RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 C12orf60Q5U649 245 aa26.39■■□□□ 1.82
CHMP2A-204ENST00000597848 SERPINB13Q9UIV8 391 aa26.39■■□□□ 1.82
CHMP2A-204ENST00000597848 FOCADQ5VW36 1801 aa26.39■■□□□ 1.81
CHMP2A-204ENST00000597848 FAM196BA6NMK8 535 aa26.38■■□□□ 1.81
CHMP2A-204ENST00000597848 UBE2Q2LH0YL09 131 aa26.38■■□□□ 1.81
CHMP2A-204ENST00000597848 FGAP02671 866 aa26.38■■□□□ 1.81
CHMP2A-204ENST00000597848 DSCC1Q9BVC3 393 aa26.38■■□□□ 1.81
CHMP2A-204ENST00000597848 HERC5Q9UII4 1024 aaKnown RBP26.38■■□□□ 1.81
CHMP2A-204ENST00000597848 ABT1Q9ULW3 272 aaKnown RBP26.38■■□□□ 1.81
CHMP2A-204ENST00000597848 TBC1D12O60347 775 aa26.37■■□□□ 1.81
CHMP2A-204ENST00000597848 EVX2Q03828 476 aa26.37■■□□□ 1.81
CHMP2A-204ENST00000597848 EHD4Q9H223 541 aa26.37■■□□□ 1.81
CHMP2A-204ENST00000597848 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.37■■□□□ 1.81
CHMP2A-204ENST00000597848 NAV1Q8NEY1 1877 aa26.36■■□□□ 1.81
CHMP2A-204ENST00000597848 MYH1P12882 1939 aa26.36■■□□□ 1.81
CHMP2A-204ENST00000597848 MAP3K10Q02779 954 aa26.36■■□□□ 1.81
CHMP2A-204ENST00000597848 PTH1RQ03431 593 aa26.36■■□□□ 1.81
CHMP2A-204ENST00000597848 DYNLL2Q96FJ2 89 aa26.36■■□□□ 1.81
CHMP2A-204ENST00000597848 ANO2Q9NQ90 1003 aa26.36■■□□□ 1.81
CHMP2A-204ENST00000597848 HUNKP57058 714 aa26.35■■□□□ 1.81
CHMP2A-204ENST00000597848 STK11IPQ8N1F8 1099 aa26.35■■□□□ 1.81
CHMP2A-204ENST00000597848 KLRG1Q96E93 195 aa26.35■■□□□ 1.81
CHMP2A-204ENST00000597848 WRNIP1Q96S55 665 aa26.35■■□□□ 1.81
CHMP2A-204ENST00000597848 CTNNA3Q9UI47 895 aa26.35■■□□□ 1.81
CHMP2A-204ENST00000597848 TRPM7Q96QT4 1865 aa26.34■■□□□ 1.81
CHMP2A-204ENST00000597848 SMIM22K7EJ46 135 aa26.34■■□□□ 1.81
CHMP2A-204ENST00000597848 MAP3K9P80192 1104 aa26.34■■□□□ 1.81
CHMP2A-204ENST00000597848 PPARAQ07869 468 aa26.34■■□□□ 1.81
CHMP2A-204ENST00000597848 METTL16Q86W50 562 aaKnown RBP26.34■■□□□ 1.81
CHMP2A-204ENST00000597848 CREBZFQ9NS37 354 aa26.34■■□□□ 1.81
CHMP2A-204ENST00000597848 BAZ2AQ9UIF9 1905 aaKnown RBP26.33■■□□□ 1.81
CHMP2A-204ENST00000597848 SLC3A2P08195 630 aaKnown RBP26.33■■□□□ 1.81
CHMP2A-204ENST00000597848 MAP3K11Q16584 847 aa26.33■■□□□ 1.81
CHMP2A-204ENST00000597848 DNAJC18Q9H819 358 aa26.33■■□□□ 1.81
CHMP2A-204ENST00000597848 TLL2Q9Y6L7 1015 aa26.33■■□□□ 1.81
CHMP2A-204ENST00000597848 SAPCD2Q86UD0 394 aa26.32■■□□□ 1.8
CHMP2A-204ENST00000597848 ANKRD13AQ8IZ07 590 aa26.32■■□□□ 1.8
CHMP2A-204ENST00000597848 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.32■■□□□ 1.8
CHMP2A-204ENST00000597848 SWAP70Q9UH65 585 aa26.32■■□□□ 1.8
CHMP2A-204ENST00000597848 ZNF112Q9UJU3 913 aa26.32■■□□□ 1.8
CHMP2A-204ENST00000597848 U3KPZ7 1027 aaPredicted RBP26.32■■□□□ 1.8
CHMP2A-204ENST00000597848 ZMYM6O95789 1325 aa26.32■■□□□ 1.8
CHMP2A-204ENST00000597848 PAPPA2Q9BXP8 1791 aa26.31■■□□□ 1.8
CHMP2A-204ENST00000597848 PHF20L1A8MW92 1017 aa26.31■■□□□ 1.8
CHMP2A-204ENST00000597848 HSPA6P17066 643 aa26.31■■□□□ 1.8
CHMP2A-204ENST00000597848 INPP5BP32019 993 aa26.31■■□□□ 1.8
CHMP2A-204ENST00000597848 HAND2P61296 217 aa26.31■■□□□ 1.8
CHMP2A-204ENST00000597848 CTDSPL2Q05D32 466 aa26.31■■□□□ 1.8
CHMP2A-204ENST00000597848 GABPAQ06546 454 aa26.31■■□□□ 1.8
CHMP2A-204ENST00000597848 LDLRAD1Q5T700 205 aa26.31■■□□□ 1.8
CHMP2A-204ENST00000597848 SLC44A5Q8NCS7 719 aa26.31■■□□□ 1.8
CHMP2A-204ENST00000597848 ZKSCAN4Q969J2 545 aaPredicted RBP26.31■■□□□ 1.8
CHMP2A-204ENST00000597848 LSG1Q9H089 658 aaKnown RBP26.31■■□□□ 1.8
CHMP2A-204ENST00000597848 CSADQ9Y600 493 aa26.31■■□□□ 1.8
CHMP2A-204ENST00000597848 ZNF213O14771 459 aa26.3■■□□□ 1.8
CHMP2A-204ENST00000597848 CDK8P49336 464 aa26.3■■□□□ 1.8
CHMP2A-204ENST00000597848 IMMTQ16891 758 aaKnown RBP26.3■■□□□ 1.8
CHMP2A-204ENST00000597848 C16orf86Q6ZW13 317 aa26.3■■□□□ 1.8
CHMP2A-204ENST00000597848 MAP4K1Q92918 833 aa26.3■■□□□ 1.8
CHMP2A-204ENST00000597848 TAOK2Q9UL54 1235 aa26.3■■□□□ 1.8
CHMP2A-204ENST00000597848 DDX60LQ5H9U9 1706 aaKnown RBP26.3■■□□□ 1.8
CHMP2A-204ENST00000597848 CTNND1O60716 968 aaKnown RBP26.29■■□□□ 1.8
CHMP2A-204ENST00000597848 SHMT1P34896 483 aa26.29■■□□□ 1.8
CHMP2A-204ENST00000597848 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.29■■□□□ 1.8
CHMP2A-204ENST00000597848 SLC10A4Q96EP9 437 aa26.29■■□□□ 1.8
CHMP2A-204ENST00000597848 CLMNQ96JQ2 1002 aa26.29■■□□□ 1.8
CHMP2A-204ENST00000597848 MKNK2Q9HBH9 465 aa26.29■■□□□ 1.8
CHMP2A-204ENST00000597848 REC8O95072 547 aa26.28■■□□□ 1.8
CHMP2A-204ENST00000597848 HTRA3P83110 453 aa26.28■■□□□ 1.8
CHMP2A-204ENST00000597848 PDE4BQ07343 736 aa26.28■■□□□ 1.8
CHMP2A-204ENST00000597848 VGLL4Q14135 290 aa26.28■■□□□ 1.8
CHMP2A-204ENST00000597848 CERKLQ49MI3 558 aaPredicted RBP26.28■■□□□ 1.8
CHMP2A-204ENST00000597848 TATDN1Q6P1N9 297 aa26.28■■□□□ 1.8
CHMP2A-204ENST00000597848 PAXIP1Q6ZW49 1069 aaPredicted RBP26.28■■□□□ 1.8
CHMP2A-204ENST00000597848 ZNF287Q9HBT7 754 aa26.28■■□□□ 1.8
CHMP2A-204ENST00000597848 ANAPC4Q9UJX5 808 aa26.28■■□□□ 1.8
CHMP2A-204ENST00000597848 RBM8AQ9Y5S9 174 aaKnown RBP26.28■■□□□ 1.8
CHMP2A-204ENST00000597848 UNCXA6NJT0 531 aa26.27■■□□□ 1.8
CHMP2A-204ENST00000597848 GDF11O95390 407 aa26.27■■□□□ 1.8
CHMP2A-204ENST00000597848 CAP2P40123 477 aa26.27■■□□□ 1.8
CHMP2A-204ENST00000597848 RRP1BQ14684 758 aaKnown RBP26.27■■□□□ 1.8
CHMP2A-204ENST00000597848 ELP3Q9H9T3 547 aa26.27■■□□□ 1.8
CHMP2A-204ENST00000597848 SIPA1L1O43166 1804 aa26.26■■□□□ 1.79
CHMP2A-204ENST00000597848 ROBO3Q96MS0 1386 aa26.26■■□□□ 1.79
CHMP2A-204ENST00000597848 PRDM1O75626 825 aa26.26■■□□□ 1.79
CHMP2A-204ENST00000597848 ZNF157P51786 506 aaPredicted RBP26.26■■□□□ 1.79
CHMP2A-204ENST00000597848 DEFB115Q30KQ5 88 aa26.26■■□□□ 1.79
CHMP2A-204ENST00000597848 RGMBQ6NW40 437 aa26.26■■□□□ 1.79
CHMP2A-204ENST00000597848 SCYL3Q8IZE3 742 aa26.26■■□□□ 1.79
CHMP2A-204ENST00000597848 PICK1Q9NRD5 415 aa26.26■■□□□ 1.79
CHMP2A-204ENST00000597848 ZNF444Q8N0Y2 327 aaPredicted RBP26.25■■□□□ 1.79
CHMP2A-204ENST00000597848 CABP5Q9NP86 173 aa26.25■■□□□ 1.79
CHMP2A-204ENST00000597848 INCENPQ9NQS7 918 aa26.25■■□□□ 1.79
CHMP2A-204ENST00000597848 TOMM22Q9NS69 142 aa26.25■■□□□ 1.79
CHMP2A-204ENST00000597848 SNCAIPQ9Y6H5 919 aa26.25■■□□□ 1.79
CHMP2A-204ENST00000597848 MPHOSPH10O00566 681 aaKnown RBP26.24■■□□□ 1.79
CHMP2A-204ENST00000597848 ABCB5Q2M3G0 1257 aa26.24■■□□□ 1.79
CHMP2A-204ENST00000597848 NOL9Q5SY16 702 aaKnown RBP26.24■■□□□ 1.79
CHMP2A-204ENST00000597848 MFSD6Q6ZSS7 791 aa26.24■■□□□ 1.79
CHMP2A-204ENST00000597848 HHIPL1Q96JK4 782 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms