RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 PHF20L1A8MW92 1017 aa17.22■□□□□ 0.35
LIG1-208ENST00000595758 FAM155AB1AL88 458 aaPredicted RBP17.22■□□□□ 0.35
LIG1-208ENST00000595758 SLC10A3P09131 477 aa17.22■□□□□ 0.35
LIG1-208ENST00000595758 INPP5BP32019 993 aa17.22■□□□□ 0.35
LIG1-208ENST00000595758 NMIQ13287 307 aaPredicted RBP17.22■□□□□ 0.35
LIG1-208ENST00000595758 VGLL4Q14135 290 aa17.22■□□□□ 0.35
LIG1-208ENST00000595758 MCMDC2Q4G0Z9 681 aa17.22■□□□□ 0.35
LIG1-208ENST00000595758 RASAL3Q86YV0 1011 aa17.22■□□□□ 0.35
LIG1-208ENST00000595758 CRACR2BQ8N4Y2 399 aaPredicted RBP17.22■□□□□ 0.35
LIG1-208ENST00000595758 DIAPH3Q9NSV4 1193 aa17.22■□□□□ 0.35
LIG1-208ENST00000595758 A0A0D9SFI3 127 aa17.21■□□□□ 0.35
LIG1-208ENST00000595758 GSG1L2A8MUP6 293 aa17.21■□□□□ 0.35
LIG1-208ENST00000595758 PATL2C9JE40 543 aaKnown RBP17.21■□□□□ 0.35
LIG1-208ENST00000595758 AOC2O75106 756 aa17.21■□□□□ 0.35
LIG1-208ENST00000595758 APPP05067 770 aa17.21■□□□□ 0.35
LIG1-208ENST00000595758 PLCD1P51178 756 aa17.21■□□□□ 0.35
LIG1-208ENST00000595758 NOGQ13253 232 aa17.21■□□□□ 0.35
LIG1-208ENST00000595758 GIMAP6Q6P9H5 292 aa17.21■□□□□ 0.35
LIG1-208ENST00000595758 CCDC129Q6ZRS4 1044 aa17.21■□□□□ 0.35
LIG1-208ENST00000595758 METTL16Q86W50 562 aaKnown RBP17.21■□□□□ 0.35
LIG1-208ENST00000595758 ELP3Q9H9T3 547 aa17.21■□□□□ 0.35
LIG1-208ENST00000595758 CEP350Q5VT06 3117 aa17.21■□□□□ 0.34
LIG1-208ENST00000595758 USP17L12C9JPN9 530 aa17.2■□□□□ 0.34
LIG1-208ENST00000595758 USP17L21D6R901 530 aa17.2■□□□□ 0.34
LIG1-208ENST00000595758 CYP2D6P10635 497 aa17.2■□□□□ 0.34
LIG1-208ENST00000595758 MAP2K2P36507 400 aa17.2■□□□□ 0.34
LIG1-208ENST00000595758 AMOTL1Q8IY63 956 aa17.2■□□□□ 0.34
LIG1-208ENST00000595758 NACAP1Q9BZK3 213 aa17.2■□□□□ 0.34
LIG1-208ENST00000595758 EHD4Q9H223 541 aa17.2■□□□□ 0.34
LIG1-208ENST00000595758 SERPINB13Q9UIV8 391 aa17.2■□□□□ 0.34
LIG1-208ENST00000595758 SNCAIPQ9Y6H5 919 aa17.2■□□□□ 0.34
LIG1-208ENST00000595758 CTNND1O60716 968 aaKnown RBP17.19■□□□□ 0.34
LIG1-208ENST00000595758 NOL9Q5SY16 702 aaKnown RBP17.19■□□□□ 0.34
LIG1-208ENST00000595758 SPRYD7Q5W111 196 aa17.19■□□□□ 0.34
LIG1-208ENST00000595758 CWC27Q6UX04 472 aaKnown RBP17.19■□□□□ 0.34
LIG1-208ENST00000595758 WNK4Q96J92 1243 aa17.19■□□□□ 0.34
LIG1-208ENST00000595758 MYH1P12882 1939 aa17.19■□□□□ 0.34
LIG1-208ENST00000595758 TDO2P48775 406 aa17.18■□□□□ 0.34
LIG1-208ENST00000595758 MKRN3Q13064 507 aaKnown RBP17.18■□□□□ 0.34
LIG1-208ENST00000595758 C12orf60Q5U649 245 aa17.18■□□□□ 0.34
LIG1-208ENST00000595758 CTR9Q6PD62 1173 aa17.18■□□□□ 0.34
LIG1-208ENST00000595758 ERO1BQ86YB8 467 aa17.18■□□□□ 0.34
LIG1-208ENST00000595758 IFNL3Q8IZI9 196 aa17.18■□□□□ 0.34
LIG1-208ENST00000595758 JMYQ8N9B5 988 aa17.18■□□□□ 0.34
LIG1-208ENST00000595758 OPTNQ96CV9 577 aa17.18■□□□□ 0.34
LIG1-208ENST00000595758 DNAJC18Q9H819 358 aa17.18■□□□□ 0.34
LIG1-208ENST00000595758 PICK1Q9NRD5 415 aa17.18■□□□□ 0.34
LIG1-208ENST00000595758 CYP2D7A0A087X1C5 515 aa17.17■□□□□ 0.34
LIG1-208ENST00000595758 SPDYE5A6NIY4 337 aa17.17■□□□□ 0.34
LIG1-208ENST00000595758 ZBTB48P10074 688 aaPredicted RBP17.17■□□□□ 0.34
LIG1-208ENST00000595758 MFAP1P55081 439 aaKnown RBP17.17■□□□□ 0.34
LIG1-208ENST00000595758 KIF23Q02241 960 aaPredicted RBP17.17■□□□□ 0.34
LIG1-208ENST00000595758 SBK1Q52WX2 424 aa17.17■□□□□ 0.34
LIG1-208ENST00000595758 BMP2KLQ5H9B9 411 aa17.17■□□□□ 0.34
LIG1-208ENST00000595758 SCYL3Q8IZE3 742 aa17.17■□□□□ 0.34
LIG1-208ENST00000595758 CNKSR2Q8WXI2 1034 aa17.17■□□□□ 0.34
LIG1-208ENST00000595758 ZIC5Q96T25 663 aa17.17■□□□□ 0.34
LIG1-208ENST00000595758 EPB41L4AQ9HCS5 686 aaPredicted RBP17.17■□□□□ 0.34
LIG1-208ENST00000595758 ARPP21Q9UBL0 812 aaPredicted RBP17.17■□□□□ 0.34
LIG1-208ENST00000595758 CCDC171Q6TFL3 1326 aa17.17■□□□□ 0.34
LIG1-208ENST00000595758 NAV1Q8NEY1 1877 aa17.16■□□□□ 0.34
LIG1-208ENST00000595758 MINDY4BA8MYZ0 360 aa17.16■□□□□ 0.34
LIG1-208ENST00000595758 CHMLP26374 656 aa17.16■□□□□ 0.34
LIG1-208ENST00000595758 GJA5P36382 358 aa17.16■□□□□ 0.34
LIG1-208ENST00000595758 CAP2P40123 477 aa17.16■□□□□ 0.34
LIG1-208ENST00000595758 EVX2Q03828 476 aa17.16■□□□□ 0.34
LIG1-208ENST00000595758 GABPAQ06546 454 aa17.16■□□□□ 0.34
LIG1-208ENST00000595758 RRP1BQ14684 758 aaKnown RBP17.16■□□□□ 0.34
LIG1-208ENST00000595758 VPS53Q5VIR6 699 aa17.16■□□□□ 0.34
LIG1-208ENST00000595758 ZNF589Q86UQ0 364 aaPredicted RBP17.16■□□□□ 0.34
LIG1-208ENST00000595758 OTUD5Q96G74 571 aa17.16■□□□□ 0.34
LIG1-208ENST00000595758 NAPBQ9H115 298 aa17.16■□□□□ 0.34
LIG1-208ENST00000595758 TAOK2Q9UL54 1235 aa17.16■□□□□ 0.34
LIG1-208ENST00000595758 OTOFQ9HC10 1997 aa17.16■□□□□ 0.34
LIG1-208ENST00000595758 SIPA1L1O43166 1804 aa17.15■□□□□ 0.34
LIG1-208ENST00000595758 FOXP2O15409 715 aa17.15■□□□□ 0.34
LIG1-208ENST00000595758 PPATQ06203 517 aa17.15■□□□□ 0.34
LIG1-208ENST00000595758 TATDN1Q6P1N9 297 aa17.15■□□□□ 0.34
LIG1-208ENST00000595758 RUFY2Q8WXA3 655 aa17.15■□□□□ 0.34
LIG1-208ENST00000595758 DYNLL2Q96FJ2 89 aa17.15■□□□□ 0.34
LIG1-208ENST00000595758 SWAP70Q9UH65 585 aa17.15■□□□□ 0.34
LIG1-208ENST00000595758 DDX60LQ5H9U9 1706 aaKnown RBP17.15■□□□□ 0.34
LIG1-208ENST00000595758 BAZ2AQ9UIF9 1905 aaKnown RBP17.14■□□□□ 0.33
LIG1-208ENST00000595758 SMIM22K7EJ46 135 aa17.14■□□□□ 0.33
LIG1-208ENST00000595758 HSPD1P10809 573 aaKnown RBP17.14■□□□□ 0.33
LIG1-208ENST00000595758 PTPRAP18433 802 aa17.14■□□□□ 0.33
LIG1-208ENST00000595758 SHMT1P34896 483 aa17.14■□□□□ 0.33
LIG1-208ENST00000595758 MAP2K1Q02750 393 aaPredicted RBP17.14■□□□□ 0.33
LIG1-208ENST00000595758 PPIL2Q13356 520 aa17.14■□□□□ 0.33
LIG1-208ENST00000595758 ALX1Q15699 326 aa17.14■□□□□ 0.33
LIG1-208ENST00000595758 CERKLQ49MI3 558 aaPredicted RBP17.14■□□□□ 0.33
LIG1-208ENST00000595758 REM2Q8IYK8 340 aaPredicted RBP17.14■□□□□ 0.33
LIG1-208ENST00000595758 SLC44A5Q8NCS7 719 aa17.14■□□□□ 0.33
LIG1-208ENST00000595758 ZHX2Q9Y6X8 837 aa17.14■□□□□ 0.33
LIG1-208ENST00000595758 MANSC4A6NHS7 340 aaPredicted RBP17.13■□□□□ 0.33
LIG1-208ENST00000595758 GDF11O95390 407 aa17.13■□□□□ 0.33
LIG1-208ENST00000595758 GINM1Q9NU53 330 aa17.13■□□□□ 0.33
LIG1-208ENST00000595758 IRF6O14896 467 aa17.12■□□□□ 0.33
LIG1-208ENST00000595758 FGAP02671 866 aa17.12■□□□□ 0.33
LIG1-208ENST00000595758 ASNSP08243 561 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms