RNA–Protein interactions for RNA: ENST00000598474.3

SOX2-OT-229, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 515 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-229ENST00000598474 ZMYM1Q5SVZ6 1142 aa16.35■□□□□ 0.21
SOX2-OT-229ENST00000598474 OTUD5Q96G74 571 aa16.35■□□□□ 0.21
SOX2-OT-229ENST00000598474 STRBPQ96SI9 672 aaKnown RBP16.35■□□□□ 0.21
SOX2-OT-229ENST00000598474 SEC62Q99442 399 aaKnown RBP16.35■□□□□ 0.21
SOX2-OT-229ENST00000598474 HERC5Q9UII4 1024 aaKnown RBP16.35■□□□□ 0.21
SOX2-OT-229ENST00000598474 DDX60LQ5H9U9 1706 aaKnown RBP16.35■□□□□ 0.21
SOX2-OT-229ENST00000598474 PCNTO95613 3336 aa16.35■□□□□ 0.21
SOX2-OT-229ENST00000598474 SIPA1L1O43166 1804 aa16.34■□□□□ 0.21
SOX2-OT-229ENST00000598474 CDK5RAP2Q96SN8 1893 aa16.34■□□□□ 0.21
SOX2-OT-229ENST00000598474 FOXN1O15353 648 aa16.34■□□□□ 0.21
SOX2-OT-229ENST00000598474 NEFLP07196 543 aa16.34■□□□□ 0.21
SOX2-OT-229ENST00000598474 EVX2Q03828 476 aa16.34■□□□□ 0.21
SOX2-OT-229ENST00000598474 RRP1BQ14684 758 aaKnown RBP16.34■□□□□ 0.21
SOX2-OT-229ENST00000598474 ERO1BQ86YB8 467 aa16.34■□□□□ 0.21
SOX2-OT-229ENST00000598474 SLC4A4Q9Y6R1 1079 aa16.34■□□□□ 0.21
SOX2-OT-229ENST00000598474 TRIM6-TRIM34B2RNG4 842 aa16.33■□□□□ 0.2
SOX2-OT-229ENST00000598474 GPAA1O43292 621 aa16.33■□□□□ 0.2
SOX2-OT-229ENST00000598474 CTNND1O60716 968 aaKnown RBP16.33■□□□□ 0.2
SOX2-OT-229ENST00000598474 PLCD1P51178 756 aa16.33■□□□□ 0.2
SOX2-OT-229ENST00000598474 CENPQQ7L2Z9 268 aaPredicted RBP16.33■□□□□ 0.2
SOX2-OT-229ENST00000598474 FOXP4Q8IVH2 680 aaPredicted RBP16.33■□□□□ 0.2
SOX2-OT-229ENST00000598474 SCYL3Q8IZE3 742 aa16.33■□□□□ 0.2
SOX2-OT-229ENST00000598474 ATP8A2Q9NTI2 1148 aa16.33■□□□□ 0.2
SOX2-OT-229ENST00000598474 MCM9Q9NXL9 1143 aa16.33■□□□□ 0.2
SOX2-OT-229ENST00000598474 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.33■□□□□ 0.2
SOX2-OT-229ENST00000598474 MANSC4A6NHS7 340 aaPredicted RBP16.32■□□□□ 0.2
SOX2-OT-229ENST00000598474 POLR3DP05423 398 aaPredicted RBP16.32■□□□□ 0.2
SOX2-OT-229ENST00000598474 CYP2D6P10635 497 aa16.32■□□□□ 0.2
SOX2-OT-229ENST00000598474 PTPRAP18433 802 aa16.32■□□□□ 0.2
SOX2-OT-229ENST00000598474 TM4SF4P48230 202 aa16.32■□□□□ 0.2
SOX2-OT-229ENST00000598474 PPATQ06203 517 aa16.32■□□□□ 0.2
SOX2-OT-229ENST00000598474 SREBF2Q12772 1141 aa16.32■□□□□ 0.2
SOX2-OT-229ENST00000598474 PPIL2Q13356 520 aa16.32■□□□□ 0.2
SOX2-OT-229ENST00000598474 TTC6Q86TZ1 520 aa16.32■□□□□ 0.2
SOX2-OT-229ENST00000598474 REM2Q8IYK8 340 aaPredicted RBP16.32■□□□□ 0.2
SOX2-OT-229ENST00000598474 CRACR2BQ8N4Y2 399 aaPredicted RBP16.32■□□□□ 0.2
SOX2-OT-229ENST00000598474 RILPL2Q969X0 211 aa16.32■□□□□ 0.2
SOX2-OT-229ENST00000598474 MS4A4AQ96JQ5 239 aa16.32■□□□□ 0.2
SOX2-OT-229ENST00000598474 BEGAINQ9BUH8 593 aa16.32■□□□□ 0.2
SOX2-OT-229ENST00000598474 EHD4Q9H223 541 aa16.32■□□□□ 0.2
SOX2-OT-229ENST00000598474 GSG1L2A8MUP6 293 aa16.31■□□□□ 0.2
SOX2-OT-229ENST00000598474 IRF6O14896 467 aa16.31■□□□□ 0.2
SOX2-OT-229ENST00000598474 GSPT1P15170 499 aaKnown RBP16.31■□□□□ 0.2
SOX2-OT-229ENST00000598474 JAG1P78504 1218 aa16.31■□□□□ 0.2
SOX2-OT-229ENST00000598474 SHROOM1Q2M3G4 852 aaPredicted RBP16.31■□□□□ 0.2
SOX2-OT-229ENST00000598474 CCDC84Q86UT8 332 aaPredicted RBP16.31■□□□□ 0.2
SOX2-OT-229ENST00000598474 TRIM34Q9BYJ4 488 aa16.31■□□□□ 0.2
SOX2-OT-229ENST00000598474 PICK1Q9NRD5 415 aa16.31■□□□□ 0.2
SOX2-OT-229ENST00000598474 RNF186Q9NXI6 227 aa16.31■□□□□ 0.2
SOX2-OT-229ENST00000598474 SERPINB13Q9UIV8 391 aa16.31■□□□□ 0.2
SOX2-OT-229ENST00000598474 TSKSQ9UJT2 592 aa16.31■□□□□ 0.2
SOX2-OT-229ENST00000598474 MYH7P12883 1935 aa16.31■□□□□ 0.2
SOX2-OT-229ENST00000598474 CYP2D7A0A087X1C5 515 aa16.3■□□□□ 0.2
SOX2-OT-229ENST00000598474 A0A0D9SFI3 127 aa16.3■□□□□ 0.2
SOX2-OT-229ENST00000598474 TESPA1A2RU30 521 aaPredicted RBP16.3■□□□□ 0.2
SOX2-OT-229ENST00000598474 SMIM22K7EJ46 135 aa16.3■□□□□ 0.2
SOX2-OT-229ENST00000598474 CAP2P40123 477 aa16.3■□□□□ 0.2
SOX2-OT-229ENST00000598474 GABPAQ06546 454 aa16.3■□□□□ 0.2
SOX2-OT-229ENST00000598474 TTC22Q5TAA0 569 aa16.3■□□□□ 0.2
SOX2-OT-229ENST00000598474 CCDC129Q6ZRS4 1044 aa16.3■□□□□ 0.2
SOX2-OT-229ENST00000598474 FAM227BQ96M60 508 aa16.3■□□□□ 0.2
SOX2-OT-229ENST00000598474 PTPN18Q99952 460 aa16.3■□□□□ 0.2
SOX2-OT-229ENST00000598474 EPB41L4AQ9HCS5 686 aaPredicted RBP16.3■□□□□ 0.2
SOX2-OT-229ENST00000598474 NAV1Q8NEY1 1877 aa16.3■□□□□ 0.2
SOX2-OT-229ENST00000598474 USP17L12C9JPN9 530 aa16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 USP17L21D6R901 530 aa16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 IGF2BP3O00425 579 aaKnown RBP eCLIP16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 CA12O43570 354 aa16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 TRPA1O75762 1119 aa16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 HSPA8P11142 646 aaKnown RBP16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 SHMT1P34896 483 aa16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 CTCFP49711 727 aaPredicted RBP16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 GTF2A2P52657 109 aa16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 INHBEP58166 350 aa16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 NMIQ13287 307 aaPredicted RBP16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 TATDN1Q6P1N9 297 aa16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 CTR9Q6PD62 1173 aa16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 SKAP1Q86WV1 359 aa16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 TICAM2Q86XR7 235 aa16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 IFNL1Q8IU54 200 aa16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 BRI3BPQ8WY22 251 aa16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 CCDC136Q96JN2 1154 aa16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 SAGE1Q9NXZ1 904 aa16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 KCNH4Q9UQ05 1017 aa16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 ZHX2Q9Y6X8 837 aa16.29■□□□□ 0.2
SOX2-OT-229ENST00000598474 AK9Q5TCS8 1911 aa16.28■□□□□ 0.2
SOX2-OT-229ENST00000598474 CCL15-CCL14A0A0B4J2E2 113 aa16.28■□□□□ 0.2
SOX2-OT-229ENST00000598474 FOXP2O15409 715 aa16.28■□□□□ 0.2
SOX2-OT-229ENST00000598474 GDF11O95390 407 aa16.28■□□□□ 0.2
SOX2-OT-229ENST00000598474 GNAT2P19087 354 aa16.28■□□□□ 0.2
SOX2-OT-229ENST00000598474 SDSP20132 328 aa16.28■□□□□ 0.2
SOX2-OT-229ENST00000598474 SNAPC2Q13487 334 aa16.28■□□□□ 0.2
SOX2-OT-229ENST00000598474 CCL15Q16663 113 aa16.28■□□□□ 0.2
SOX2-OT-229ENST00000598474 C12orf60Q5U649 245 aa16.28■□□□□ 0.2
SOX2-OT-229ENST00000598474 GIMAP6Q6P9H5 292 aa16.28■□□□□ 0.2
SOX2-OT-229ENST00000598474 SLC44A5Q8NCS7 719 aa16.28■□□□□ 0.2
SOX2-OT-229ENST00000598474 DYNLL2Q96FJ2 89 aa16.28■□□□□ 0.2
SOX2-OT-229ENST00000598474 DDRGK1Q96HY6 314 aa16.28■□□□□ 0.2
SOX2-OT-229ENST00000598474 HELLSQ9NRZ9 838 aa16.28■□□□□ 0.2
SOX2-OT-229ENST00000598474 AFG3L2Q9Y4W6 797 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms