RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 CRACR2BQ8N4Y2 399 aaPredicted RBP25.58■■□□□ 1.69
ATG4D-212ENST00000590096 STRBPQ96SI9 672 aaKnown RBP25.58■■□□□ 1.69
ATG4D-212ENST00000590096 ELP3Q9H9T3 547 aa25.58■■□□□ 1.69
ATG4D-212ENST00000590096 ZNF112Q9UJU3 913 aa25.58■■□□□ 1.69
ATG4D-212ENST00000590096 GNAT2P19087 354 aa25.57■■□□□ 1.68
ATG4D-212ENST00000590096 MAP2K2P36507 400 aa25.57■■□□□ 1.68
ATG4D-212ENST00000590096 FOXP4Q8IVH2 680 aaPredicted RBP25.57■■□□□ 1.68
ATG4D-212ENST00000590096 AMOTL1Q8IY63 956 aa25.57■■□□□ 1.68
ATG4D-212ENST00000590096 ZKSCAN4Q969J2 545 aaPredicted RBP25.57■■□□□ 1.68
ATG4D-212ENST00000590096 SEC62Q99442 399 aaKnown RBP25.57■■□□□ 1.68
ATG4D-212ENST00000590096 DDX60LQ5H9U9 1706 aaKnown RBP25.57■■□□□ 1.68
ATG4D-212ENST00000590096 THSD7BQ9C0I4 1608 aa25.56■■□□□ 1.68
ATG4D-212ENST00000590096 INPP5BP32019 993 aa25.56■■□□□ 1.68
ATG4D-212ENST00000590096 HELLSQ9NRZ9 838 aa25.56■■□□□ 1.68
ATG4D-212ENST00000590096 SIPA1L1O43166 1804 aa25.56■■□□□ 1.68
ATG4D-212ENST00000590096 FAM196BA6NMK8 535 aa25.55■■□□□ 1.68
ATG4D-212ENST00000590096 HIP1O00291 1037 aa25.55■■□□□ 1.68
ATG4D-212ENST00000590096 SLURP2P0DP57 97 aa25.55■■□□□ 1.68
ATG4D-212ENST00000590096 GSPT1P15170 499 aaKnown RBP25.55■■□□□ 1.68
ATG4D-212ENST00000590096 WNK4Q96J92 1243 aa25.55■■□□□ 1.68
ATG4D-212ENST00000590096 PHF20L1A8MW92 1017 aa25.54■■□□□ 1.68
ATG4D-212ENST00000590096 ZBTB48P10074 688 aaPredicted RBP25.54■■□□□ 1.68
ATG4D-212ENST00000590096 SDSP20132 328 aa25.54■■□□□ 1.68
ATG4D-212ENST00000590096 MKRN3Q13064 507 aaKnown RBP25.54■■□□□ 1.68
ATG4D-212ENST00000590096 SPRYD7Q5W111 196 aa25.54■■□□□ 1.68
ATG4D-212ENST00000590096 DIAPH3Q9NSV4 1193 aa25.54■■□□□ 1.68
ATG4D-212ENST00000590096 SNCAIPQ9Y6H5 919 aa25.54■■□□□ 1.68
ATG4D-212ENST00000590096 BAZ2AQ9UIF9 1905 aaKnown RBP25.54■■□□□ 1.68
ATG4D-212ENST00000590096 CTNND1O60716 968 aaKnown RBP25.53■■□□□ 1.68
ATG4D-212ENST00000590096 APPP05067 770 aa25.53■■□□□ 1.68
ATG4D-212ENST00000590096 HSPA1AP0DMV8 641 aaKnown RBP25.53■■□□□ 1.68
ATG4D-212ENST00000590096 HSPA1BP0DMV9 641 aaKnown RBP25.53■■□□□ 1.68
ATG4D-212ENST00000590096 KIF23Q02241 960 aaPredicted RBP25.53■■□□□ 1.68
ATG4D-212ENST00000590096 NMIQ13287 307 aaPredicted RBP25.53■■□□□ 1.68
ATG4D-212ENST00000590096 NOL9Q5SY16 702 aaKnown RBP25.53■■□□□ 1.68
ATG4D-212ENST00000590096 OPTNQ96CV9 577 aa25.53■■□□□ 1.68
ATG4D-212ENST00000590096 FAM227BQ96M60 508 aa25.53■■□□□ 1.68
ATG4D-212ENST00000590096 EHD4Q9H223 541 aa25.53■■□□□ 1.68
ATG4D-212ENST00000590096 SERPINB13Q9UIV8 391 aa25.53■■□□□ 1.68
ATG4D-212ENST00000590096 A0A0D9SFI3 127 aa25.52■■□□□ 1.68
ATG4D-212ENST00000590096 MCMDC2Q4G0Z9 681 aa25.52■■□□□ 1.68
ATG4D-212ENST00000590096 GIMAP6Q6P9H5 292 aa25.52■■□□□ 1.68
ATG4D-212ENST00000590096 METTL16Q86W50 562 aaKnown RBP25.52■■□□□ 1.68
ATG4D-212ENST00000590096 ERO1BQ86YB8 467 aa25.52■■□□□ 1.68
ATG4D-212ENST00000590096 SCYL3Q8IZE3 742 aa25.52■■□□□ 1.68
ATG4D-212ENST00000590096 PICK1Q9NRD5 415 aa25.52■■□□□ 1.68
ATG4D-212ENST00000590096 SPDYE5A6NIY4 337 aa25.51■■□□□ 1.67
ATG4D-212ENST00000590096 GSG1L2A8MUP6 293 aa25.51■■□□□ 1.67
ATG4D-212ENST00000590096 PATL2C9JE40 543 aaKnown RBP25.51■■□□□ 1.67
ATG4D-212ENST00000590096 PLCD1P51178 756 aa25.51■■□□□ 1.67
ATG4D-212ENST00000590096 MAP2K1Q02750 393 aaPredicted RBP25.51■■□□□ 1.67
ATG4D-212ENST00000590096 CCDC129Q6ZRS4 1044 aa25.51■■□□□ 1.67
ATG4D-212ENST00000590096 OTUD5Q96G74 571 aa25.51■■□□□ 1.67
ATG4D-212ENST00000590096 ZIC5Q96T25 663 aa25.51■■□□□ 1.67
ATG4D-212ENST00000590096 NACAP1Q9BZK3 213 aa25.51■■□□□ 1.67
ATG4D-212ENST00000590096 ARPP21Q9UBL0 812 aaPredicted RBP25.51■■□□□ 1.67
ATG4D-212ENST00000590096 DOCK1Q14185 1865 aa25.51■■□□□ 1.67
ATG4D-212ENST00000590096 USP17L12C9JPN9 530 aa25.5■■□□□ 1.67
ATG4D-212ENST00000590096 USP17L21D6R901 530 aa25.5■■□□□ 1.67
ATG4D-212ENST00000590096 TDO2P48775 406 aa25.5■■□□□ 1.67
ATG4D-212ENST00000590096 REM2Q8IYK8 340 aaPredicted RBP25.5■■□□□ 1.67
ATG4D-212ENST00000590096 DNAJC18Q9H819 358 aa25.5■■□□□ 1.67
ATG4D-212ENST00000590096 CYP2D6P10635 497 aa25.49■■□□□ 1.67
ATG4D-212ENST00000590096 MFAP1P55081 439 aaKnown RBP25.49■■□□□ 1.67
ATG4D-212ENST00000590096 SKAP1Q86WV1 359 aa25.49■■□□□ 1.67
ATG4D-212ENST00000590096 CNKSR2Q8WXI2 1034 aa25.49■■□□□ 1.67
ATG4D-212ENST00000590096 GJA5P36382 358 aa25.48■■□□□ 1.67
ATG4D-212ENST00000590096 CAP2P40123 477 aa25.48■■□□□ 1.67
ATG4D-212ENST00000590096 PPATQ06203 517 aa25.48■■□□□ 1.67
ATG4D-212ENST00000590096 C12orf60Q5U649 245 aa25.48■■□□□ 1.67
ATG4D-212ENST00000590096 CTR9Q6PD62 1173 aa25.48■■□□□ 1.67
ATG4D-212ENST00000590096 CWC27Q6UX04 472 aaKnown RBP25.48■■□□□ 1.67
ATG4D-212ENST00000590096 BEGAINQ9BUH8 593 aa25.48■■□□□ 1.67
ATG4D-212ENST00000590096 EPB41L4AQ9HCS5 686 aaPredicted RBP25.48■■□□□ 1.67
ATG4D-212ENST00000590096 ATAD5Q96QE3 1844 aa25.47■■□□□ 1.67
ATG4D-212ENST00000590096 MANSC4A6NHS7 340 aaPredicted RBP25.47■■□□□ 1.67
ATG4D-212ENST00000590096 SREBF2Q12772 1141 aa25.47■■□□□ 1.67
ATG4D-212ENST00000590096 PPIL2Q13356 520 aa25.47■■□□□ 1.67
ATG4D-212ENST00000590096 IFNL3Q8IZI9 196 aa25.47■■□□□ 1.67
ATG4D-212ENST00000590096 TAOK2Q9UL54 1235 aa25.47■■□□□ 1.67
ATG4D-212ENST00000590096 CCDC171Q6TFL3 1326 aa25.46■■□□□ 1.67
ATG4D-212ENST00000590096 CYP2D7A0A087X1C5 515 aa25.46■■□□□ 1.67
ATG4D-212ENST00000590096 SBK1Q52WX2 424 aa25.46■■□□□ 1.67
ATG4D-212ENST00000590096 TNS4Q8IZW8 715 aa25.46■■□□□ 1.67
ATG4D-212ENST00000590096 NAPBQ9H115 298 aa25.46■■□□□ 1.67
ATG4D-212ENST00000590096 SWAP70Q9UH65 585 aa25.46■■□□□ 1.67
ATG4D-212ENST00000590096 MINDY4BA8MYZ0 360 aa25.45■■□□□ 1.66
ATG4D-212ENST00000590096 PTPRAP18433 802 aa25.45■■□□□ 1.66
ATG4D-212ENST00000590096 GTF2A2P52657 109 aa25.45■■□□□ 1.66
ATG4D-212ENST00000590096 GABPAQ06546 454 aa25.45■■□□□ 1.66
ATG4D-212ENST00000590096 RRP1BQ14684 758 aaKnown RBP25.45■■□□□ 1.66
ATG4D-212ENST00000590096 TATDN1Q6P1N9 297 aa25.45■■□□□ 1.66
ATG4D-212ENST00000590096 ZNF589Q86UQ0 364 aaPredicted RBP25.45■■□□□ 1.66
ATG4D-212ENST00000590096 LAMB1P07942 1786 aa25.44■■□□□ 1.66
ATG4D-212ENST00000590096 IRF6O14896 467 aa25.44■■□□□ 1.66
ATG4D-212ENST00000590096 GDF11O95390 407 aa25.44■■□□□ 1.66
ATG4D-212ENST00000590096 ASNSP08243 561 aa25.44■■□□□ 1.66
ATG4D-212ENST00000590096 INHBEP58166 350 aa25.44■■□□□ 1.66
ATG4D-212ENST00000590096 EVX2Q03828 476 aa25.44■■□□□ 1.66
ATG4D-212ENST00000590096 CERKLQ49MI3 558 aaPredicted RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms