RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 HMGCS2P54868 508 aa19.98■□□□□ 0.79
SSBP4-211ENST00000601614 RHBDL3P58872 404 aa19.98■□□□□ 0.79
SSBP4-211ENST00000601614 MAP3K21Q5TCX8 1036 aa19.98■□□□□ 0.79
SSBP4-211ENST00000601614 ZNF384Q8TF68 577 aa19.98■□□□□ 0.79
SSBP4-211ENST00000601614 UBE2OQ9C0C9 1292 aaKnown RBP19.98■□□□□ 0.79
SSBP4-211ENST00000601614 ASCC2Q9H1I8 757 aaPredicted RBP19.98■□□□□ 0.79
SSBP4-211ENST00000601614 GNL3LQ9NVN8 582 aaKnown RBP19.98■□□□□ 0.79
SSBP4-211ENST00000601614 SEMA3EO15041 775 aa19.97■□□□□ 0.79
SSBP4-211ENST00000601614 GCLCP48506 637 aaPredicted RBP19.97■□□□□ 0.79
SSBP4-211ENST00000601614 RASGRF1Q13972 1273 aa19.97■□□□□ 0.79
SSBP4-211ENST00000601614 FAM163AQ96GL9 167 aaPredicted RBP19.97■□□□□ 0.79
SSBP4-211ENST00000601614 TBC1D12O60347 775 aa19.96■□□□□ 0.79
SSBP4-211ENST00000601614 CIAO1O76071 339 aa19.96■□□□□ 0.79
SSBP4-211ENST00000601614 CYP2B6P20813 491 aa19.96■□□□□ 0.79
SSBP4-211ENST00000601614 CCDC102BQ68D86 513 aa19.96■□□□□ 0.79
SSBP4-211ENST00000601614 DZIP1Q86YF9 867 aaKnown RBP19.96■□□□□ 0.79
SSBP4-211ENST00000601614 ZNF280CQ8ND82 737 aa19.96■□□□□ 0.79
SSBP4-211ENST00000601614 CEP126Q9P2H0 1117 aa19.96■□□□□ 0.79
SSBP4-211ENST00000601614 COL2A1P02458 1487 aaPredicted RBP19.96■□□□□ 0.79
SSBP4-211ENST00000601614 MROH7-TTC4A0A0A0MT08 1334 aa19.96■□□□□ 0.79
SSBP4-211ENST00000601614 PTPRCP08575 1304 aa19.96■□□□□ 0.79
SSBP4-211ENST00000601614 ZBTB22O15209 634 aa19.95■□□□□ 0.78
SSBP4-211ENST00000601614 COL6A1P12109 1028 aa19.95■□□□□ 0.78
SSBP4-211ENST00000601614 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.95■□□□□ 0.78
SSBP4-211ENST00000601614 ABCF2Q9UG63 623 aa19.95■□□□□ 0.78
SSBP4-211ENST00000601614 PA2G4Q9UQ80 394 aaKnown RBP19.95■□□□□ 0.78
SSBP4-211ENST00000601614 MAST2Q6P0Q8 1798 aa19.95■□□□□ 0.78
SSBP4-211ENST00000601614 PRKAR2AP13861 404 aaKnown RBP19.94■□□□□ 0.78
SSBP4-211ENST00000601614 ZGPATQ8N5A5 531 aaKnown RBP19.94■□□□□ 0.78
SSBP4-211ENST00000601614 GUCD1Q96NT3 240 aa19.94■□□□□ 0.78
SSBP4-211ENST00000601614 OSBPL5Q9H0X9 879 aaPredicted RBP19.94■□□□□ 0.78
SSBP4-211ENST00000601614 MORF4L1Q9UBU8 362 aa19.94■□□□□ 0.78
SSBP4-211ENST00000601614 CDK5RAP2Q96SN8 1893 aa19.94■□□□□ 0.78
SSBP4-211ENST00000601614 GPR75-ASB3A0A0A6YYF3 556 aa19.93■□□□□ 0.78
SSBP4-211ENST00000601614 MDM2Q00987 491 aaPredicted RBP19.93■□□□□ 0.78
SSBP4-211ENST00000601614 LRRC26Q2I0M4 334 aa19.93■□□□□ 0.78
SSBP4-211ENST00000601614 SH3D19Q5HYK7 790 aa19.93■□□□□ 0.78
SSBP4-211ENST00000601614 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.93■□□□□ 0.782e-6■■■■□ 19.6
SSBP4-211ENST00000601614 SSH1Q8WYL5 1049 aa19.93■□□□□ 0.78
SSBP4-211ENST00000601614 TXNRD2Q9NNW7 524 aa19.93■□□□□ 0.78
SSBP4-211ENST00000601614 FBXO3Q9UK99 471 aa19.93■□□□□ 0.78
SSBP4-211ENST00000601614 CAP2P40123 477 aa19.92■□□□□ 0.78
SSBP4-211ENST00000601614 MECOMQ03112 1051 aa19.92■□□□□ 0.78
SSBP4-211ENST00000601614 ZNF521Q96K83 1311 aa19.92■□□□□ 0.78
SSBP4-211ENST00000601614 VCANP13611 3396 aa19.91■□□□□ 0.78
SSBP4-211ENST00000601614 LTBP2Q14767 1821 aa19.91■□□□□ 0.78
SSBP4-211ENST00000601614 POTEB2H3BUK9 544 aa19.91■□□□□ 0.78
SSBP4-211ENST00000601614 NPM3O75607 178 aaKnown RBP19.91■□□□□ 0.78
SSBP4-211ENST00000601614 CCND3P30281 292 aaPredicted RBP19.91■□□□□ 0.78
SSBP4-211ENST00000601614 TIMM10P62072 90 aa19.91■□□□□ 0.78
SSBP4-211ENST00000601614 CACNB2Q08289 660 aaPredicted RBP19.91■□□□□ 0.78
SSBP4-211ENST00000601614 LHX8Q68G74 356 aa19.91■□□□□ 0.78
SSBP4-211ENST00000601614 PDS5AQ29RF7 1337 aaKnown RBP19.91■□□□□ 0.78
SSBP4-211ENST00000601614 USP17L5A8MUK1 530 aa19.9■□□□□ 0.78
SSBP4-211ENST00000601614 IL15P40933 162 aaPredicted RBP19.9■□□□□ 0.78
SSBP4-211ENST00000601614 JAG1P78504 1218 aa19.9■□□□□ 0.78
SSBP4-211ENST00000601614 PABPC4Q13310 644 aaKnown RBP eCLIP19.9■□□□□ 0.78
SSBP4-211ENST00000601614 CCL14Q16627 93 aa19.9■□□□□ 0.78
SSBP4-211ENST00000601614 SLF2Q8IX21 1173 aa19.9■□□□□ 0.78
SSBP4-211ENST00000601614 FAM161BQ96MY7 647 aa19.9■□□□□ 0.78
SSBP4-211ENST00000601614 P2RX7Q99572 595 aaKnown RBP19.9■□□□□ 0.78
SSBP4-211ENST00000601614 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.9■□□□□ 0.78
SSBP4-211ENST00000601614 XRCC5P13010 732 aaKnown RBP19.89■□□□□ 0.77
SSBP4-211ENST00000601614 MTMR2Q13614 643 aa19.89■□□□□ 0.77
SSBP4-211ENST00000601614 SHROOM1Q2M3G4 852 aaPredicted RBP19.89■□□□□ 0.77
SSBP4-211ENST00000601614 POTEEQ6S8J3 1075 aa19.89■□□□□ 0.77
SSBP4-211ENST00000601614 USP6NLQ92738 828 aa19.89■□□□□ 0.77
SSBP4-211ENST00000601614 NUDT12Q9BQG2 462 aa19.89■□□□□ 0.77
SSBP4-211ENST00000601614 TBC1D2Q9BYX2 928 aa19.89■□□□□ 0.77
SSBP4-211ENST00000601614 LAMA2P24043 3122 aaKnown RBP19.89■□□□□ 0.77
SSBP4-211ENST00000601614 EYSQ5T1H1 3165 aa19.88■□□□□ 0.77
SSBP4-211ENST00000601614 Q3C1V9 767 aa19.88■□□□□ 0.77
SSBP4-211ENST00000601614 PI16Q6UXB8 463 aa19.88■□□□□ 0.77
SSBP4-211ENST00000601614 ERICH6Q7L0X2 663 aa19.88■□□□□ 0.77
SSBP4-211ENST00000601614 PORCNQ9H237 461 aa19.88■□□□□ 0.77
SSBP4-211ENST00000601614 FOCADQ5VW36 1801 aa19.88■□□□□ 0.77
SSBP4-211ENST00000601614 UBTFL1P0CB47 393 aaPredicted RBP19.87■□□□□ 0.77
SSBP4-211ENST00000601614 HOXA7P31268 230 aaPredicted RBP19.87■□□□□ 0.77
SSBP4-211ENST00000601614 HERVK_113P62684 666 aa19.87■□□□□ 0.77
SSBP4-211ENST00000601614 IRX3P78415 501 aaPredicted RBP19.87■□□□□ 0.77
SSBP4-211ENST00000601614 SPTY2D1Q68D10 685 aaPredicted RBP19.87■□□□□ 0.77
SSBP4-211ENST00000601614 FAM109BQ6ICB4 259 aaPredicted RBP19.87■□□□□ 0.77
SSBP4-211ENST00000601614 SOCS4Q8WXH5 440 aa19.87■□□□□ 0.77
SSBP4-211ENST00000601614 XAGE2Q96GT9 111 aa19.87■□□□□ 0.77
SSBP4-211ENST00000601614 RBPJLQ9UBG7 517 aa19.87■□□□□ 0.77
SSBP4-211ENST00000601614 MYO5AQ9Y4I1 1855 aaKnown RBP19.86■□□□□ 0.77
SSBP4-211ENST00000601614 A0A1B0GUL7 405 aa19.86■□□□□ 0.77
SSBP4-211ENST00000601614 ZKSCAN1P17029 563 aaPredicted RBP19.86■□□□□ 0.77
SSBP4-211ENST00000601614 BACE1P56817 501 aa19.86■□□□□ 0.77
SSBP4-211ENST00000601614 TBC1D9Q6ZT07 1266 aa19.86■□□□□ 0.77
SSBP4-211ENST00000601614 GPRC5AQ8NFJ5 357 aa19.86■□□□□ 0.77
SSBP4-211ENST00000601614 NSUN4Q96CB9 384 aaKnown RBP19.86■□□□□ 0.77
SSBP4-211ENST00000601614 WDR18Q9BV38 432 aa19.86■□□□□ 0.77
SSBP4-211ENST00000601614 COPRSQ9NQ92 184 aa19.86■□□□□ 0.77
SSBP4-211ENST00000601614 DNAH12Q6ZR08 3092 aa19.85■□□□□ 0.77
SSBP4-211ENST00000601614 SPTBN5Q9NRC6 3674 aaKnown RBP19.85■□□□□ 0.77
SSBP4-211ENST00000601614 RLFQ13129 1914 aa19.85■□□□□ 0.77
SSBP4-211ENST00000601614 MORN1Q5T089 497 aa19.85■□□□□ 0.77
SSBP4-211ENST00000601614 GPR142Q7Z601 462 aa19.85■□□□□ 0.77
SSBP4-211ENST00000601614 DNAJC18Q9H819 358 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms