RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 WWC1Q8IX03 1113 aa15.58■□□□□ 0.08
HLA-F-230ENST00000606273 FAM43AQ8N2R8 423 aa15.58■□□□□ 0.08
HLA-F-230ENST00000606273 JARID2Q92833 1246 aaPredicted RBP15.58■□□□□ 0.08
HLA-F-230ENST00000606273 COL25A1Q9BXS0 654 aaPredicted RBP15.58■□□□□ 0.08
HLA-F-230ENST00000606273 BSDC1Q9NW68 430 aaPredicted RBP15.58■□□□□ 0.08
HLA-F-230ENST00000606273 PCDHAC2Q9Y5I4 1007 aa15.58■□□□□ 0.08
HLA-F-230ENST00000606273 PSME4Q14997 1843 aa15.58■□□□□ 0.08
HLA-F-230ENST00000606273 ZNF804BA4D1E1 1349 aa15.58■□□□□ 0.08
HLA-F-230ENST00000606273 CCL15-CCL14A0A0B4J2E2 113 aa15.57■□□□□ 0.08
HLA-F-230ENST00000606273 PRMT2P55345 433 aa15.57■□□□□ 0.08
HLA-F-230ENST00000606273 LACTBP83111 547 aaPredicted RBP15.57■□□□□ 0.08
HLA-F-230ENST00000606273 KIF22Q14807 665 aa15.57■□□□□ 0.08
HLA-F-230ENST00000606273 CCL15Q16663 113 aa15.57■□□□□ 0.08
HLA-F-230ENST00000606273 HDGFL1Q5TGJ6 251 aa15.57■□□□□ 0.08
HLA-F-230ENST00000606273 PRMT6Q96LA8 375 aaPredicted RBP15.57■□□□□ 0.08
HLA-F-230ENST00000606273 NUDT12Q9BQG2 462 aa15.57■□□□□ 0.08
HLA-F-230ENST00000606273 CLRN2A0PK11 232 aa15.56■□□□□ 0.08
HLA-F-230ENST00000606273 CHL1O00533 1208 aa15.56■□□□□ 0.08
HLA-F-230ENST00000606273 TLR2O60603 784 aa15.56■□□□□ 0.08
HLA-F-230ENST00000606273 PCCAP05165 728 aaPredicted RBP15.56■□□□□ 0.08
HLA-F-230ENST00000606273 GJB1P08034 283 aa15.56■□□□□ 0.08
HLA-F-230ENST00000606273 GTF2A2P52657 109 aa15.56■□□□□ 0.08
HLA-F-230ENST00000606273 CCDC27Q2M243 656 aa15.56■□□□□ 0.08
HLA-F-230ENST00000606273 CTC1Q2NKJ3 1217 aa15.56■□□□□ 0.08
HLA-F-230ENST00000606273 RIC3Q7Z5B4 369 aa15.56■□□□□ 0.08
HLA-F-230ENST00000606273 HYPKQ9NX55 129 aa15.56■□□□□ 0.08
HLA-F-230ENST00000606273 STAP2Q9UGK3 403 aa15.56■□□□□ 0.08
HLA-F-230ENST00000606273 LEMD3Q9Y2U8 911 aa15.56■□□□□ 0.08
HLA-F-230ENST00000606273 CEP290O15078 2479 aa15.56■□□□□ 0.08
HLA-F-230ENST00000606273 J3QL48 77 aa15.55■□□□□ 0.08
HLA-F-230ENST00000606273 ZNF853P0CG23 659 aa15.55■□□□□ 0.08
HLA-F-230ENST00000606273 WNT7BP56706 349 aa15.55■□□□□ 0.08
HLA-F-230ENST00000606273 RASA3Q14644 834 aa15.55■□□□□ 0.08
HLA-F-230ENST00000606273 PTCRAQ6ISU1 281 aaPredicted RBP15.55■□□□□ 0.08
HLA-F-230ENST00000606273 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.55■□□□□ 0.08
HLA-F-230ENST00000606273 CCDC191Q8NCU4 936 aa15.55■□□□□ 0.08
HLA-F-230ENST00000606273 CDC5LQ99459 802 aaKnown RBP15.55■□□□□ 0.08
HLA-F-230ENST00000606273 STXBP5LQ9Y2K9 1186 aa15.55■□□□□ 0.08
HLA-F-230ENST00000606273 LAS1LQ9Y4W2 734 aaKnown RBP15.55■□□□□ 0.08
HLA-F-230ENST00000606273 LAMA3Q16787 3333 aa15.54■□□□□ 0.08
HLA-F-230ENST00000606273 MYO1BO43795 1136 aa15.54■□□□□ 0.08
HLA-F-230ENST00000606273 KLRK1P26718 216 aa15.54■□□□□ 0.08
HLA-F-230ENST00000606273 SMCPP49901 116 aaPredicted RBP15.54■□□□□ 0.08
HLA-F-230ENST00000606273 CERS5Q8N5B7 392 aa15.54■□□□□ 0.08
HLA-F-230ENST00000606273 DEFB123Q8N688 67 aa15.54■□□□□ 0.08
HLA-F-230ENST00000606273 MYD88Q99836 296 aa15.54■□□□□ 0.08
HLA-F-230ENST00000606273 VEZTQ9HBM0 779 aa15.54■□□□□ 0.08
HLA-F-230ENST00000606273 AOX1Q06278 1338 aa15.53■□□□□ 0.08
HLA-F-230ENST00000606273 TRIM66O15016 1216 aa15.53■□□□□ 0.08
HLA-F-230ENST00000606273 WDHD1O75717 1129 aaPredicted RBP15.53■□□□□ 0.08
HLA-F-230ENST00000606273 MS4A1P11836 297 aa15.53■□□□□ 0.08
HLA-F-230ENST00000606273 CCL5P13501 91 aa15.53■□□□□ 0.08
HLA-F-230ENST00000606273 CFAP100Q494V2 611 aa15.53■□□□□ 0.08
HLA-F-230ENST00000606273 PARP9Q8IXQ6 854 aa15.53■□□□□ 0.08
HLA-F-230ENST00000606273 TTLL11Q8NHH1 800 aa15.53■□□□□ 0.08
HLA-F-230ENST00000606273 MBIPQ9NS73 344 aa15.53■□□□□ 0.08
HLA-F-230ENST00000606273 SRRDQ9UH36 339 aa15.53■□□□□ 0.08
HLA-F-230ENST00000606273 LAMB1P07942 1786 aa15.52■□□□□ 0.08
HLA-F-230ENST00000606273 ZNF521Q96K83 1311 aa15.52■□□□□ 0.08
HLA-F-230ENST00000606273 HOXB7P09629 217 aa15.52■□□□□ 0.08
HLA-F-230ENST00000606273 CTGFP29279 349 aa15.52■□□□□ 0.08
HLA-F-230ENST00000606273 GRK4P32298 578 aa15.52■□□□□ 0.08
HLA-F-230ENST00000606273 RNF208Q9H0X6 261 aa15.52■□□□□ 0.08
HLA-F-230ENST00000606273 GREM2Q9H772 168 aa15.52■□□□□ 0.08
HLA-F-230ENST00000606273 CD209Q9NNX6 404 aa15.52■□□□□ 0.08
HLA-F-230ENST00000606273 CWC25Q9NXE8 425 aaPredicted RBP15.52■□□□□ 0.08
HLA-F-230ENST00000606273 F8W031 263 aaPredicted RBP15.51■□□□□ 0.07
HLA-F-230ENST00000606273 Q7L0L9 218 aa15.51■□□□□ 0.07
HLA-F-230ENST00000606273 U2AF1L4Q8WU68 220 aaKnown RBP15.51■□□□□ 0.07
HLA-F-230ENST00000606273 ZCCHC17Q9NP64 241 aaKnown RBP15.51■□□□□ 0.07
HLA-F-230ENST00000606273 IFT57Q9NWB7 429 aa15.51■□□□□ 0.07
HLA-F-230ENST00000606273 RIPOR2Q9Y4F9 1068 aa15.51■□□□□ 0.07
HLA-F-230ENST00000606273 CUL9Q8IWT3 2517 aa15.51■□□□□ 0.07
HLA-F-230ENST00000606273 FARP2O94887 1054 aaPredicted RBP15.5■□□□□ 0.07
HLA-F-230ENST00000606273 BMP8BP34820 402 aa15.5■□□□□ 0.07
HLA-F-230ENST00000606273 PSMC4P43686 418 aa15.5■□□□□ 0.07
HLA-F-230ENST00000606273 CTSWP56202 376 aa15.5■□□□□ 0.07
HLA-F-230ENST00000606273 VGLL4Q14135 290 aa15.5■□□□□ 0.07
HLA-F-230ENST00000606273 C17orf99Q6UX52 265 aa15.5■□□□□ 0.07
HLA-F-230ENST00000606273 HELBQ8NG08 1087 aaPredicted RBP15.5■□□□□ 0.07
HLA-F-230ENST00000606273 TSR2Q969E8 191 aaKnown RBP15.5■□□□□ 0.07
HLA-F-230ENST00000606273 TRIM47Q96LD4 638 aa15.5■□□□□ 0.07
HLA-F-230ENST00000606273 PHAXQ9H814 394 aaKnown RBP15.5■□□□□ 0.07
HLA-F-230ENST00000606273 MTMR10Q9NXD2 777 aa15.5■□□□□ 0.07
HLA-F-230ENST00000606273 GMPR2Q9P2T1 348 aaKnown RBP15.5■□□□□ 0.07
HLA-F-230ENST00000606273 ZNF646O15015 1829 aaPredicted RBP15.5■□□□□ 0.07
HLA-F-230ENST00000606273 BTBD19C9JJ37 291 aa15.49■□□□□ 0.07
HLA-F-230ENST00000606273 SGPL1O95470 568 aa15.49■□□□□ 0.07
HLA-F-230ENST00000606273 CETPP11597 493 aa15.49■□□□□ 0.07
HLA-F-230ENST00000606273 HOXD10P28358 340 aa15.49■□□□□ 0.07
HLA-F-230ENST00000606273 RAET1EQ8TD07 263 aa15.49■□□□□ 0.07
HLA-F-230ENST00000606273 TEPSINQ96N21 525 aa15.49■□□□□ 0.07
HLA-F-230ENST00000606273 GDF15Q99988 308 aa15.49■□□□□ 0.07
HLA-F-230ENST00000606273 TBC1D2Q9BYX2 928 aa15.49■□□□□ 0.07
HLA-F-230ENST00000606273 ANKRD2Q9GZV1 360 aa15.49■□□□□ 0.07
HLA-F-230ENST00000606273 CCNYL3P0C7X3 344 aa15.48■□□□□ 0.07
HLA-F-230ENST00000606273 GNAI1P63096 354 aa15.48■□□□□ 0.07
HLA-F-230ENST00000606273 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.48■□□□□ 0.077e-9■■□□□ 12.7
HLA-F-230ENST00000606273 PRR7Q8TB68 274 aa15.48■□□□□ 0.07
HLA-F-230ENST00000606273 CSADQ9Y600 493 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms