197	USP17L5	A8MUK1	530 aa		13.31	□□□□□ -0.28
NPIPB4-222	ENST00000614197	ASNS	P08243	561 aa		13.31	□□□□□ -0.28
NPIPB4-222	ENST00000614197	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.31	□□□□□ -0.28
NPIPB4-222	ENST00000614197	DNAJC2	Q99543	621 aa	Known RBP	13.31	□□□□□ -0.28
NPIPB4-222	ENST00000614197	SLC45A1	Q9Y2W3	748 aa		13.31	□□□□□ -0.28
NPIPB4-222	ENST00000614197	AFG3L2	Q9Y4W6	797 aa		13.31	□□□□□ -0.28
NPIPB4-222	ENST00000614197	FLT1	P17948	1338 aa		13.31	□□□□□ -0.28
NPIPB4-222	ENST00000614197	CAP2	P40123	477 aa		13.3	□□□□□ -0.28
NPIPB4-222	ENST00000614197	FCGRT	P55899	365 aa		13.3	□□□□□ -0.28
NPIPB4-222	ENST00000614197	C17orf99	Q6UX52	265 aa		13.3	□□□□□ -0.28
NPIPB4-222	ENST00000614197	MIGA1	Q8NAN2	632 aa		13.3	□□□□□ -0.28
NPIPB4-222	ENST00000614197	ZNF280C	Q8ND82	737 aa		13.3	□□□□□ -0.28
NPIPB4-222	ENST00000614197	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
NPIPB4-222	ENST00000614197	GINM1	Q9NU53	330 aa		13.3	□□□□□ -0.28
NPIPB4-222	ENST00000614197	TMOD4	Q9NZQ9	345 aa		13.3	□□□□□ -0.28
NPIPB4-222	ENST00000614197	SAP30BP	Q9UHR5	308 aa	Known RBP	13.3	□□□□□ -0.28
NPIPB4-222	ENST00000614197	MAGEB6P1	A0A0J9YX57	407 aa		13.29	□□□□□ -0.28
NPIPB4-222	ENST00000614197	ECM2	O94769	699 aa	Predicted RBP	13.29	□□□□□ -0.28
NPIPB4-222	ENST00000614197	OSBP	P22059	807 aa		13.29	□□□□□ -0.28
NPIPB4-222	ENST00000614197	PSMC4	P43686	418 aa		13.29	□□□□□ -0.28
NPIPB4-222	ENST00000614197	SPP2	Q13103	211 aa		13.29	□□□□□ -0.28
NPIPB4-222	ENST00000614197	SLC4A8	Q2Y0W8	1093 aa		13.29	□□□□□ -0.28
NPIPB4-222	ENST00000614197	SLC9C2	Q5TAH2	1124 aa		13.29	□□□□□ -0.28
NPIPB4-222	ENST00000614197	TTC6	Q86TZ1	520 aa		13.29	□□□□□ -0.28
NPIPB4-222	ENST00000614197	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.29	□□□□□ -0.28
NPIPB4-222	ENST00000614197	RAET1E	Q8TD07	263 aa		13.29	□□□□□ -0.28
NPIPB4-222	ENST00000614197	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
NPIPB4-222	ENST00000614197	GPATCH3	Q96I76	525 aa		13.29	□□□□□ -0.28
NPIPB4-222	ENST00000614197	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.29	□□□□□ -0.28
NPIPB4-222	ENST00000614197	LRRCC1	Q9C099	1032 aa		13.29	□□□□□ -0.28
NPIPB4-222	ENST00000614197	PALD1	Q9ULE6	856 aa		13.29	□□□□□ -0.28
NPIPB4-222	ENST00000614197	AGTPBP1	Q9UPW5	1226 aa		13.29	□□□□□ -0.28
NPIPB4-222	ENST00000614197	PTCH2	Q9Y6C5	1203 aa		13.29	□□□□□ -0.28
NPIPB4-222	ENST00000614197	GOLIM4	O00461	696 aa		13.28	□□□□□ -0.28
NPIPB4-222	ENST00000614197	POLR3D	P05423	398 aa	Predicted RBP	13.28	□□□□□ -0.28
NPIPB4-222	ENST00000614197	CYP2C8	P10632	490 aa		13.28	□□□□□ -0.28
NPIPB4-222	ENST00000614197	DYNLL1	P63167	89 aa	Known RBP	13.28	□□□□□ -0.28
NPIPB4-222	ENST00000614197	ADGRA1	Q86SQ6	560 aa		13.28	□□□□□ -0.28
NPIPB4-222	ENST00000614197	ARMC5	Q96C12	935 aa		13.28	□□□□□ -0.28
NPIPB4-222	ENST00000614197	DDRGK1	Q96HY6	314 aa		13.28	□□□□□ -0.28
NPIPB4-222	ENST00000614197	ANTXR1	Q9H6X2	564 aa		13.28	□□□□□ -0.28
NPIPB4-222	ENST00000614197	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.28	□□□□□ -0.28
NPIPB4-222	ENST00000614197	DOCK2	Q92608	1830 aa		13.27	□□□□□ -0.28
NPIPB4-222	ENST00000614197	GPAT2	Q6NUI2	795 aa		13.27	□□□□□ -0.29
NPIPB4-222	ENST00000614197	AMOTL1	Q8IY63	956 aa		13.27	□□□□□ -0.29
NPIPB4-222	ENST00000614197	BIN2	Q9UBW5	565 aa	Predicted RBP	13.27	□□□□□ -0.29
NPIPB4-222	ENST00000614197	SRRD	Q9UH36	339 aa		13.27	□□□□□ -0.29
NPIPB4-222	ENST00000614197	NDUFB9	Q9Y6M9	179 aa		13.27	□□□□□ -0.29
NPIPB4-222	ENST00000614197	LAMB1	P07942	1786 aa		13.27	□□□□□ -0.29
NPIPB4-222	ENST00000614197	C19orf81	C9J6K1	198 aa		13.26	□□□□□ -0.29
NPIPB4-222	ENST00000614197	TNPO2	O14787	897 aa	Known RBP	13.26	□□□□□ -0.29
NPIPB4-222	ENST00000614197	SLURP2	P0DP57	97 aa		13.26	□□□□□ -0.29
NPIPB4-222	ENST00000614197	PDE6A	P16499	860 aa		13.26	□□□□□ -0.29
NPIPB4-222	ENST00000614197	GCLC	P48506	637 aa	Predicted RBP	13.26	□□□□□ -0.29
NPIPB4-222	ENST00000614197	HMGCS2	P54868	508 aa		13.26	□□□□□ -0.29
NPIPB4-222	ENST00000614197	IRX3	P78415	501 aa	Predicted RBP	13.26	□□□□□ -0.29
NPIPB4-222	ENST00000614197	MOGS	Q13724	837 aa		13.26	□□□□□ -0.29
NPIPB4-222	ENST00000614197	ZSCAN25	Q6NSZ9	544 aa		13.26	□□□□□ -0.29
NPIPB4-222	ENST00000614197	MYPN	Q86TC9	1320 aa		13.26	□□□□□ -0.29
NPIPB4-222	ENST00000614197	CCDC84	Q86UT8	332 aa	Predicted RBP	13.26	□□□□□ -0.29
NPIPB4-222	ENST00000614197	SIRT2	Q8IXJ6	389 aa		13.26	□□□□□ -0.29
NPIPB4-222	ENST00000614197	TRIM47	Q96LD4	638 aa		13.26	□□□□□ -0.29
NPIPB4-222	ENST00000614197	FEZ1	Q99689	392 aa		13.26	□□□□□ -0.29
NPIPB4-222	ENST00000614197	ARHGAP39	Q9C0H5	1083 aa		13.26	□□□□□ -0.29
NPIPB4-222	ENST00000614197	BOLA2	Q9H3K6	86 aa		13.26	□□□□□ -0.29
NPIPB4-222	ENST00000614197	CABP5	Q9NP86	173 aa		13.26	□□□□□ -0.29
NPIPB4-222	ENST00000614197	PAG1	Q9NWQ8	432 aa		13.26	□□□□□ -0.29
NPIPB4-222	ENST00000614197	SERPINB13	Q9UIV8	391 aa		13.26	□□□□□ -0.29
NPIPB4-222	ENST00000614197	MAST2	Q6P0Q8	1798 aa		13.25	□□□□□ -0.29
NPIPB4-222	ENST00000614197	ATP5J	P18859	108 aa		13.25	□□□□□ -0.29
NPIPB4-222	ENST00000614197	UBXN2A	P68543	259 aa		13.25	□□□□□ -0.29
NPIPB4-222	ENST00000614197	MTMR2	Q13614	643 aa		13.25	□□□□□ -0.29
NPIPB4-222	ENST00000614197	C20orf194	Q5TEA3	1177 aa		13.25	□□□□□ -0.29
NPIPB4-222	ENST00000614197	CCAR1	Q8IX12	1150 aa	Known RBP	13.25	□□□□□ -0.29
NPIPB4-222	ENST00000614197	COA7	Q96BR5	231 aa		13.25	□□□□□ -0.29
NPIPB4-222	ENST00000614197	WDR18	Q9BV38	432 aa		13.25	□□□□□ -0.29
NPIPB4-222	ENST00000614197	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.25	□□□□□ -0.29
NPIPB4-222	ENST00000614197	ADGRA2	Q96PE1	1338 aa		13.24	□□□□□ -0.29
NPIPB4-222	ENST00000614197	ZNF532	Q9HCE3	1301 aa		13.24	□□□□□ -0.29
NPIPB4-222	ENST00000614197	USP17L10	C9JJH3	530 aa		13.24	□□□□□ -0.29
NPIPB4-222	ENST00000614197	GDF11	O95390	407 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms