RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 SNX14Q9Y5W7 946 aa13.72□□□□□ -0.21
ZNF548-211ENST00000600927 LDHCP07864 332 aa13.71□□□□□ -0.21
ZNF548-211ENST00000600927 ZBTB48P10074 688 aaPredicted RBP13.71□□□□□ -0.21
ZNF548-211ENST00000600927 ADD2P35612 726 aa13.71□□□□□ -0.21
ZNF548-211ENST00000600927 MAP3K12Q12852 859 aa13.71□□□□□ -0.21
ZNF548-211ENST00000600927 SH3BP5LQ7L8J4 393 aa13.71□□□□□ -0.21
ZNF548-211ENST00000600927 ZFPM1Q8IX07 1006 aa13.71□□□□□ -0.21
ZNF548-211ENST00000600927 HOOK2Q96ED9 719 aa13.71□□□□□ -0.21
ZNF548-211ENST00000600927 ANTXR1Q9H6X2 564 aa13.71□□□□□ -0.21
ZNF548-211ENST00000600927 PRDM10Q9NQV6 1147 aa13.71□□□□□ -0.21
ZNF548-211ENST00000600927 SAGE1Q9NXZ1 904 aa13.71□□□□□ -0.21
ZNF548-211ENST00000600927 RAI14Q9P0K7 980 aa13.71□□□□□ -0.21
ZNF548-211ENST00000600927 LRP2BPQ9P2M1 347 aa13.71□□□□□ -0.21
ZNF548-211ENST00000600927 CTNNA3Q9UI47 895 aa13.71□□□□□ -0.21
ZNF548-211ENST00000600927 CIZ1Q9ULV3 898 aaPredicted RBP13.71□□□□□ -0.21
ZNF548-211ENST00000600927 RBM8AQ9Y5S9 174 aaKnown RBP13.71□□□□□ -0.21
ZNF548-211ENST00000600927 FOCADQ5VW36 1801 aa13.71□□□□□ -0.22
ZNF548-211ENST00000600927 GJA5P36382 358 aa13.7□□□□□ -0.22
ZNF548-211ENST00000600927 TM4SF4P48230 202 aa13.7□□□□□ -0.22
ZNF548-211ENST00000600927 NEK4P51957 841 aa13.7□□□□□ -0.22
ZNF548-211ENST00000600927 PPP4CP60510 307 aa13.7□□□□□ -0.22
ZNF548-211ENST00000600927 MAP3K10Q02779 954 aa13.7□□□□□ -0.22
ZNF548-211ENST00000600927 COL13A1Q5TAT6 717 aaPredicted RBP13.7□□□□□ -0.22
ZNF548-211ENST00000600927 CREB3L3Q68CJ9 461 aa13.7□□□□□ -0.22
ZNF548-211ENST00000600927 WNK4Q96J92 1243 aa13.7□□□□□ -0.22
ZNF548-211ENST00000600927 CWC22Q9HCG8 908 aaKnown RBP13.7□□□□□ -0.22
ZNF548-211ENST00000600927 ZSWIM6Q9HCJ5 1215 aa13.7□□□□□ -0.22
ZNF548-211ENST00000600927 ZNF112Q9UJU3 913 aa13.7□□□□□ -0.22
ZNF548-211ENST00000600927 NDUFB9Q9Y6M9 179 aa13.7□□□□□ -0.22
ZNF548-211ENST00000600927 TCP10Q12799 353 aa13.69□□□□□ -0.22
ZNF548-211ENST00000600927 VGLL4Q14135 290 aa13.69□□□□□ -0.22
ZNF548-211ENST00000600927 DCAF15Q66K64 600 aa13.69□□□□□ -0.22
ZNF548-211ENST00000600927 NAA16Q6N069 864 aaPredicted RBP13.69□□□□□ -0.22
ZNF548-211ENST00000600927 ZNF589Q86UQ0 364 aaPredicted RBP13.69□□□□□ -0.22
ZNF548-211ENST00000600927 PALD1Q9ULE6 856 aa13.69□□□□□ -0.22
ZNF548-211ENST00000600927 SNCAIPQ9Y6H5 919 aa13.69□□□□□ -0.22
ZNF548-211ENST00000600927 CDK5RAP2Q96SN8 1893 aa13.69□□□□□ -0.22
ZNF548-211ENST00000600927 SIPA1L1O43166 1804 aa13.69□□□□□ -0.22
ZNF548-211ENST00000600927 DDX60LQ5H9U9 1706 aaKnown RBP13.68□□□□□ -0.22
ZNF548-211ENST00000600927 DDTLA6NHG4 134 aaPredicted RBP13.68□□□□□ -0.22
ZNF548-211ENST00000600927 SLC27A2O14975 620 aa13.68□□□□□ -0.22
ZNF548-211ENST00000600927 HMGB1P09429 215 aaKnown RBP13.68□□□□□ -0.22
ZNF548-211ENST00000600927 SLC4A3P48751 1232 aa13.68□□□□□ -0.22
ZNF548-211ENST00000600927 LBX1P52954 281 aa13.68□□□□□ -0.22
ZNF548-211ENST00000600927 MAP3K9P80192 1104 aa13.68□□□□□ -0.22
ZNF548-211ENST00000600927 SLC9C2Q5TAH2 1124 aa13.68□□□□□ -0.22
ZNF548-211ENST00000600927 VPS53Q5VIR6 699 aa13.68□□□□□ -0.22
ZNF548-211ENST00000600927 OSBP2Q969R2 916 aa13.68□□□□□ -0.22
ZNF548-211ENST00000600927 INTS4Q96HW7 963 aaKnown RBP13.68□□□□□ -0.22
ZNF548-211ENST00000600927 BEGAINQ9BUH8 593 aa13.68□□□□□ -0.22
ZNF548-211ENST00000600927 CFHR5Q9BXR6 569 aa13.68□□□□□ -0.22
ZNF548-211ENST00000600927 ZNF341Q9BYN7 854 aa13.68□□□□□ -0.22
ZNF548-211ENST00000600927 RNF186Q9NXI6 227 aa13.68□□□□□ -0.22
ZNF548-211ENST00000600927 CHMP5Q9NZZ3 219 aa13.68□□□□□ -0.22
ZNF548-211ENST00000600927 TESPA1A2RU30 521 aaPredicted RBP13.67□□□□□ -0.22
ZNF548-211ENST00000600927 SPDYE5A6NIY4 337 aa13.67□□□□□ -0.22
ZNF548-211ENST00000600927 HSPD1P10809 573 aaKnown RBP13.67□□□□□ -0.22
ZNF548-211ENST00000600927 GNAT2P19087 354 aa13.67□□□□□ -0.22
ZNF548-211ENST00000600927 ANKRD1Q15327 319 aa13.67□□□□□ -0.22
ZNF548-211ENST00000600927 ALX1Q15699 326 aa13.67□□□□□ -0.22
ZNF548-211ENST00000600927 NOL9Q5SY16 702 aaKnown RBP13.67□□□□□ -0.22
ZNF548-211ENST00000600927 RASEFQ8IZ41 740 aa13.67□□□□□ -0.22
ZNF548-211ENST00000600927 SH3RF3Q8TEJ3 882 aaPredicted RBP13.67□□□□□ -0.22
ZNF548-211ENST00000600927 SLC10A4Q96EP9 437 aa13.67□□□□□ -0.22
ZNF548-211ENST00000600927 ZSCAN31Q96LW9 406 aaPredicted RBP13.67□□□□□ -0.22
ZNF548-211ENST00000600927 TTC14Q96N46 770 aa13.67□□□□□ -0.22
ZNF548-211ENST00000600927 WRNIP1Q96S55 665 aa13.67□□□□□ -0.22
ZNF548-211ENST00000600927 OSBPL5Q9H0X9 879 aaPredicted RBP13.67□□□□□ -0.22
ZNF548-211ENST00000600927 AATFQ9NY61 560 aaKnown RBP eCLIP13.67□□□□□ -0.22
ZNF548-211ENST00000600927 CYP46A1Q9Y6A2 500 aa13.67□□□□□ -0.22
ZNF548-211ENST00000600927 ZMYM6O95789 1325 aa13.66□□□□□ -0.22
ZNF548-211ENST00000600927 TCRBV5S4A2TA0A5A2 114 aa13.66□□□□□ -0.22
ZNF548-211ENST00000600927 PHF20L1A8MW92 1017 aa13.66□□□□□ -0.22
ZNF548-211ENST00000600927 IDH1O75874 414 aaKnown RBP13.66□□□□□ -0.22
ZNF548-211ENST00000600927 BAG3O95817 575 aa13.66□□□□□ -0.22
ZNF548-211ENST00000600927 PDE6AP16499 860 aa13.66□□□□□ -0.22
ZNF548-211ENST00000600927 PLCG2P16885 1265 aa13.66□□□□□ -0.22
ZNF548-211ENST00000600927 DDIT3P35638 169 aa13.66□□□□□ -0.22
ZNF548-211ENST00000600927 SREBF2Q12772 1141 aa13.66□□□□□ -0.22
ZNF548-211ENST00000600927 MKRN3Q13064 507 aaKnown RBP13.66□□□□□ -0.22
ZNF548-211ENST00000600927 PICALMQ13492 652 aa13.66□□□□□ -0.22
ZNF548-211ENST00000600927 CUL4AQ13619 759 aa13.66□□□□□ -0.22
ZNF548-211ENST00000600927 RUFY3Q7L099 469 aa13.66□□□□□ -0.22
ZNF548-211ENST00000600927 MIGA2Q7L4E1 593 aa13.66□□□□□ -0.22
ZNF548-211ENST00000600927 TEX11Q8IYF3 940 aa13.66□□□□□ -0.22
ZNF548-211ENST00000600927 OPTNQ96CV9 577 aa13.66□□□□□ -0.22
ZNF548-211ENST00000600927 SEC62Q99442 399 aaKnown RBP13.66□□□□□ -0.22
ZNF548-211ENST00000600927 ELP3Q9H9T3 547 aa13.66□□□□□ -0.22
ZNF548-211ENST00000600927 FLT1P17948 1338 aa13.65□□□□□ -0.22
ZNF548-211ENST00000600927 MANSC4A6NHS7 340 aaPredicted RBP13.65□□□□□ -0.22
ZNF548-211ENST00000600927 TBC1D12O60347 775 aa13.65□□□□□ -0.22
ZNF548-211ENST00000600927 CD2BP2O95400 341 aaKnown RBP13.65□□□□□ -0.22
ZNF548-211ENST00000600927 PDIA4P13667 645 aaKnown RBP13.65□□□□□ -0.22
ZNF548-211ENST00000600927 CYP7A1P22680 504 aa13.65□□□□□ -0.22
ZNF548-211ENST00000600927 INPP5BP32019 993 aa13.65□□□□□ -0.22
ZNF548-211ENST00000600927 CERS3Q8IU89 383 aa13.65□□□□□ -0.22
ZNF548-211ENST00000600927 FBXL16Q8N461 479 aa13.65□□□□□ -0.22
ZNF548-211ENST00000600927 MAGEB6Q8N7X4 407 aa13.65□□□□□ -0.22
ZNF548-211ENST00000600927 CNKSR2Q8WXI2 1034 aa13.65□□□□□ -0.22
ZNF548-211ENST00000600927 ZKSCAN4Q969J2 545 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms