RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 LRRC26Q2I0M4 334 aa15.87■□□□□ 0.13
SCAF1-202ENST00000595242 BEND3Q5T5X7 828 aa15.87■□□□□ 0.13
SCAF1-202ENST00000595242 ZFPM1Q8IX07 1006 aa15.87■□□□□ 0.13
SCAF1-202ENST00000595242 FRAT1Q92837 279 aaPredicted RBP15.87■□□□□ 0.13
SCAF1-202ENST00000595242 RBM19Q9Y4C8 960 aaKnown RBP15.87■□□□□ 0.13
SCAF1-202ENST00000595242 DAGLAQ9Y4D2 1042 aa15.87■□□□□ 0.13
SCAF1-202ENST00000595242 LTBP2Q14767 1821 aa15.87■□□□□ 0.13
SCAF1-202ENST00000595242 RLBP1P12271 317 aa15.86■□□□□ 0.13
SCAF1-202ENST00000595242 MVPQ14764 893 aaKnown RBP15.86■□□□□ 0.13
SCAF1-202ENST00000595242 TREML2Q5T2D2 321 aa15.86■□□□□ 0.13
SCAF1-202ENST00000595242 TRIB2Q92519 343 aa15.86■□□□□ 0.13
SCAF1-202ENST00000595242 LBHD1Q9BQE6 289 aaPredicted RBP15.86■□□□□ 0.13
SCAF1-202ENST00000595242 PNMA3Q9UL41 463 aa15.86■□□□□ 0.13
SCAF1-202ENST00000595242 COG6Q9Y2V7 657 aa15.86■□□□□ 0.13
SCAF1-202ENST00000595242 ATRNL1Q5VV63 1379 aa15.86■□□□□ 0.13
SCAF1-202ENST00000595242 IPO8O15397 1037 aaKnown RBP15.85■□□□□ 0.13
SCAF1-202ENST00000595242 PRKAR2AP13861 404 aaKnown RBP15.85■□□□□ 0.13
SCAF1-202ENST00000595242 DIXDC1Q155Q3 683 aa15.85■□□□□ 0.13
SCAF1-202ENST00000595242 METTL24Q5JXM2 366 aa15.85■□□□□ 0.13
SCAF1-202ENST00000595242 MAP3K21Q5TCX8 1036 aa15.85■□□□□ 0.13
SCAF1-202ENST00000595242 ATF7IPQ6VMQ6 1270 aa15.85■□□□□ 0.13
SCAF1-202ENST00000595242 ARHGAP45Q92619 1136 aa15.85■□□□□ 0.13
SCAF1-202ENST00000595242 SEMA6BQ9H3T3 888 aa15.85■□□□□ 0.13
SCAF1-202ENST00000595242 USP40Q9NVE5 1235 aa15.85■□□□□ 0.13
SCAF1-202ENST00000595242 C9orf78Q9NZ63 289 aaPredicted RBP15.85■□□□□ 0.13
SCAF1-202ENST00000595242 LRRFIP2Q9Y608 721 aaKnown RBP15.85■□□□□ 0.13
SCAF1-202ENST00000595242 PDE8BO95263 885 aa15.84■□□□□ 0.13
SCAF1-202ENST00000595242 TRIM27P14373 513 aa15.84■□□□□ 0.13
SCAF1-202ENST00000595242 GCLCP48506 637 aaPredicted RBP15.84■□□□□ 0.13
SCAF1-202ENST00000595242 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.84■□□□□ 0.13
SCAF1-202ENST00000595242 TNNQ9UQP3 1299 aa15.84■□□□□ 0.13
SCAF1-202ENST00000595242 NCOR1O75376 2440 aa15.83■□□□□ 0.12
SCAF1-202ENST00000595242 CTNND1O60716 968 aaKnown RBP15.83■□□□□ 0.12
SCAF1-202ENST00000595242 CYP2B6P20813 491 aa15.83■□□□□ 0.12
SCAF1-202ENST00000595242 LRRC24Q50LG9 513 aa15.83■□□□□ 0.12
SCAF1-202ENST00000595242 MRPL50Q8N5N7 158 aaKnown RBP15.83■□□□□ 0.12
SCAF1-202ENST00000595242 VGLL2Q8N8G2 317 aa15.83■□□□□ 0.12
SCAF1-202ENST00000595242 WDR66Q8TBY9 1149 aa15.83■□□□□ 0.12
SCAF1-202ENST00000595242 MYLIPQ8WY64 445 aa15.83■□□□□ 0.12
SCAF1-202ENST00000595242 RAPGEFL1Q9UHV5 662 aa15.83■□□□□ 0.12
SCAF1-202ENST00000595242 MYO9BQ13459 2157 aa15.82■□□□□ 0.12
SCAF1-202ENST00000595242 CCDC84Q86UT8 332 aaPredicted RBP15.82■□□□□ 0.12
SCAF1-202ENST00000595242 KAZALD1Q96I82 304 aa15.82■□□□□ 0.12
SCAF1-202ENST00000595242 TNFRSF10AO00220 468 aa15.81■□□□□ 0.12
SCAF1-202ENST00000595242 SLURP2P0DP57 97 aa15.81■□□□□ 0.12
SCAF1-202ENST00000595242 RGS3P49796 1198 aa15.81■□□□□ 0.12
SCAF1-202ENST00000595242 MAP3K10Q02779 954 aa15.81■□□□□ 0.12
SCAF1-202ENST00000595242 RLFQ13129 1914 aa15.81■□□□□ 0.12
SCAF1-202ENST00000595242 LHX8Q68G74 356 aa15.81■□□□□ 0.12
SCAF1-202ENST00000595242 ZSCAN29Q8IWY8 852 aaPredicted RBP15.81■□□□□ 0.12
SCAF1-202ENST00000595242 PROCA1Q8NCQ7 364 aaPredicted RBP15.81■□□□□ 0.12
SCAF1-202ENST00000595242 NOB1Q9ULX3 412 aaKnown RBP15.81■□□□□ 0.12
SCAF1-202ENST00000595242 DDX19BQ9UMR2 479 aa15.81■□□□□ 0.12
SCAF1-202ENST00000595242 ENTPD3O75355 529 aa15.8■□□□□ 0.12
SCAF1-202ENST00000595242 XRCC5P13010 732 aaKnown RBP15.8■□□□□ 0.12
SCAF1-202ENST00000595242 FOSL2P15408 326 aa15.8■□□□□ 0.12
SCAF1-202ENST00000595242 PRDX5P30044 214 aa15.8■□□□□ 0.12
SCAF1-202ENST00000595242 CACNB2Q08289 660 aaPredicted RBP15.8■□□□□ 0.12
SCAF1-202ENST00000595242 SH3BP5LQ7L8J4 393 aa15.8■□□□□ 0.12
SCAF1-202ENST00000595242 FTSJ3Q8IY81 847 aaKnown RBP15.8■□□□□ 0.12
SCAF1-202ENST00000595242 SUCLG2Q96I99 432 aa15.8■□□□□ 0.12
SCAF1-202ENST00000595242 IFIT1P09914 478 aaKnown RBP15.79■□□□□ 0.12
SCAF1-202ENST00000595242 CCND3P30281 292 aaPredicted RBP15.79■□□□□ 0.12
SCAF1-202ENST00000595242 PABPC4Q13310 644 aaKnown RBP eCLIP15.79■□□□□ 0.12
SCAF1-202ENST00000595242 PUM3Q15397 648 aaKnown RBP15.79■□□□□ 0.12
SCAF1-202ENST00000595242 SHHQ15465 462 aa15.79■□□□□ 0.12
SCAF1-202ENST00000595242 NUDT12Q9BQG2 462 aa15.79■□□□□ 0.12
SCAF1-202ENST00000595242 IDI2Q9BXS1 227 aa15.79■□□□□ 0.12
SCAF1-202ENST00000595242 SENP6Q9GZR1 1112 aaPredicted RBP15.79■□□□□ 0.12
SCAF1-202ENST00000595242 ASCC2Q9H1I8 757 aaPredicted RBP15.79■□□□□ 0.12
SCAF1-202ENST00000595242 TTYH1Q9H313 450 aaPredicted RBP15.79■□□□□ 0.12
SCAF1-202ENST00000595242 DDTLA6NHG4 134 aaPredicted RBP15.78■□□□□ 0.12
SCAF1-202ENST00000595242 LDHBP07195 334 aaKnown RBP15.78■□□□□ 0.12
SCAF1-202ENST00000595242 PLA2G5P39877 138 aa15.78■□□□□ 0.12
SCAF1-202ENST00000595242 SPP2Q13103 211 aa15.78■□□□□ 0.12
SCAF1-202ENST00000595242 TJAP1Q5JTD0 557 aa15.78■□□□□ 0.12
SCAF1-202ENST00000595242 MORF4L1Q9UBU8 362 aa15.78■□□□□ 0.12
SCAF1-202ENST00000595242 PRKAG2Q9UGJ0 569 aa15.78■□□□□ 0.12
SCAF1-202ENST00000595242 ALDH1L1O75891 902 aa15.77■□□□□ 0.12
SCAF1-202ENST00000595242 NBPF7P0C2Y1 421 aaPredicted RBP15.77■□□□□ 0.12
SCAF1-202ENST00000595242 ZKSCAN1P17029 563 aaPredicted RBP15.77■□□□□ 0.12
SCAF1-202ENST00000595242 FGFR2P21802 821 aa15.77■□□□□ 0.12
SCAF1-202ENST00000595242 HMGCS2P54868 508 aa15.77■□□□□ 0.12
SCAF1-202ENST00000595242 TRMT44Q8IYL2 757 aaKnown RBP15.77■□□□□ 0.12
SCAF1-202ENST00000595242 ZNF280CQ8ND82 737 aa15.77■□□□□ 0.12
SCAF1-202ENST00000595242 KLHDC4Q8TBB5 520 aa15.77■□□□□ 0.12
SCAF1-202ENST00000595242 SOCS4Q8WXH5 440 aa15.77■□□□□ 0.12
SCAF1-202ENST00000595242 BICC1Q9H694 974 aaKnown RBP15.77■□□□□ 0.12
SCAF1-202ENST00000595242 IGHDP01880 384 aa15.76■□□□□ 0.11
SCAF1-202ENST00000595242 ATN1P54259 1190 aaPredicted RBP15.76■□□□□ 0.11
SCAF1-202ENST00000595242 SMAD3P84022 425 aaKnown RBP15.76■□□□□ 0.11
SCAF1-202ENST00000595242 C9orf50Q5SZB4 431 aa15.76■□□□□ 0.11
SCAF1-202ENST00000595242 SLC4A10Q6U841 1118 aa15.76■□□□□ 0.11
SCAF1-202ENST00000595242 FAM122AQ96E09 287 aa15.76■□□□□ 0.11
SCAF1-202ENST00000595242 SRCIN1Q9C0H9 1055 aa15.76■□□□□ 0.11
SCAF1-202ENST00000595242 RFX7Q2KHR2 1363 aa15.75■□□□□ 0.11
SCAF1-202ENST00000595242 PEX10O60683 326 aa15.75■□□□□ 0.11
SCAF1-202ENST00000595242 SLC5A1P13866 664 aa15.75■□□□□ 0.11
SCAF1-202ENST00000595242 PICALMQ13492 652 aa15.75■□□□□ 0.11
SCAF1-202ENST00000595242 CCL14Q16627 93 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms