RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 G2E3Q7L622 706 aa8.23□□□□□ -1.09
DNMT1-222ENST00000590619 SH3BP5LQ7L8J4 393 aa8.23□□□□□ -1.09
DNMT1-222ENST00000590619 PROCA1Q8NCQ7 364 aaPredicted RBP8.23□□□□□ -1.09
DNMT1-222ENST00000590619 PUS3Q9BZE2 481 aaKnown RBP8.23□□□□□ -1.09
DNMT1-222ENST00000590619 TXNRD2Q9NNW7 524 aa8.23□□□□□ -1.09
DNMT1-222ENST00000590619 SPINK5Q9NQ38 1064 aaPredicted RBP8.23□□□□□ -1.09
DNMT1-222ENST00000590619 PDLIM7Q9NR12 457 aa8.23□□□□□ -1.09
DNMT1-222ENST00000590619 CNNM1Q9NRU3 951 aa8.23□□□□□ -1.09
DNMT1-222ENST00000590619 USP40Q9NVE5 1235 aa8.23□□□□□ -1.09
DNMT1-222ENST00000590619 DDX20Q9UHI6 824 aaKnown RBP8.23□□□□□ -1.09
DNMT1-222ENST00000590619 SUGT1Q9Y2Z0 365 aa8.23□□□□□ -1.09
DNMT1-222ENST00000590619 LRRFIP2Q9Y608 721 aaKnown RBP8.23□□□□□ -1.09
DNMT1-222ENST00000590619 ATRNL1Q5VV63 1379 aa8.22□□□□□ -1.09
DNMT1-222ENST00000590619 FAM86C2PA6NEL3 165 aa8.22□□□□□ -1.09
DNMT1-222ENST00000590619 GRXCR1A8MXD5 290 aa8.22□□□□□ -1.09
DNMT1-222ENST00000590619 SMIM22K7EJ46 135 aa8.22□□□□□ -1.09
DNMT1-222ENST00000590619 FRAT2O75474 233 aaPredicted RBP8.22□□□□□ -1.09
DNMT1-222ENST00000590619 KCNQ1P51787 676 aa8.22□□□□□ -1.09
DNMT1-222ENST00000590619 SNX17Q15036 470 aa8.22□□□□□ -1.09
DNMT1-222ENST00000590619 CCDC57Q2TAC2 916 aa8.22□□□□□ -1.09
DNMT1-222ENST00000590619 EPHA10Q5JZY3 1008 aa8.22□□□□□ -1.09
DNMT1-222ENST00000590619 LMBR1LQ6UX01 489 aa8.22□□□□□ -1.09
DNMT1-222ENST00000590619 VPS37DQ86XT2 251 aa8.22□□□□□ -1.09
DNMT1-222ENST00000590619 CCDC146Q8IYE0 955 aa8.22□□□□□ -1.09
DNMT1-222ENST00000590619 GPRC5AQ8NFJ5 357 aa8.22□□□□□ -1.09
DNMT1-222ENST00000590619 SOCS4Q8WXH5 440 aa8.22□□□□□ -1.09
DNMT1-222ENST00000590619 FLRT1Q9NZU1 646 aa8.22□□□□□ -1.09
DNMT1-222ENST00000590619 RBPJLQ9UBG7 517 aa8.22□□□□□ -1.09
DNMT1-222ENST00000590619 CHMP3Q9Y3E7 222 aa8.22□□□□□ -1.09
DNMT1-222ENST00000590619 CLSPNQ9HAW4 1339 aa8.22□□□□□ -1.09
DNMT1-222ENST00000590619 CNGA1P29973 690 aa8.21□□□□□ -1.1
DNMT1-222ENST00000590619 RGS2P41220 211 aa8.21□□□□□ -1.1
DNMT1-222ENST00000590619 TLE2Q04725 743 aa8.21□□□□□ -1.1
DNMT1-222ENST00000590619 GPR142Q7Z601 462 aa8.21□□□□□ -1.1
DNMT1-222ENST00000590619 TSPYL6Q8N831 410 aa8.21□□□□□ -1.1
DNMT1-222ENST00000590619 ARRDC4Q8NCT1 418 aa8.21□□□□□ -1.1
DNMT1-222ENST00000590619 TRPV1Q8NER1 839 aa8.21□□□□□ -1.1
DNMT1-222ENST00000590619 EDC3Q96F86 508 aaKnown RBP8.21□□□□□ -1.1
DNMT1-222ENST00000590619 PBX4Q9BYU1 374 aa8.21□□□□□ -1.1
DNMT1-222ENST00000590619 PORCNQ9H237 461 aa8.21□□□□□ -1.1
DNMT1-222ENST00000590619 TACC3Q9Y6A5 838 aa8.21□□□□□ -1.1
DNMT1-222ENST00000590619 PLXNB2O15031 1838 aa8.2□□□□□ -1.1
DNMT1-222ENST00000590619 DDTLA6NHG4 134 aaPredicted RBP8.2□□□□□ -1.1
DNMT1-222ENST00000590619 PI4K2BG5E9Z4 385 aa8.2□□□□□ -1.1
DNMT1-222ENST00000590619 TLL1O43897 1013 aa8.2□□□□□ -1.1
DNMT1-222ENST00000590619 MSCO60682 206 aa8.2□□□□□ -1.1
DNMT1-222ENST00000590619 MAPK4P31152 587 aa8.2□□□□□ -1.1
DNMT1-222ENST00000590619 HMGCS2P54868 508 aa8.2□□□□□ -1.1
DNMT1-222ENST00000590619 PABPC4Q13310 644 aaKnown RBP eCLIP8.2□□□□□ -1.1
DNMT1-222ENST00000590619 DIXDC1Q155Q3 683 aa8.2□□□□□ -1.1
DNMT1-222ENST00000590619 CAVIN4Q5BKX8 364 aa8.2□□□□□ -1.1
DNMT1-222ENST00000590619 TAF7LQ5H9L4 462 aa8.2□□□□□ -1.1
DNMT1-222ENST00000590619 SH3D19Q5HYK7 790 aa8.2□□□□□ -1.1
DNMT1-222ENST00000590619 C1orf53Q5VUE5 145 aa8.2□□□□□ -1.1
DNMT1-222ENST00000590619 MFSD14CQ5VZR4 134 aa8.2□□□□□ -1.1
DNMT1-222ENST00000590619 C16orf59Q7L2K0 433 aa8.2□□□□□ -1.1
DNMT1-222ENST00000590619 PLEKHH3Q7Z736 793 aa8.2□□□□□ -1.1
DNMT1-222ENST00000590619 ZNF280CQ8ND82 737 aa8.2□□□□□ -1.1
DNMT1-222ENST00000590619 PCGF6Q9BYE7 350 aa8.2□□□□□ -1.1
DNMT1-222ENST00000590619 TSPYL2Q9H2G4 693 aaPredicted RBP8.2□□□□□ -1.1
DNMT1-222ENST00000590619 MAST3O60307 1309 aa8.2□□□□□ -1.1
DNMT1-222ENST00000590619 XIRP2A4UGR9 3374 aa8.19□□□□□ -1.1
DNMT1-222ENST00000590619 KIAA0355O15063 1070 aa8.19□□□□□ -1.1
DNMT1-222ENST00000590619 ENTPD3O75355 529 aa8.19□□□□□ -1.1
DNMT1-222ENST00000590619 IGHA2P01877 340 aa8.19□□□□□ -1.1
DNMT1-222ENST00000590619 SLC4A2P04920 1241 aa8.19□□□□□ -1.1
DNMT1-222ENST00000590619 HOXA7P31268 230 aaPredicted RBP8.19□□□□□ -1.1
DNMT1-222ENST00000590619 ADCYAP1R1P41586 468 aa8.19□□□□□ -1.1
DNMT1-222ENST00000590619 RGS3P49796 1198 aa8.19□□□□□ -1.1
DNMT1-222ENST00000590619 NHLH1Q02575 133 aa8.19□□□□□ -1.1
DNMT1-222ENST00000590619 MAP2K5Q13163 448 aa8.19□□□□□ -1.1
DNMT1-222ENST00000590619 AAK1Q2M2I8 961 aa8.19□□□□□ -1.1
DNMT1-222ENST00000590619 LINS1Q8NG48 757 aa8.19□□□□□ -1.1
DNMT1-222ENST00000590619 FERMT2Q96AC1 680 aa8.19□□□□□ -1.1
DNMT1-222ENST00000590619 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.19□□□□□ -1.1
DNMT1-222ENST00000590619 IDI2Q9BXS1 227 aa8.19□□□□□ -1.1
DNMT1-222ENST00000590619 MYH16Q9H6N6 1097 aa8.19□□□□□ -1.1
DNMT1-222ENST00000590619 LTBP2Q14767 1821 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 ERC2O15083 957 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 TBC1D12O60347 775 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 RAG1P15918 1043 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 CYP2C19P33261 490 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 HERVK_113P62684 666 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 ATP2B2Q01814 1243 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 FPGSQ05932 587 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 RRP1BQ14684 758 aaKnown RBP8.18□□□□□ -1.1
DNMT1-222ENST00000590619 RASIP1Q5U651 963 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 ANO1Q5XXA6 986 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 CCDC129Q6ZRS4 1044 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 POTEDQ86YR6 584 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 ZSCAN29Q8IWY8 852 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-222ENST00000590619 NPLOC4Q8TAT6 608 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 RUNDC1Q96C34 613 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 APBA2Q99767 749 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 CHMP4AQ9BY43 222 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 CD320Q9NPF0 282 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 IFT57Q9NWB7 429 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 NDUFB9Q9Y6M9 179 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 MYH3P11055 1940 aa8.18□□□□□ -1.1
DNMT1-222ENST00000590619 UTYO14607 1347 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms