RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 ZNF384Q8TF68 577 aa12.23□□□□□ -0.45
RETREG3-211ENST00000591547 TRIB2Q92519 343 aa12.23□□□□□ -0.45
RETREG3-211ENST00000591547 CDCA7LQ96GN5 454 aa12.23□□□□□ -0.45
RETREG3-211ENST00000591547 UBE2OQ9C0C9 1292 aaKnown RBP12.23□□□□□ -0.45
RETREG3-211ENST00000591547 HMX1Q9NP08 348 aaPredicted RBP12.23□□□□□ -0.45
RETREG3-211ENST00000591547 ABCF2Q9UG63 623 aa12.23□□□□□ -0.45
RETREG3-211ENST00000591547 STXBP5LQ9Y2K9 1186 aa12.23□□□□□ -0.45
RETREG3-211ENST00000591547 EYSQ5T1H1 3165 aa12.22□□□□□ -0.45
RETREG3-211ENST00000591547 LAMA2P24043 3122 aaKnown RBP12.22□□□□□ -0.45
RETREG3-211ENST00000591547 RPTORQ8N122 1335 aa12.22□□□□□ -0.45
RETREG3-211ENST00000591547 MDM2Q00987 491 aaPredicted RBP12.22□□□□□ -0.45
RETREG3-211ENST00000591547 LRIT3Q3SXY7 679 aa12.22□□□□□ -0.45
RETREG3-211ENST00000591547 ANKLE1Q8NAG6 615 aa12.22□□□□□ -0.45
RETREG3-211ENST00000591547 YTHDC1Q96MU7 727 aaKnown RBP12.22□□□□□ -0.45
RETREG3-211ENST00000591547 FAM161BQ96MY7 647 aa12.22□□□□□ -0.45
RETREG3-211ENST00000591547 DENND2AQ9ULE3 1009 aa12.22□□□□□ -0.45
RETREG3-211ENST00000591547 DNAH12Q6ZR08 3092 aa12.21□□□□□ -0.45
RETREG3-211ENST00000591547 RHBDL3P58872 404 aa12.21□□□□□ -0.45
RETREG3-211ENST00000591547 TIMM10P62072 90 aa12.21□□□□□ -0.45
RETREG3-211ENST00000591547 JAG1P78504 1218 aa12.21□□□□□ -0.45
RETREG3-211ENST00000591547 RASGRF1Q13972 1273 aa12.21□□□□□ -0.45
RETREG3-211ENST00000591547 SHROOM1Q2M3G4 852 aaPredicted RBP12.21□□□□□ -0.45
RETREG3-211ENST00000591547 CCDC102BQ68D86 513 aa12.21□□□□□ -0.45
RETREG3-211ENST00000591547 DZIP1Q86YF9 867 aaKnown RBP12.21□□□□□ -0.45
RETREG3-211ENST00000591547 SSH1Q8WYL5 1049 aa12.21□□□□□ -0.45
RETREG3-211ENST00000591547 ASCC2Q9H1I8 757 aaPredicted RBP12.21□□□□□ -0.45
RETREG3-211ENST00000591547 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.21□□□□□ -0.45
RETREG3-211ENST00000591547 GNL3LQ9NVN8 582 aaKnown RBP12.21□□□□□ -0.45
RETREG3-211ENST00000591547 CEP126Q9P2H0 1117 aa12.21□□□□□ -0.45
RETREG3-211ENST00000591547 OGDHLQ9ULD0 1010 aa12.21□□□□□ -0.45
RETREG3-211ENST00000591547 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.21□□□□□ -0.45
RETREG3-211ENST00000591547 SPTBN5Q9NRC6 3674 aaKnown RBP12.21□□□□□ -0.46
RETREG3-211ENST00000591547 MROH7-TTC4A0A0A0MT08 1334 aa12.2□□□□□ -0.46
RETREG3-211ENST00000591547 PRKAR2AP13861 404 aaKnown RBP12.2□□□□□ -0.46
RETREG3-211ENST00000591547 CCND3P30281 292 aaPredicted RBP12.2□□□□□ -0.46
RETREG3-211ENST00000591547 MECOMQ03112 1051 aa12.2□□□□□ -0.46
RETREG3-211ENST00000591547 CCL14Q16627 93 aa12.2□□□□□ -0.46
RETREG3-211ENST00000591547 LRRC26Q2I0M4 334 aa12.2□□□□□ -0.46
RETREG3-211ENST00000591547 GPR153Q6NV75 609 aa12.2□□□□□ -0.46
RETREG3-211ENST00000591547 PROCA1Q8NCQ7 364 aaPredicted RBP12.2□□□□□ -0.46
RETREG3-211ENST00000591547 ZNF280CQ8ND82 737 aa12.2□□□□□ -0.46
RETREG3-211ENST00000591547 GUCD1Q96NT3 240 aa12.2□□□□□ -0.46
RETREG3-211ENST00000591547 TXNRD2Q9NNW7 524 aa12.2□□□□□ -0.46
RETREG3-211ENST00000591547 PNMA3Q9UL41 463 aa12.2□□□□□ -0.46
RETREG3-211ENST00000591547 SIPA1L1O43166 1804 aa12.2□□□□□ -0.46
RETREG3-211ENST00000591547 VCANP13611 3396 aa12.19□□□□□ -0.46
RETREG3-211ENST00000591547 FRMPD3Q5JV73 1810 aa12.19□□□□□ -0.46
RETREG3-211ENST00000591547 CACNB2Q08289 660 aaPredicted RBP12.19□□□□□ -0.46
RETREG3-211ENST00000591547 PI16Q6UXB8 463 aa12.19□□□□□ -0.46
RETREG3-211ENST00000591547 TBC1D9Q6ZT07 1266 aa12.19□□□□□ -0.46
RETREG3-211ENST00000591547 TRMT2AQ8IZ69 625 aaKnown RBP12.19□□□□□ -0.46
RETREG3-211ENST00000591547 P2RX7Q99572 595 aaKnown RBP12.19□□□□□ -0.46
RETREG3-211ENST00000591547 GPR75-ASB3A0A0A6YYF3 556 aa12.18□□□□□ -0.46
RETREG3-211ENST00000591547 SEMA3EO15041 775 aa12.18□□□□□ -0.46
RETREG3-211ENST00000591547 CIAO1O76071 339 aa12.18□□□□□ -0.46
RETREG3-211ENST00000591547 COL6A1P12109 1028 aa12.18□□□□□ -0.46
RETREG3-211ENST00000591547 CAPN2P17655 700 aa12.18□□□□□ -0.46
RETREG3-211ENST00000591547 CAP2P40123 477 aa12.18□□□□□ -0.46
RETREG3-211ENST00000591547 GCLCP48506 637 aaPredicted RBP12.18□□□□□ -0.46
RETREG3-211ENST00000591547 Q3C1V9 767 aa12.18□□□□□ -0.46
RETREG3-211ENST00000591547 MAP3K21Q5TCX8 1036 aa12.18□□□□□ -0.46
RETREG3-211ENST00000591547 LHX8Q68G74 356 aa12.18□□□□□ -0.46
RETREG3-211ENST00000591547 POTEEQ6S8J3 1075 aa12.18□□□□□ -0.46
RETREG3-211ENST00000591547 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.18□□□□□ -0.46
RETREG3-211ENST00000591547 FAM163AQ96GL9 167 aaPredicted RBP12.18□□□□□ -0.46
RETREG3-211ENST00000591547 PTPRCP08575 1304 aa12.17□□□□□ -0.46
RETREG3-211ENST00000591547 TBC1D12O60347 775 aa12.17□□□□□ -0.46
RETREG3-211ENST00000591547 MTMR2Q13614 643 aa12.17□□□□□ -0.46
RETREG3-211ENST00000591547 XAGE2Q96GT9 111 aa12.17□□□□□ -0.46
RETREG3-211ENST00000591547 OSBPL5Q9H0X9 879 aaPredicted RBP12.17□□□□□ -0.46
RETREG3-211ENST00000591547 PORCNQ9H237 461 aa12.17□□□□□ -0.46
RETREG3-211ENST00000591547 MORF4L1Q9UBU8 362 aa12.17□□□□□ -0.46
RETREG3-211ENST00000591547 NDUFB9Q9Y6M9 179 aa12.17□□□□□ -0.46
RETREG3-211ENST00000591547 USP17L5A8MUK1 530 aa12.16□□□□□ -0.46
RETREG3-211ENST00000591547 UBTFL1P0CB47 393 aaPredicted RBP12.16□□□□□ -0.46
RETREG3-211ENST00000591547 IL15P40933 162 aaPredicted RBP12.16□□□□□ -0.46
RETREG3-211ENST00000591547 TFCP2Q12800 502 aa12.16□□□□□ -0.46
RETREG3-211ENST00000591547 SH3D19Q5HYK7 790 aa12.16□□□□□ -0.46
RETREG3-211ENST00000591547 ERICH6Q7L0X2 663 aa12.16□□□□□ -0.46
RETREG3-211ENST00000591547 ZGPATQ8N5A5 531 aaKnown RBP12.16□□□□□ -0.46
RETREG3-211ENST00000591547 RBPJLQ9UBG7 517 aa12.16□□□□□ -0.46
RETREG3-211ENST00000591547 CDK5RAP2Q96SN8 1893 aa12.16□□□□□ -0.46
RETREG3-211ENST00000591547 A0A1B0GUL7 405 aa12.15□□□□□ -0.46
RETREG3-211ENST00000591547 POTEB2H3BUK9 544 aa12.15□□□□□ -0.46
RETREG3-211ENST00000591547 GDF11O95390 407 aa12.15□□□□□ -0.46
RETREG3-211ENST00000591547 ZKSCAN1P17029 563 aaPredicted RBP12.15□□□□□ -0.46
RETREG3-211ENST00000591547 ATN1P54259 1190 aaPredicted RBP12.15□□□□□ -0.46
RETREG3-211ENST00000591547 HERVK_113P62684 666 aa12.15□□□□□ -0.46
RETREG3-211ENST00000591547 IRX3P78415 501 aaPredicted RBP12.15□□□□□ -0.46
RETREG3-211ENST00000591547 PABPC4Q13310 644 aaKnown RBP eCLIP12.15□□□□□ -0.46
RETREG3-211ENST00000591547 SLF2Q8IX21 1173 aa12.15□□□□□ -0.46
RETREG3-211ENST00000591547 SH3RF3Q8TEJ3 882 aaPredicted RBP12.15□□□□□ -0.46
RETREG3-211ENST00000591547 USP6NLQ92738 828 aa12.15□□□□□ -0.46
RETREG3-211ENST00000591547 NSUN4Q96CB9 384 aaKnown RBP12.15□□□□□ -0.46
RETREG3-211ENST00000591547 NUDT12Q9BQG2 462 aa12.15□□□□□ -0.46
RETREG3-211ENST00000591547 PAGR1Q9BTK6 254 aa12.15□□□□□ -0.46
RETREG3-211ENST00000591547 HMG20BQ9P0W2 317 aa12.15□□□□□ -0.46
RETREG3-211ENST00000591547 MAST2Q6P0Q8 1798 aa12.15□□□□□ -0.46
RETREG3-211ENST00000591547 CT47B1P0C2W7 299 aaPredicted RBP12.14□□□□□ -0.47
RETREG3-211ENST00000591547 SPTY2D1Q68D10 685 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms