RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 PI4KBQ9UBF8 816 aa18.54■□□□□ 0.56
USE1-206ENST00000595101 COL2A1P02458 1487 aaPredicted RBP18.53■□□□□ 0.56
USE1-206ENST00000595101 TBC1D12O60347 775 aa18.53■□□□□ 0.56
USE1-206ENST00000595101 CYP2D6P10635 497 aa18.53■□□□□ 0.56
USE1-206ENST00000595101 JAG1P78504 1218 aa18.53■□□□□ 0.56
USE1-206ENST00000595101 CERS3Q8IU89 383 aa18.53■□□□□ 0.56
USE1-206ENST00000595101 OSBPL3Q9H4L5 887 aa18.53■□□□□ 0.56
USE1-206ENST00000595101 SPDYE5A6NIY4 337 aa18.53■□□□□ 0.56
USE1-206ENST00000595101 IRF6O14896 467 aa18.53■□□□□ 0.56
USE1-206ENST00000595101 ZBTB48P10074 688 aaPredicted RBP18.53■□□□□ 0.56
USE1-206ENST00000595101 APPBP2Q92624 585 aa18.53■□□□□ 0.56
USE1-206ENST00000595101 MS4A4AQ96JQ5 239 aa18.53■□□□□ 0.56
USE1-206ENST00000595101 STRBPQ96SI9 672 aaKnown RBP18.53■□□□□ 0.56
USE1-206ENST00000595101 RNF186Q9NXI6 227 aa18.53■□□□□ 0.56
USE1-206ENST00000595101 MCM9Q9NXL9 1143 aa18.53■□□□□ 0.56
USE1-206ENST00000595101 CDK5RAP2Q96SN8 1893 aa18.52■□□□□ 0.56
USE1-206ENST00000595101 CYP2D7A0A087X1C5 515 aa18.52■□□□□ 0.55
USE1-206ENST00000595101 TRIM6-TRIM34B2RNG4 842 aa18.52■□□□□ 0.55
USE1-206ENST00000595101 TRPA1O75762 1119 aa18.52■□□□□ 0.55
USE1-206ENST00000595101 ERO1BQ86YB8 467 aa18.52■□□□□ 0.55
USE1-206ENST00000595101 EVI5LQ96CN4 794 aa18.52■□□□□ 0.55
USE1-206ENST00000595101 PTPN18Q99952 460 aa18.52■□□□□ 0.55
USE1-206ENST00000595101 SLC4A4Q9Y6R1 1079 aa18.52■□□□□ 0.55
USE1-206ENST00000595101 TM4SF4P48230 202 aa18.51■□□□□ 0.55
USE1-206ENST00000595101 NOL9Q5SY16 702 aaKnown RBP18.51■□□□□ 0.55
USE1-206ENST00000595101 METTL16Q86W50 562 aaKnown RBP18.51■□□□□ 0.55
USE1-206ENST00000595101 RILPL2Q969X0 211 aa18.51■□□□□ 0.55
USE1-206ENST00000595101 SIPA1L1O43166 1804 aa18.51■□□□□ 0.55
USE1-206ENST00000595101 IGF2BP3O00425 579 aaKnown RBP eCLIP18.5■□□□□ 0.55
USE1-206ENST00000595101 GPAA1O43292 621 aa18.5■□□□□ 0.55
USE1-206ENST00000595101 ZFYP08048 801 aaPredicted RBP18.5■□□□□ 0.55
USE1-206ENST00000595101 PTPRAP18433 802 aa18.5■□□□□ 0.55
USE1-206ENST00000595101 LBX1P52954 281 aa18.5■□□□□ 0.55
USE1-206ENST00000595101 ZMYM1Q5SVZ6 1142 aa18.5■□□□□ 0.55
USE1-206ENST00000595101 CCDC129Q6ZRS4 1044 aa18.5■□□□□ 0.55
USE1-206ENST00000595101 SCYL3Q8IZE3 742 aa18.5■□□□□ 0.55
USE1-206ENST00000595101 BEGAINQ9BUH8 593 aa18.5■□□□□ 0.55
USE1-206ENST00000595101 CTNND1O60716 968 aaKnown RBP18.5■□□□□ 0.55
USE1-206ENST00000595101 POLR3DP05423 398 aaPredicted RBP18.5■□□□□ 0.55
USE1-206ENST00000595101 HLA-DOAP06340 250 aa18.5■□□□□ 0.55
USE1-206ENST00000595101 HSPA8P11142 646 aaKnown RBP18.5■□□□□ 0.55
USE1-206ENST00000595101 FOXP4Q8IVH2 680 aaPredicted RBP18.5■□□□□ 0.55
USE1-206ENST00000595101 CRACR2BQ8N4Y2 399 aaPredicted RBP18.5■□□□□ 0.55
USE1-206ENST00000595101 FAM227BQ96M60 508 aa18.5■□□□□ 0.55
USE1-206ENST00000595101 R3HDMLQ9H3Y0 253 aa18.5■□□□□ 0.55
USE1-206ENST00000595101 HERC5Q9UII4 1024 aaKnown RBP18.5■□□□□ 0.55
USE1-206ENST00000595101 FOCADQ5VW36 1801 aa18.49■□□□□ 0.55
USE1-206ENST00000595101 GSG1L2A8MUP6 293 aa18.49■□□□□ 0.55
USE1-206ENST00000595101 GDF11O95390 407 aa18.49■□□□□ 0.55
USE1-206ENST00000595101 CENPBP07199 599 aaPredicted RBP18.49■□□□□ 0.55
USE1-206ENST00000595101 GSPT1P15170 499 aaKnown RBP18.49■□□□□ 0.55
USE1-206ENST00000595101 CAP2P40123 477 aa18.49■□□□□ 0.55
USE1-206ENST00000595101 BRI3BPQ8WY22 251 aa18.49■□□□□ 0.55
USE1-206ENST00000595101 DYNLL2Q96FJ2 89 aa18.49■□□□□ 0.55
USE1-206ENST00000595101 ZHX2Q9Y6X8 837 aa18.49■□□□□ 0.55
USE1-206ENST00000595101 MANSC4A6NHS7 340 aaPredicted RBP18.48■□□□□ 0.55
USE1-206ENST00000595101 USP17L12C9JPN9 530 aa18.48■□□□□ 0.55
USE1-206ENST00000595101 USP17L21D6R901 530 aa18.48■□□□□ 0.55
USE1-206ENST00000595101 PPATQ06203 517 aa18.48■□□□□ 0.55
USE1-206ENST00000595101 SLC44A5Q8NCS7 719 aa18.48■□□□□ 0.55
USE1-206ENST00000595101 EPB41L4AQ9HCS5 686 aaPredicted RBP18.48■□□□□ 0.55
USE1-206ENST00000595101 ATP8A2Q9NTI2 1148 aa18.48■□□□□ 0.55
USE1-206ENST00000595101 SERPINB13Q9UIV8 391 aa18.48■□□□□ 0.55
USE1-206ENST00000595101 TBC1D8O95759 1140 aa18.47■□□□□ 0.55
USE1-206ENST00000595101 PPIL2Q13356 520 aa18.47■□□□□ 0.55
USE1-206ENST00000595101 CTR9Q6PD62 1173 aa18.47■□□□□ 0.55
USE1-206ENST00000595101 IFNL1Q8IU54 200 aa18.47■□□□□ 0.55
USE1-206ENST00000595101 PICK1Q9NRD5 415 aa18.47■□□□□ 0.55
USE1-206ENST00000595101 CCL15-CCL14A0A0B4J2E2 113 aa18.47■□□□□ 0.55
USE1-206ENST00000595101 A0A0D9SFI3 127 aa18.47■□□□□ 0.55
USE1-206ENST00000595101 FOXP2O15409 715 aa18.47■□□□□ 0.55
USE1-206ENST00000595101 CTCFP49711 727 aaPredicted RBP18.47■□□□□ 0.55
USE1-206ENST00000595101 GABPAQ06546 454 aa18.47■□□□□ 0.55
USE1-206ENST00000595101 SREBF2Q12772 1141 aa18.47■□□□□ 0.55
USE1-206ENST00000595101 CCL15Q16663 113 aa18.47■□□□□ 0.55
USE1-206ENST00000595101 TTC6Q86TZ1 520 aa18.47■□□□□ 0.55
USE1-206ENST00000595101 MYH7P12883 1935 aa18.46■□□□□ 0.55
USE1-206ENST00000595101 TESPA1A2RU30 521 aaPredicted RBP18.46■□□□□ 0.55
USE1-206ENST00000595101 SHMT1P34896 483 aa18.46■□□□□ 0.55
USE1-206ENST00000595101 GTF2A2P52657 109 aa18.46■□□□□ 0.55
USE1-206ENST00000595101 COL13A1Q5TAT6 717 aaPredicted RBP18.46■□□□□ 0.55
USE1-206ENST00000595101 FAM43AQ8N2R8 423 aa18.46■□□□□ 0.55
USE1-206ENST00000595101 TRIM34Q9BYJ4 488 aa18.46■□□□□ 0.55
USE1-206ENST00000595101 EHD4Q9H223 541 aa18.46■□□□□ 0.55
USE1-206ENST00000595101 AFG3L2Q9Y4W6 797 aa18.46■□□□□ 0.55
USE1-206ENST00000595101 DDX60LQ5H9U9 1706 aaKnown RBP18.45■□□□□ 0.54
USE1-206ENST00000595101 NMIQ13287 307 aaPredicted RBP18.45■□□□□ 0.54
USE1-206ENST00000595101 DGKZQ13574 1117 aa18.45■□□□□ 0.54
USE1-206ENST00000595101 MOGSQ13724 837 aa18.45■□□□□ 0.54
USE1-206ENST00000595101 LRRFIP1Q32MZ4 808 aaKnown RBP18.45■□□□□ 0.54
USE1-206ENST00000595101 TTC22Q5TAA0 569 aa18.45■□□□□ 0.54
USE1-206ENST00000595101 C12orf60Q5U649 245 aa18.45■□□□□ 0.54
USE1-206ENST00000595101 VPS53Q5VIR6 699 aa18.45■□□□□ 0.54
USE1-206ENST00000595101 TATDN1Q6P1N9 297 aa18.45■□□□□ 0.54
USE1-206ENST00000595101 KCNH4Q9UQ05 1017 aa18.45■□□□□ 0.54
USE1-206ENST00000595101 TRIM75PA6NK02 468 aa18.45■□□□□ 0.54
USE1-206ENST00000595101 SDSP20132 328 aa18.45■□□□□ 0.54
USE1-206ENST00000595101 INHBEP58166 350 aa18.45■□□□□ 0.54
USE1-206ENST00000595101 SNAPC2Q13487 334 aa18.45■□□□□ 0.54
USE1-206ENST00000595101 ZNF589Q86UQ0 364 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms