RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 GPR153Q6NV75 609 aa15.31■□□□□ 0.04
HOMER3-211ENST00000599808 SLF2Q8IX21 1173 aa15.31■□□□□ 0.04
HOMER3-211ENST00000599808 MROH7-TTC4A0A0A0MT08 1334 aa15.31■□□□□ 0.04
HOMER3-211ENST00000599808 UNC80Q8N2C7 3258 aa15.31■□□□□ 0.04
HOMER3-211ENST00000599808 GCLCP48506 637 aaPredicted RBP15.3■□□□□ 0.04
HOMER3-211ENST00000599808 HMGCS2P54868 508 aa15.3■□□□□ 0.04
HOMER3-211ENST00000599808 PDS5AQ29RF7 1337 aaKnown RBP15.3■□□□□ 0.04
HOMER3-211ENST00000599808 Q7L0L9 218 aa15.3■□□□□ 0.04
HOMER3-211ENST00000599808 RPTORQ8N122 1335 aa15.3■□□□□ 0.04
HOMER3-211ENST00000599808 DEFB123Q8N688 67 aa15.3■□□□□ 0.04
HOMER3-211ENST00000599808 ZNF384Q8TF68 577 aa15.3■□□□□ 0.04
HOMER3-211ENST00000599808 NBPF3Q9H094 633 aa15.3■□□□□ 0.04
HOMER3-211ENST00000599808 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.3■□□□□ 0.04
HOMER3-211ENST00000599808 GPR75-ASB3A0A0A6YYF3 556 aa15.29■□□□□ 0.04
HOMER3-211ENST00000599808 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
HOMER3-211ENST00000599808 SYN1P17600 705 aa15.29■□□□□ 0.04
HOMER3-211ENST00000599808 MAGEA10P43363 369 aaPredicted RBP15.29■□□□□ 0.04
HOMER3-211ENST00000599808 TIMM10P62072 90 aa15.29■□□□□ 0.04
HOMER3-211ENST00000599808 MECOMQ03112 1051 aa15.29■□□□□ 0.04
HOMER3-211ENST00000599808 RRP1BQ14684 758 aaKnown RBP15.29■□□□□ 0.04
HOMER3-211ENST00000599808 SPTY2D1Q68D10 685 aaPredicted RBP15.29■□□□□ 0.04
HOMER3-211ENST00000599808 ZNF280CQ8ND82 737 aa15.29■□□□□ 0.04
HOMER3-211ENST00000599808 OSBPL5Q9H0X9 879 aaPredicted RBP15.29■□□□□ 0.04
HOMER3-211ENST00000599808 ASCC2Q9H1I8 757 aaPredicted RBP15.29■□□□□ 0.04
HOMER3-211ENST00000599808 HMX1Q9NP08 348 aaPredicted RBP15.29■□□□□ 0.04
HOMER3-211ENST00000599808 SIPA1L1O43166 1804 aa15.29■□□□□ 0.04
HOMER3-211ENST00000599808 LRIT3Q3SXY7 679 aa15.28■□□□□ 0.04
HOMER3-211ENST00000599808 TRIB2Q92519 343 aa15.28■□□□□ 0.04
HOMER3-211ENST00000599808 C11orf49Q9H6J7 331 aa15.28■□□□□ 0.04
HOMER3-211ENST00000599808 COPRSQ9NQ92 184 aa15.28■□□□□ 0.04
HOMER3-211ENST00000599808 OGDHLQ9ULD0 1010 aa15.28■□□□□ 0.04
HOMER3-211ENST00000599808 COL2A1P02458 1487 aaPredicted RBP15.27■□□□□ 0.04
HOMER3-211ENST00000599808 CDK5RAP2Q96SN8 1893 aa15.27■□□□□ 0.04
HOMER3-211ENST00000599808 CAP2P40123 477 aa15.27■□□□□ 0.04
HOMER3-211ENST00000599808 PABPC4Q13310 644 aaKnown RBP eCLIP15.27■□□□□ 0.04
HOMER3-211ENST00000599808 ERICH6Q7L0X2 663 aa15.27■□□□□ 0.04
HOMER3-211ENST00000599808 TDHQ8IZJ6 230 aa15.27■□□□□ 0.04
HOMER3-211ENST00000599808 XAGE2Q96GT9 111 aa15.27■□□□□ 0.04
HOMER3-211ENST00000599808 TBC1D2Q9BYX2 928 aa15.27■□□□□ 0.04
HOMER3-211ENST00000599808 LAMA2P24043 3122 aaKnown RBP15.27■□□□□ 0.03
HOMER3-211ENST00000599808 DNAH12Q6ZR08 3092 aa15.26■□□□□ 0.03
HOMER3-211ENST00000599808 PFASO15067 1338 aa15.26■□□□□ 0.03
HOMER3-211ENST00000599808 A0A1B0GUL7 405 aa15.26■□□□□ 0.03
HOMER3-211ENST00000599808 USP17L5A8MUK1 530 aa15.26■□□□□ 0.03
HOMER3-211ENST00000599808 E9PSI1 815 aa15.26■□□□□ 0.03
HOMER3-211ENST00000599808 ALDH1L2Q3SY69 923 aa15.26■□□□□ 0.03
HOMER3-211ENST00000599808 SH3D19Q5HYK7 790 aa15.26■□□□□ 0.03
HOMER3-211ENST00000599808 MAP3K21Q5TCX8 1036 aa15.26■□□□□ 0.03
HOMER3-211ENST00000599808 MORF4L1Q9UBU8 362 aa15.26■□□□□ 0.03
HOMER3-211ENST00000599808 STXBP5LQ9Y2K9 1186 aa15.26■□□□□ 0.03
HOMER3-211ENST00000599808 FRMPD3Q5JV73 1810 aa15.26■□□□□ 0.03
HOMER3-211ENST00000599808 PEX10O60683 326 aa15.25■□□□□ 0.03
HOMER3-211ENST00000599808 CYP2B6P20813 491 aa15.25■□□□□ 0.03
HOMER3-211ENST00000599808 TFCP2Q12800 502 aa15.25■□□□□ 0.03
HOMER3-211ENST00000599808 NSUN4Q96CB9 384 aaKnown RBP15.25■□□□□ 0.03
HOMER3-211ENST00000599808 SMC4Q9NTJ3 1288 aa15.25■□□□□ 0.03
HOMER3-211ENST00000599808 MTMR10Q9NXD2 777 aa15.25■□□□□ 0.03
HOMER3-211ENST00000599808 MAP4K4O95819 1239 aaPredicted RBP15.24■□□□□ 0.03
HOMER3-211ENST00000599808 PRKAR2AP13861 404 aaKnown RBP15.24■□□□□ 0.03
HOMER3-211ENST00000599808 SLFN5Q08AF3 891 aa15.24■□□□□ 0.03
HOMER3-211ENST00000599808 MVPQ14764 893 aaKnown RBP15.24■□□□□ 0.03
HOMER3-211ENST00000599808 PI16Q6UXB8 463 aa15.24■□□□□ 0.03
HOMER3-211ENST00000599808 TBC1D9Q6ZT07 1266 aa15.24■□□□□ 0.03
HOMER3-211ENST00000599808 UBE2OQ9C0C9 1292 aaKnown RBP15.24■□□□□ 0.03
HOMER3-211ENST00000599808 HMG20BQ9P0W2 317 aa15.24■□□□□ 0.03
HOMER3-211ENST00000599808 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.24■□□□□ 0.03
HOMER3-211ENST00000599808 FOCADQ5VW36 1801 aa15.24■□□□□ 0.03
HOMER3-211ENST00000599808 MYO5AQ9Y4I1 1855 aaKnown RBP15.23■□□□□ 0.03
HOMER3-211ENST00000599808 LDHCP07864 332 aa15.23■□□□□ 0.03
HOMER3-211ENST00000599808 IRX3P78415 501 aaPredicted RBP15.23■□□□□ 0.03
HOMER3-211ENST00000599808 GSTO1P78417 241 aa15.23■□□□□ 0.03
HOMER3-211ENST00000599808 MTMR2Q13614 643 aa15.23■□□□□ 0.03
HOMER3-211ENST00000599808 SPATA5Q8NB90 893 aa15.23■□□□□ 0.03
HOMER3-211ENST00000599808 P2RX7Q99572 595 aaKnown RBP15.23■□□□□ 0.03
HOMER3-211ENST00000599808 MEIS3Q99687 375 aa15.23■□□□□ 0.03
HOMER3-211ENST00000599808 NUDT12Q9BQG2 462 aa15.23■□□□□ 0.03
HOMER3-211ENST00000599808 WDR18Q9BV38 432 aa15.23■□□□□ 0.03
HOMER3-211ENST00000599808 AS3MTQ9HBK9 375 aa15.23■□□□□ 0.03
HOMER3-211ENST00000599808 TXNRD2Q9NNW7 524 aa15.23■□□□□ 0.03
HOMER3-211ENST00000599808 HERC5Q9UII4 1024 aaKnown RBP15.23■□□□□ 0.03
HOMER3-211ENST00000599808 HDAC5Q9UQL6 1122 aa15.23■□□□□ 0.03
HOMER3-211ENST00000599808 AKAP2Q9Y2D5 859 aa15.23■□□□□ 0.03
HOMER3-211ENST00000599808 COL6A1P12109 1028 aa15.22■□□□□ 0.03
HOMER3-211ENST00000599808 XRCC5P13010 732 aaKnown RBP15.22■□□□□ 0.03
HOMER3-211ENST00000599808 HOXA7P31268 230 aaPredicted RBP15.22■□□□□ 0.03
HOMER3-211ENST00000599808 BACE1P56817 501 aa15.22■□□□□ 0.03
HOMER3-211ENST00000599808 JAG1P78504 1218 aa15.22■□□□□ 0.03
HOMER3-211ENST00000599808 CACNB2Q08289 660 aaPredicted RBP15.22■□□□□ 0.03
HOMER3-211ENST00000599808 TEX11Q8IYF3 940 aa15.22■□□□□ 0.03
HOMER3-211ENST00000599808 NEUROD6Q96NK8 337 aa15.22■□□□□ 0.03
HOMER3-211ENST00000599808 NOB1Q9ULX3 412 aaKnown RBP15.22■□□□□ 0.03
HOMER3-211ENST00000599808 HERVK_113P62684 666 aa15.21■□□□□ 0.03
HOMER3-211ENST00000599808 LRRC26Q2I0M4 334 aa15.21■□□□□ 0.03
HOMER3-211ENST00000599808 GPRC5AQ8NFJ5 357 aa15.21■□□□□ 0.03
HOMER3-211ENST00000599808 SH3RF3Q8TEJ3 882 aaPredicted RBP15.21■□□□□ 0.03
HOMER3-211ENST00000599808 SOCS4Q8WXH5 440 aa15.21■□□□□ 0.03
HOMER3-211ENST00000599808 USP6NLQ92738 828 aa15.21■□□□□ 0.03
HOMER3-211ENST00000599808 TMOD4Q9NZQ9 345 aa15.21■□□□□ 0.03
HOMER3-211ENST00000599808 RAI14Q9P0K7 980 aa15.21■□□□□ 0.03
HOMER3-211ENST00000599808 MAST2Q6P0Q8 1798 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms