RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 DDX60LQ5H9U9 1706 aaKnown RBP16.62■□□□□ 0.25
RNF40-212ENST00000602784 SBK1Q52WX2 424 aa16.62■□□□□ 0.25
RNF40-212ENST00000602784 AMOTL1Q8IY63 956 aa16.62■□□□□ 0.25
RNF40-212ENST00000602784 CAPNS2Q96L46 248 aa16.62■□□□□ 0.25
RNF40-212ENST00000602784 NACAP1Q9BZK3 213 aa16.62■□□□□ 0.25
RNF40-212ENST00000602784 SERPINB13Q9UIV8 391 aa16.62■□□□□ 0.25
RNF40-212ENST00000602784 CSADQ9Y600 493 aa16.62■□□□□ 0.25
RNF40-212ENST00000602784 CEP350Q5VT06 3117 aa16.62■□□□□ 0.25
RNF40-212ENST00000602784 NAV1Q8NEY1 1877 aa16.61■□□□□ 0.25
RNF40-212ENST00000602784 FAM155AB1AL88 458 aaPredicted RBP16.61■□□□□ 0.25
RNF40-212ENST00000602784 USP17L12C9JPN9 530 aa16.61■□□□□ 0.25
RNF40-212ENST00000602784 USP17L21D6R901 530 aa16.61■□□□□ 0.25
RNF40-212ENST00000602784 CTNND1O60716 968 aaKnown RBP16.61■□□□□ 0.25
RNF40-212ENST00000602784 APPP05067 770 aa16.61■□□□□ 0.25
RNF40-212ENST00000602784 CHMLP26374 656 aa16.61■□□□□ 0.25
RNF40-212ENST00000602784 VEGFBP49765 207 aa16.61■□□□□ 0.25
RNF40-212ENST00000602784 PLCD1P51178 756 aa16.61■□□□□ 0.25
RNF40-212ENST00000602784 VGLL4Q14135 290 aa16.61■□□□□ 0.25
RNF40-212ENST00000602784 ALX1Q15699 326 aa16.61■□□□□ 0.25
RNF40-212ENST00000602784 NOL9Q5SY16 702 aaKnown RBP16.61■□□□□ 0.25
RNF40-212ENST00000602784 C12orf60Q5U649 245 aa16.61■□□□□ 0.25
RNF40-212ENST00000602784 CYP4F22Q6NT55 531 aa16.61■□□□□ 0.25
RNF40-212ENST00000602784 CTR9Q6PD62 1173 aa16.61■□□□□ 0.25
RNF40-212ENST00000602784 CWC27Q6UX04 472 aaKnown RBP16.61■□□□□ 0.25
RNF40-212ENST00000602784 CRACR2BQ8N4Y2 399 aaPredicted RBP16.61■□□□□ 0.25
RNF40-212ENST00000602784 RUFY2Q8WXA3 655 aa16.61■□□□□ 0.25
RNF40-212ENST00000602784 CLMNQ96JQ2 1002 aa16.61■□□□□ 0.25
RNF40-212ENST00000602784 TRIM34Q9BYJ4 488 aa16.61■□□□□ 0.25
RNF40-212ENST00000602784 ARPP21Q9UBL0 812 aaPredicted RBP16.61■□□□□ 0.25
RNF40-212ENST00000602784 CCDC171Q6TFL3 1326 aa16.61■□□□□ 0.25
RNF40-212ENST00000602784 WDR33Q9C0J8 1336 aaKnown RBP16.61■□□□□ 0.25
RNF40-212ENST00000602784 SLC10A3P09131 477 aa16.6■□□□□ 0.25
RNF40-212ENST00000602784 INPP5BP32019 993 aa16.6■□□□□ 0.25
RNF40-212ENST00000602784 MAP2K2P36507 400 aa16.6■□□□□ 0.25
RNF40-212ENST00000602784 GABPAQ06546 454 aa16.6■□□□□ 0.25
RNF40-212ENST00000602784 NOGQ13253 232 aa16.6■□□□□ 0.25
RNF40-212ENST00000602784 CCDC129Q6ZRS4 1044 aa16.6■□□□□ 0.25
RNF40-212ENST00000602784 RASAL3Q86YV0 1011 aa16.6■□□□□ 0.25
RNF40-212ENST00000602784 IFNL3Q8IZI9 196 aa16.6■□□□□ 0.25
RNF40-212ENST00000602784 ZKSCAN4Q969J2 545 aaPredicted RBP16.6■□□□□ 0.25
RNF40-212ENST00000602784 SIPA1L1O43166 1804 aa16.6■□□□□ 0.25
RNF40-212ENST00000602784 OTOFQ9HC10 1997 aa16.59■□□□□ 0.25
RNF40-212ENST00000602784 FOXP2O15409 715 aa16.59■□□□□ 0.25
RNF40-212ENST00000602784 ZBTB48P10074 688 aaPredicted RBP16.59■□□□□ 0.25
RNF40-212ENST00000602784 SPRYD7Q5W111 196 aa16.59■□□□□ 0.25
RNF40-212ENST00000602784 TATDN1Q6P1N9 297 aa16.59■□□□□ 0.25
RNF40-212ENST00000602784 PAXIP1Q6ZW49 1069 aaPredicted RBP16.59■□□□□ 0.25
RNF40-212ENST00000602784 ZNF589Q86UQ0 364 aaPredicted RBP16.59■□□□□ 0.25
RNF40-212ENST00000602784 ERO1BQ86YB8 467 aa16.59■□□□□ 0.25
RNF40-212ENST00000602784 DNAJC18Q9H819 358 aa16.59■□□□□ 0.25
RNF40-212ENST00000602784 EPB41L4AQ9HCS5 686 aaPredicted RBP16.59■□□□□ 0.25
RNF40-212ENST00000602784 GINM1Q9NU53 330 aa16.59■□□□□ 0.25
RNF40-212ENST00000602784 SWAP70Q9UH65 585 aa16.59■□□□□ 0.25
RNF40-212ENST00000602784 SNCAIPQ9Y6H5 919 aa16.59■□□□□ 0.25
RNF40-212ENST00000602784 RAD50Q92878 1312 aa16.59■□□□□ 0.25
RNF40-212ENST00000602784 BAZ2AQ9UIF9 1905 aaKnown RBP16.58■□□□□ 0.25
RNF40-212ENST00000602784 SPDYE5A6NIY4 337 aa16.58■□□□□ 0.24
RNF40-212ENST00000602784 FAM196BA6NMK8 535 aa16.58■□□□□ 0.24
RNF40-212ENST00000602784 SLURP2P0DP57 97 aa16.58■□□□□ 0.24
RNF40-212ENST00000602784 CAP2P40123 477 aa16.58■□□□□ 0.24
RNF40-212ENST00000602784 TDO2P48775 406 aa16.58■□□□□ 0.24
RNF40-212ENST00000602784 SLC4A8Q2Y0W8 1093 aa16.58■□□□□ 0.24
RNF40-212ENST00000602784 REM2Q8IYK8 340 aaPredicted RBP16.58■□□□□ 0.24
RNF40-212ENST00000602784 SCYL3Q8IZE3 742 aa16.58■□□□□ 0.24
RNF40-212ENST00000602784 NAPBQ9H115 298 aa16.58■□□□□ 0.24
RNF40-212ENST00000602784 ZMYM6O95789 1325 aa16.58■□□□□ 0.24
RNF40-212ENST00000602784 CYP2D6P10635 497 aa16.57■□□□□ 0.24
RNF40-212ENST00000602784 HSPD1P10809 573 aaKnown RBP16.57■□□□□ 0.24
RNF40-212ENST00000602784 VPS53Q5VIR6 699 aa16.57■□□□□ 0.24
RNF40-212ENST00000602784 JMYQ8N9B5 988 aa16.57■□□□□ 0.24
RNF40-212ENST00000602784 WNK4Q96J92 1243 aa16.57■□□□□ 0.24
RNF40-212ENST00000602784 ELP3Q9H9T3 547 aa16.57■□□□□ 0.24
RNF40-212ENST00000602784 PICK1Q9NRD5 415 aa16.57■□□□□ 0.24
RNF40-212ENST00000602784 ROBO3Q96MS0 1386 aa16.56■□□□□ 0.24
RNF40-212ENST00000602784 CYP2D7A0A087X1C5 515 aa16.56■□□□□ 0.24
RNF40-212ENST00000602784 SGSM2O43147 1006 aa16.56■□□□□ 0.24
RNF40-212ENST00000602784 SHMT1P34896 483 aa16.56■□□□□ 0.24
RNF40-212ENST00000602784 PPATQ06203 517 aa16.56■□□□□ 0.24
RNF40-212ENST00000602784 RRP1BQ14684 758 aaKnown RBP16.56■□□□□ 0.24
RNF40-212ENST00000602784 C16orf86Q6ZW13 317 aa16.56■□□□□ 0.24
RNF40-212ENST00000602784 OPTNQ96CV9 577 aa16.56■□□□□ 0.24
RNF40-212ENST00000602784 DSCC1Q9BVC3 393 aa16.56■□□□□ 0.24
RNF40-212ENST00000602784 MINDY4BA8MYZ0 360 aa16.55■□□□□ 0.24
RNF40-212ENST00000602784 FGAP02671 866 aa16.55■□□□□ 0.24
RNF40-212ENST00000602784 ASNSP08243 561 aa16.55■□□□□ 0.24
RNF40-212ENST00000602784 PTPRAP18433 802 aa16.55■□□□□ 0.24
RNF40-212ENST00000602784 GRM1Q13255 1194 aa16.55■□□□□ 0.24
RNF40-212ENST00000602784 PPIL2Q13356 520 aa16.55■□□□□ 0.24
RNF40-212ENST00000602784 CERKLQ49MI3 558 aaPredicted RBP16.55■□□□□ 0.24
RNF40-212ENST00000602784 TBC1D2Q9BYX2 928 aa16.55■□□□□ 0.24
RNF40-212ENST00000602784 ZNF287Q9HBT7 754 aa16.55■□□□□ 0.24
RNF40-212ENST00000602784 THSD7BQ9C0I4 1608 aa16.55■□□□□ 0.24
RNF40-212ENST00000602784 AOC2O75106 756 aa16.54■□□□□ 0.24
RNF40-212ENST00000602784 SLC3A2P08195 630 aaKnown RBP16.54■□□□□ 0.24
RNF40-212ENST00000602784 GJA5P36382 358 aa16.54■□□□□ 0.24
RNF40-212ENST00000602784 CDK8P49336 464 aa16.54■□□□□ 0.24
RNF40-212ENST00000602784 INHBEP58166 350 aa16.54■□□□□ 0.24
RNF40-212ENST00000602784 EVX2Q03828 476 aa16.54■□□□□ 0.24
RNF40-212ENST00000602784 PPARAQ07869 468 aa16.54■□□□□ 0.24
RNF40-212ENST00000602784 DYNLL2Q96FJ2 89 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms