RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 PICALMQ13492 652 aa13.65□□□□□ -0.22
ZNF548-207ENST00000597400 RRP1BQ14684 758 aaKnown RBP13.65□□□□□ -0.22
ZNF548-207ENST00000597400 MAP3K21Q5TCX8 1036 aa13.65□□□□□ -0.22
ZNF548-207ENST00000597400 ZSCAN29Q8IWY8 852 aaPredicted RBP13.65□□□□□ -0.22
ZNF548-207ENST00000597400 ZNF384Q8TF68 577 aa13.65□□□□□ -0.22
ZNF548-207ENST00000597400 HMX1Q9NP08 348 aaPredicted RBP13.65□□□□□ -0.22
ZNF548-207ENST00000597400 LRRFIP2Q9Y608 721 aaKnown RBP13.65□□□□□ -0.22
ZNF548-207ENST00000597400 RLFQ13129 1914 aa13.64□□□□□ -0.23
ZNF548-207ENST00000597400 COL6A1P12109 1028 aa13.64□□□□□ -0.23
ZNF548-207ENST00000597400 ADORA1P30542 326 aa13.64□□□□□ -0.23
ZNF548-207ENST00000597400 ATP2B3Q16720 1220 aa13.64□□□□□ -0.23
ZNF548-207ENST00000597400 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.64□□□□□ -0.23
ZNF548-207ENST00000597400 MRPL50Q8N5N7 158 aaKnown RBP13.64□□□□□ -0.23
ZNF548-207ENST00000597400 PROCA1Q8NCQ7 364 aaPredicted RBP13.64□□□□□ -0.23
ZNF548-207ENST00000597400 UBE2OQ9C0C9 1292 aaKnown RBP13.64□□□□□ -0.23
ZNF548-207ENST00000597400 SIL1Q9H173 461 aa13.64□□□□□ -0.23
ZNF548-207ENST00000597400 BTDP43251 543 aa13.63□□□□□ -0.23
ZNF548-207ENST00000597400 HMGCS2P54868 508 aa13.63□□□□□ -0.23
ZNF548-207ENST00000597400 RHBDL3P58872 404 aa13.63□□□□□ -0.23
ZNF548-207ENST00000597400 SPP2Q13103 211 aa13.63□□□□□ -0.23
ZNF548-207ENST00000597400 LRRC26Q2I0M4 334 aa13.63□□□□□ -0.23
ZNF548-207ENST00000597400 ASCC2Q9H1I8 757 aaPredicted RBP13.63□□□□□ -0.23
ZNF548-207ENST00000597400 PNMA3Q9UL41 463 aa13.63□□□□□ -0.23
ZNF548-207ENST00000597400 PRKAR2AP13861 404 aaKnown RBP13.62□□□□□ -0.23
ZNF548-207ENST00000597400 MDM2Q00987 491 aaPredicted RBP13.62□□□□□ -0.23
ZNF548-207ENST00000597400 RASGRF1Q13972 1273 aa13.62□□□□□ -0.23
ZNF548-207ENST00000597400 DENND2AQ9ULE3 1009 aa13.62□□□□□ -0.23
ZNF548-207ENST00000597400 MROH7-TTC4A0A0A0MT08 1334 aa13.62□□□□□ -0.23
ZNF548-207ENST00000597400 POTEB2H3BUK9 544 aa13.61□□□□□ -0.23
ZNF548-207ENST00000597400 CYP2B6P20813 491 aa13.61□□□□□ -0.23
ZNF548-207ENST00000597400 GCLCP48506 637 aaPredicted RBP13.61□□□□□ -0.23
ZNF548-207ENST00000597400 CCDC102BQ68D86 513 aa13.61□□□□□ -0.23
ZNF548-207ENST00000597400 FAM161BQ96MY7 647 aa13.61□□□□□ -0.23
ZNF548-207ENST00000597400 TXNRD2Q9NNW7 524 aa13.61□□□□□ -0.23
ZNF548-207ENST00000597400 MORF4L1Q9UBU8 362 aa13.61□□□□□ -0.23
ZNF548-207ENST00000597400 SEMA3EO15041 775 aa13.6□□□□□ -0.23
ZNF548-207ENST00000597400 TBC1D12O60347 775 aa13.6□□□□□ -0.23
ZNF548-207ENST00000597400 CCND3P30281 292 aaPredicted RBP13.6□□□□□ -0.23
ZNF548-207ENST00000597400 CCL14Q16627 93 aa13.6□□□□□ -0.23
ZNF548-207ENST00000597400 SHROOM1Q2M3G4 852 aaPredicted RBP13.6□□□□□ -0.23
ZNF548-207ENST00000597400 LHX8Q68G74 356 aa13.6□□□□□ -0.23
ZNF548-207ENST00000597400 POTEEQ6S8J3 1075 aa13.6□□□□□ -0.23
ZNF548-207ENST00000597400 DZIP1Q86YF9 867 aaKnown RBP13.6□□□□□ -0.23
ZNF548-207ENST00000597400 ZNF280CQ8ND82 737 aa13.6□□□□□ -0.23
ZNF548-207ENST00000597400 FAM163AQ96GL9 167 aaPredicted RBP13.6□□□□□ -0.23
ZNF548-207ENST00000597400 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.6□□□□□ -0.23
ZNF548-207ENST00000597400 MRS2Q9HD23 443 aa13.6□□□□□ -0.23
ZNF548-207ENST00000597400 PA2G4Q9UQ80 394 aaKnown RBP13.6□□□□□ -0.23
ZNF548-207ENST00000597400 TTC28Q96AY4 2481 aa13.59□□□□□ -0.23
ZNF548-207ENST00000597400 ZBTB22O15209 634 aa13.59□□□□□ -0.23
ZNF548-207ENST00000597400 CIAO1O76071 339 aa13.59□□□□□ -0.23
ZNF548-207ENST00000597400 JAG1P78504 1218 aa13.59□□□□□ -0.23
ZNF548-207ENST00000597400 MECOMQ03112 1051 aa13.59□□□□□ -0.23
ZNF548-207ENST00000597400 CACNB2Q08289 660 aaPredicted RBP13.59□□□□□ -0.23
ZNF548-207ENST00000597400 SH3D19Q5HYK7 790 aa13.59□□□□□ -0.23
ZNF548-207ENST00000597400 OSBPL5Q9H0X9 879 aaPredicted RBP13.59□□□□□ -0.23
ZNF548-207ENST00000597400 GNL3LQ9NVN8 582 aaKnown RBP13.59□□□□□ -0.23
ZNF548-207ENST00000597400 ABCF2Q9UG63 623 aa13.59□□□□□ -0.23
ZNF548-207ENST00000597400 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.59□□□□□ -0.23
ZNF548-207ENST00000597400 PTPRCP08575 1304 aa13.59□□□□□ -0.23
ZNF548-207ENST00000597400 ZNF521Q96K83 1311 aa13.59□□□□□ -0.23
ZNF548-207ENST00000597400 GPR75-ASB3A0A0A6YYF3 556 aa13.58□□□□□ -0.24
ZNF548-207ENST00000597400 CAP2P40123 477 aa13.58□□□□□ -0.24
ZNF548-207ENST00000597400 PI16Q6UXB8 463 aa13.58□□□□□ -0.24
ZNF548-207ENST00000597400 SSH1Q8WYL5 1049 aa13.58□□□□□ -0.24
ZNF548-207ENST00000597400 USP6NLQ92738 828 aa13.58□□□□□ -0.24
ZNF548-207ENST00000597400 PORCNQ9H237 461 aa13.58□□□□□ -0.24
ZNF548-207ENST00000597400 MYH1P12882 1939 aa13.58□□□□□ -0.24
ZNF548-207ENST00000597400 PDS5AQ29RF7 1337 aaKnown RBP13.58□□□□□ -0.24
ZNF548-207ENST00000597400 REV3LO60673 3130 aa13.57□□□□□ -0.24
ZNF548-207ENST00000597400 MTMR2Q13614 643 aa13.57□□□□□ -0.24
ZNF548-207ENST00000597400 FAM109BQ6ICB4 259 aaPredicted RBP13.57□□□□□ -0.24
ZNF548-207ENST00000597400 ZGPATQ8N5A5 531 aaKnown RBP13.57□□□□□ -0.24
ZNF548-207ENST00000597400 P2RX7Q99572 595 aaKnown RBP13.57□□□□□ -0.24
ZNF548-207ENST00000597400 DNAJC18Q9H819 358 aa13.57□□□□□ -0.24
ZNF548-207ENST00000597400 CEP126Q9P2H0 1117 aa13.57□□□□□ -0.24
ZNF548-207ENST00000597400 USP17L5A8MUK1 530 aa13.56□□□□□ -0.24
ZNF548-207ENST00000597400 NPM3O75607 178 aaKnown RBP13.56□□□□□ -0.24
ZNF548-207ENST00000597400 XRCC5P13010 732 aaKnown RBP13.56□□□□□ -0.24
ZNF548-207ENST00000597400 TIMM10P62072 90 aa13.56□□□□□ -0.24
ZNF548-207ENST00000597400 HERVK_113P62684 666 aa13.56□□□□□ -0.24
ZNF548-207ENST00000597400 PABPC4Q13310 644 aaKnown RBP eCLIP13.56□□□□□ -0.24
ZNF548-207ENST00000597400 Q3C1V9 767 aa13.56□□□□□ -0.24
ZNF548-207ENST00000597400 SOCS4Q8WXH5 440 aa13.56□□□□□ -0.24
ZNF548-207ENST00000597400 NUDT12Q9BQG2 462 aa13.56□□□□□ -0.24
ZNF548-207ENST00000597400 RBPJLQ9UBG7 517 aa13.56□□□□□ -0.24
ZNF548-207ENST00000597400 FBXO3Q9UK99 471 aa13.56□□□□□ -0.24
ZNF548-207ENST00000597400 ZNF236Q9UL36 1845 aa13.55□□□□□ -0.24
ZNF548-207ENST00000597400 ZKSCAN1P17029 563 aaPredicted RBP13.55□□□□□ -0.24
ZNF548-207ENST00000597400 IL15P40933 162 aaPredicted RBP13.55□□□□□ -0.24
ZNF548-207ENST00000597400 MORN1Q5T089 497 aa13.55□□□□□ -0.24
ZNF548-207ENST00000597400 NSUN4Q96CB9 384 aaKnown RBP13.55□□□□□ -0.24
ZNF548-207ENST00000597400 FLRT1Q9NZU1 646 aa13.55□□□□□ -0.24
ZNF548-207ENST00000597400 A0A0G2JMZ2 1700 aa13.55□□□□□ -0.24
ZNF548-207ENST00000597400 HOXA7P31268 230 aaPredicted RBP13.54□□□□□ -0.24
ZNF548-207ENST00000597400 BACE1P56817 501 aa13.54□□□□□ -0.24
ZNF548-207ENST00000597400 ERVK-9P63128 1117 aa13.54□□□□□ -0.24
ZNF548-207ENST00000597400 ERVK-24P63145 666 aa13.54□□□□□ -0.24
ZNF548-207ENST00000597400 IRX3P78415 501 aaPredicted RBP13.54□□□□□ -0.24
ZNF548-207ENST00000597400 TBC1D9Q6ZT07 1266 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms