RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 CYP2D7A0A087X1C5 515 aa25.3■■□□□ 1.64
CIRBP-229ENST00000590704 PATL2C9JE40 543 aaKnown RBP25.3■■□□□ 1.64
CIRBP-229ENST00000590704 CHMLP26374 656 aa25.3■■□□□ 1.64
CIRBP-229ENST00000590704 GJA5P36382 358 aa25.3■■□□□ 1.64
CIRBP-229ENST00000590704 MAP3K9P80192 1104 aa25.3■■□□□ 1.64
CIRBP-229ENST00000590704 CTR9Q6PD62 1173 aa25.3■■□□□ 1.64
CIRBP-229ENST00000590704 ZKSCAN4Q969J2 545 aaPredicted RBP25.3■■□□□ 1.64
CIRBP-229ENST00000590704 ZNF341Q9BYN7 854 aa25.3■■□□□ 1.64
CIRBP-229ENST00000590704 UNCXA6NJT0 531 aa25.29■■□□□ 1.64
CIRBP-229ENST00000590704 USP17L12C9JPN9 530 aa25.29■■□□□ 1.64
CIRBP-229ENST00000590704 USP17L21D6R901 530 aa25.29■■□□□ 1.64
CIRBP-229ENST00000590704 VGLL4Q14135 290 aa25.29■■□□□ 1.64
CIRBP-229ENST00000590704 TTLL12Q14166 644 aaPredicted RBP25.29■■□□□ 1.64
CIRBP-229ENST00000590704 BMP2KLQ5H9B9 411 aa25.29■■□□□ 1.64
CIRBP-229ENST00000590704 RASAL3Q86YV0 1011 aa25.29■■□□□ 1.64
CIRBP-229ENST00000590704 FOXP4Q8IVH2 680 aaPredicted RBP25.29■■□□□ 1.64
CIRBP-229ENST00000590704 MCM9Q9NXL9 1143 aa25.29■■□□□ 1.64
CIRBP-229ENST00000590704 SNCAIPQ9Y6H5 919 aa25.29■■□□□ 1.64
CIRBP-229ENST00000590704 C12orf60Q5U649 245 aa25.28■■□□□ 1.64
CIRBP-229ENST00000590704 DCAF15Q66K64 600 aa25.28■■□□□ 1.64
CIRBP-229ENST00000590704 ANKRD13AQ8IZ07 590 aa25.28■■□□□ 1.64
CIRBP-229ENST00000590704 IFNL3Q8IZI9 196 aa25.28■■□□□ 1.64
CIRBP-229ENST00000590704 CNKSR2Q8WXI2 1034 aa25.28■■□□□ 1.64
CIRBP-229ENST00000590704 SLC10A3P09131 477 aa25.28■■□□□ 1.64
CIRBP-229ENST00000590704 IREB2P48200 963 aaKnown RBP25.28■■□□□ 1.64
CIRBP-229ENST00000590704 SHROOM1Q2M3G4 852 aaPredicted RBP25.28■■□□□ 1.64
CIRBP-229ENST00000590704 GIMAP6Q6P9H5 292 aa25.28■■□□□ 1.64
CIRBP-229ENST00000590704 CWC27Q6UX04 472 aaKnown RBP25.28■■□□□ 1.64
CIRBP-229ENST00000590704 HOOK2Q96ED9 719 aa25.28■■□□□ 1.64
CIRBP-229ENST00000590704 CAPNS2Q96L46 248 aa25.28■■□□□ 1.64
CIRBP-229ENST00000590704 WRNIP1Q96S55 665 aa25.28■■□□□ 1.64
CIRBP-229ENST00000590704 EHD4Q9H223 541 aa25.28■■□□□ 1.64
CIRBP-229ENST00000590704 WDR33Q9C0J8 1336 aaKnown RBP25.27■■□□□ 1.64
CIRBP-229ENST00000590704 ZNF157P51786 506 aaPredicted RBP25.27■■□□□ 1.64
CIRBP-229ENST00000590704 SBK1Q52WX2 424 aa25.27■■□□□ 1.64
CIRBP-229ENST00000590704 HERC5Q9UII4 1024 aaKnown RBP25.27■■□□□ 1.64
CIRBP-229ENST00000590704 GNAT2P19087 354 aa25.26■■□□□ 1.63
CIRBP-229ENST00000590704 NOL9Q5SY16 702 aaKnown RBP25.26■■□□□ 1.63
CIRBP-229ENST00000590704 TATDN1Q6P1N9 297 aa25.26■■□□□ 1.63
CIRBP-229ENST00000590704 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.26■■□□□ 1.631e-6■■□□□ 11.4
CIRBP-229ENST00000590704 TACC3Q9Y6A5 838 aa25.26■■□□□ 1.63
CIRBP-229ENST00000590704 AOC2O75106 756 aa25.25■■□□□ 1.63
CIRBP-229ENST00000590704 SHMT1P34896 483 aa25.25■■□□□ 1.63
CIRBP-229ENST00000590704 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.25■■□□□ 1.63
CIRBP-229ENST00000590704 HSPD1P10809 573 aaKnown RBP25.24■■□□□ 1.63
CIRBP-229ENST00000590704 TTC6Q86TZ1 520 aa25.24■■□□□ 1.63
CIRBP-229ENST00000590704 SLC44A5Q8NCS7 719 aa25.24■■□□□ 1.63
CIRBP-229ENST00000590704 DYNLL2Q96FJ2 89 aa25.24■■□□□ 1.63
CIRBP-229ENST00000590704 SERPINB13Q9UIV8 391 aa25.24■■□□□ 1.63
CIRBP-229ENST00000590704 CCDC171Q6TFL3 1326 aa25.24■■□□□ 1.63
CIRBP-229ENST00000590704 ALX1Q15699 326 aa25.23■■□□□ 1.63
CIRBP-229ENST00000590704 SPRYD7Q5W111 196 aa25.23■■□□□ 1.63
CIRBP-229ENST00000590704 SLC10A4Q96EP9 437 aa25.23■■□□□ 1.63
CIRBP-229ENST00000590704 ELP3Q9H9T3 547 aa25.23■■□□□ 1.63
CIRBP-229ENST00000590704 HIP1O00291 1037 aa25.22■■□□□ 1.63
CIRBP-229ENST00000590704 POLR3DP05423 398 aaPredicted RBP25.22■■□□□ 1.63
CIRBP-229ENST00000590704 CAP2P40123 477 aa25.22■■□□□ 1.63
CIRBP-229ENST00000590704 JMYQ8N9B5 988 aa25.22■■□□□ 1.63
CIRBP-229ENST00000590704 THSD7BQ9C0I4 1608 aa25.22■■□□□ 1.63
CIRBP-229ENST00000590704 CTNND1O60716 968 aaKnown RBP25.21■■□□□ 1.63
CIRBP-229ENST00000590704 FGAP02671 866 aa25.21■■□□□ 1.63
CIRBP-229ENST00000590704 HLA-DOAP06340 250 aa25.21■■□□□ 1.63
CIRBP-229ENST00000590704 CCDC102AQ96A19 550 aa25.21■■□□□ 1.63
CIRBP-229ENST00000590704 WNK4Q96J92 1243 aa25.21■■□□□ 1.63
CIRBP-229ENST00000590704 DIAPH3Q9NSV4 1193 aa25.21■■□□□ 1.63
CIRBP-229ENST00000590704 PHIPQ8WWQ0 1821 aa25.21■■□□□ 1.63
CIRBP-229ENST00000590704 SPDYE5A6NIY4 337 aa25.21■■□□□ 1.63
CIRBP-229ENST00000590704 SGSM2O43147 1006 aa25.21■■□□□ 1.63
CIRBP-229ENST00000590704 CCDC84Q86UT8 332 aaPredicted RBP25.21■■□□□ 1.63
CIRBP-229ENST00000590704 SCYL3Q8IZE3 742 aa25.21■■□□□ 1.63
CIRBP-229ENST00000590704 C16orf86Q6ZW13 317 aa25.2■■□□□ 1.62
CIRBP-229ENST00000590704 OPTNQ96CV9 577 aa25.2■■□□□ 1.62
CIRBP-229ENST00000590704 MS4A4AQ96JQ5 239 aa25.2■■□□□ 1.62
CIRBP-229ENST00000590704 ARPP21Q9UBL0 812 aaPredicted RBP25.2■■□□□ 1.62
CIRBP-229ENST00000590704 LAMB1P07942 1786 aa25.19■■□□□ 1.62
CIRBP-229ENST00000590704 PTPRAP18433 802 aa25.19■■□□□ 1.62
CIRBP-229ENST00000590704 GUCY1A2P33402 732 aa25.19■■□□□ 1.62
CIRBP-229ENST00000590704 ECE1P42892 770 aa25.19■■□□□ 1.62
CIRBP-229ENST00000590704 CDK8P49336 464 aa25.19■■□□□ 1.62
CIRBP-229ENST00000590704 ROBO3Q96MS0 1386 aa25.18■■□□□ 1.62
CIRBP-229ENST00000590704 APPP05067 770 aa25.18■■□□□ 1.62
CIRBP-229ENST00000590704 KIF23Q02241 960 aaPredicted RBP25.18■■□□□ 1.62
CIRBP-229ENST00000590704 NBPF3Q9H094 633 aa25.18■■□□□ 1.62
CIRBP-229ENST00000590704 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.18■■□□□ 1.62
CIRBP-229ENST00000590704 CSADQ9Y600 493 aa25.18■■□□□ 1.62
CIRBP-229ENST00000590704 IRF6O14896 467 aa25.17■■□□□ 1.62
CIRBP-229ENST00000590704 MAP2K2P36507 400 aa25.17■■□□□ 1.62
CIRBP-229ENST00000590704 PTH1RQ03431 593 aa25.17■■□□□ 1.62
CIRBP-229ENST00000590704 MKRN3Q13064 507 aaKnown RBP25.17■■□□□ 1.62
CIRBP-229ENST00000590704 NOGQ13253 232 aa25.17■■□□□ 1.62
CIRBP-229ENST00000590704 GRM1Q13255 1194 aa25.17■■□□□ 1.62
CIRBP-229ENST00000590704 IFFO2Q5TF58 517 aa25.17■■□□□ 1.62
CIRBP-229ENST00000590704 PAXIP1Q6ZW49 1069 aaPredicted RBP25.17■■□□□ 1.62
CIRBP-229ENST00000590704 ERO1BQ86YB8 467 aa25.17■■□□□ 1.62
CIRBP-229ENST00000590704 NKX2-3Q8TAU0 364 aa25.17■■□□□ 1.62
CIRBP-229ENST00000590704 INCENPQ9NQS7 918 aa25.17■■□□□ 1.62
CIRBP-229ENST00000590704 DOCK1Q14185 1865 aa25.17■■□□□ 1.62
CIRBP-229ENST00000590704 MINDY4BA8MYZ0 360 aa25.16■■□□□ 1.62
CIRBP-229ENST00000590704 GDF11O95390 407 aa25.16■■□□□ 1.62
CIRBP-229ENST00000590704 MOGSQ13724 837 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms