RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 ARMC9Q7Z3E5 817 aa17.43■□□□□ 0.38
CNN1-208ENST00000588935 FOXP4Q8IVH2 680 aaPredicted RBP17.43■□□□□ 0.38
CNN1-208ENST00000588935 HOOK2Q96ED9 719 aa17.43■□□□□ 0.38
CNN1-208ENST00000588935 SSC5DA1L4H1 1573 aa17.43■□□□□ 0.38
CNN1-208ENST00000588935 RPAP1Q9BWH6 1393 aaPredicted RBP17.42■□□□□ 0.38
CNN1-208ENST00000588935 FGAP02671 866 aa17.42■□□□□ 0.38
CNN1-208ENST00000588935 C12orf60Q5U649 245 aa17.42■□□□□ 0.38
CNN1-208ENST00000588935 PAXIP1Q6ZW49 1069 aaPredicted RBP17.42■□□□□ 0.38
CNN1-208ENST00000588935 ZNF341Q9BYN7 854 aa17.42■□□□□ 0.38
CNN1-208ENST00000588935 ATRNL1Q5VV63 1379 aa17.41■□□□□ 0.38
CNN1-208ENST00000588935 IREB2P48200 963 aaKnown RBP17.41■□□□□ 0.38
CNN1-208ENST00000588935 HUNKP57058 714 aa17.41■□□□□ 0.38
CNN1-208ENST00000588935 HAND2P61296 217 aa17.41■□□□□ 0.38
CNN1-208ENST00000588935 CTDSPL2Q05D32 466 aa17.41■□□□□ 0.38
CNN1-208ENST00000588935 GRM1Q13255 1194 aa17.41■□□□□ 0.38
CNN1-208ENST00000588935 GIMAP6Q6P9H5 292 aa17.41■□□□□ 0.38
CNN1-208ENST00000588935 SLC44A5Q8NCS7 719 aa17.41■□□□□ 0.38
CNN1-208ENST00000588935 WRNIP1Q96S55 665 aa17.41■□□□□ 0.38
CNN1-208ENST00000588935 ANO2Q9NQ90 1003 aa17.41■□□□□ 0.38
CNN1-208ENST00000588935 RAD50Q92878 1312 aa17.41■□□□□ 0.38
CNN1-208ENST00000588935 INPP5BP32019 993 aa17.4■□□□□ 0.38
CNN1-208ENST00000588935 MAP3K9P80192 1104 aa17.4■□□□□ 0.38
CNN1-208ENST00000588935 ZKSCAN4Q969J2 545 aaPredicted RBP17.4■□□□□ 0.38
CNN1-208ENST00000588935 CLMNQ96JQ2 1002 aa17.4■□□□□ 0.38
CNN1-208ENST00000588935 INCENPQ9NQS7 918 aa17.4■□□□□ 0.38
CNN1-208ENST00000588935 ARPP21Q9UBL0 812 aaPredicted RBP17.4■□□□□ 0.38
CNN1-208ENST00000588935 SERPINB13Q9UIV8 391 aa17.4■□□□□ 0.38
CNN1-208ENST00000588935 SIPA1L1O43166 1804 aa17.4■□□□□ 0.38
CNN1-208ENST00000588935 PPARAQ07869 468 aa17.39■□□□□ 0.37
CNN1-208ENST00000588935 ALX1Q15699 326 aa17.39■□□□□ 0.37
CNN1-208ENST00000588935 SBK1Q52WX2 424 aa17.39■□□□□ 0.37
CNN1-208ENST00000588935 KLRG1Q96E93 195 aa17.39■□□□□ 0.37
CNN1-208ENST00000588935 DSCC1Q9BVC3 393 aa17.39■□□□□ 0.37
CNN1-208ENST00000588935 DNAJC18Q9H819 358 aa17.39■□□□□ 0.37
CNN1-208ENST00000588935 COL2A1P02458 1487 aaPredicted RBP17.38■□□□□ 0.37
CNN1-208ENST00000588935 TBC1D12O60347 775 aa17.38■□□□□ 0.37
CNN1-208ENST00000588935 GDF11O95390 407 aa17.38■□□□□ 0.37
CNN1-208ENST00000588935 HSPA6P17066 643 aa17.38■□□□□ 0.37
CNN1-208ENST00000588935 CDK8P49336 464 aa17.38■□□□□ 0.37
CNN1-208ENST00000588935 RRP1BQ14684 758 aaKnown RBP17.38■□□□□ 0.37
CNN1-208ENST00000588935 SAPCD2Q86UD0 394 aa17.38■□□□□ 0.37
CNN1-208ENST00000588935 ELP3Q9H9T3 547 aa17.38■□□□□ 0.37
CNN1-208ENST00000588935 HERC5Q9UII4 1024 aaKnown RBP17.38■□□□□ 0.37
CNN1-208ENST00000588935 TLL2Q9Y6L7 1015 aa17.38■□□□□ 0.37
CNN1-208ENST00000588935 PHF20L1A8MW92 1017 aa17.37■□□□□ 0.37
CNN1-208ENST00000588935 PRDM1O75626 825 aa17.37■□□□□ 0.37
CNN1-208ENST00000588935 FKBP1BP68106 108 aa17.37■□□□□ 0.37
CNN1-208ENST00000588935 MKRN3Q13064 507 aaKnown RBP17.37■□□□□ 0.37
CNN1-208ENST00000588935 SHROOM1Q2M3G4 852 aaPredicted RBP17.37■□□□□ 0.37
CNN1-208ENST00000588935 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.37■□□□□ 0.37
CNN1-208ENST00000588935 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.37■□□□□ 0.37
CNN1-208ENST00000588935 SLC10A4Q96EP9 437 aa17.37■□□□□ 0.37
CNN1-208ENST00000588935 LSG1Q9H089 658 aaKnown RBP17.37■□□□□ 0.37
CNN1-208ENST00000588935 EHD4Q9H223 541 aa17.37■□□□□ 0.37
CNN1-208ENST00000588935 CREBZFQ9NS37 354 aa17.37■□□□□ 0.37
CNN1-208ENST00000588935 TOMM22Q9NS69 142 aa17.37■□□□□ 0.37
CNN1-208ENST00000588935 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.37■□□□□ 0.37
CNN1-208ENST00000588935 CSADQ9Y600 493 aa17.37■□□□□ 0.37
CNN1-208ENST00000588935 DDX60LQ5H9U9 1706 aaKnown RBP17.36■□□□□ 0.37
CNN1-208ENST00000588935 PAPPA2Q9BXP8 1791 aa17.36■□□□□ 0.37
CNN1-208ENST00000588935 MPHOSPH10O00566 681 aaKnown RBP17.36■□□□□ 0.37
CNN1-208ENST00000588935 ZNF213O14771 459 aa17.36■□□□□ 0.37
CNN1-208ENST00000588935 SLC3A2P08195 630 aaKnown RBP17.36■□□□□ 0.37
CNN1-208ENST00000588935 SHMT1P34896 483 aa17.36■□□□□ 0.37
CNN1-208ENST00000588935 ZNF157P51786 506 aaPredicted RBP17.36■□□□□ 0.37
CNN1-208ENST00000588935 MAP3K10Q02779 954 aa17.36■□□□□ 0.37
CNN1-208ENST00000588935 GABPAQ06546 454 aa17.36■□□□□ 0.37
CNN1-208ENST00000588935 DEFB115Q30KQ5 88 aa17.36■□□□□ 0.37
CNN1-208ENST00000588935 CERKLQ49MI3 558 aaPredicted RBP17.36■□□□□ 0.37
CNN1-208ENST00000588935 LDLRAD1Q5T700 205 aa17.36■□□□□ 0.37
CNN1-208ENST00000588935 CCDC84Q86UT8 332 aaPredicted RBP17.36■□□□□ 0.37
CNN1-208ENST00000588935 ANKRD13AQ8IZ07 590 aa17.36■□□□□ 0.37
CNN1-208ENST00000588935 CNKSR2Q8WXI2 1034 aa17.36■□□□□ 0.37
CNN1-208ENST00000588935 MKNK2Q9HBH9 465 aa17.36■□□□□ 0.37
CNN1-208ENST00000588935 CTNNA3Q9UI47 895 aa17.36■□□□□ 0.37
CNN1-208ENST00000588935 ZNF112Q9UJU3 913 aa17.36■□□□□ 0.37
CNN1-208ENST00000588935 RBM8AQ9Y5S9 174 aaKnown RBP17.36■□□□□ 0.37
CNN1-208ENST00000588935 U3KPZ7 1027 aaPredicted RBP17.36■□□□□ 0.37
CNN1-208ENST00000588935 MYH8P13535 1937 aa17.36■□□□□ 0.37
CNN1-208ENST00000588935 JAG1P78504 1218 aa17.35■□□□□ 0.37
CNN1-208ENST00000588935 VGLL4Q14135 290 aa17.35■□□□□ 0.37
CNN1-208ENST00000588935 MAP3K11Q16584 847 aa17.35■□□□□ 0.37
CNN1-208ENST00000588935 RRP12Q5JTH9 1297 aaKnown RBP17.35■□□□□ 0.37
CNN1-208ENST00000588935 CYP4F22Q6NT55 531 aa17.35■□□□□ 0.37
CNN1-208ENST00000588935 RGMBQ6NW40 437 aa17.35■□□□□ 0.37
CNN1-208ENST00000588935 C16orf86Q6ZW13 317 aa17.35■□□□□ 0.37
CNN1-208ENST00000588935 METTL16Q86W50 562 aaKnown RBP17.35■□□□□ 0.37
CNN1-208ENST00000588935 MAP4K1Q92918 833 aa17.35■□□□□ 0.37
CNN1-208ENST00000588935 TACC3Q9Y6A5 838 aa17.35■□□□□ 0.37
CNN1-208ENST00000588935 CTNND1O60716 968 aaKnown RBP17.34■□□□□ 0.37
CNN1-208ENST00000588935 CAP2P40123 477 aa17.34■□□□□ 0.37
CNN1-208ENST00000588935 IMMTQ16891 758 aaKnown RBP17.34■□□□□ 0.37
CNN1-208ENST00000588935 ZNF444Q8N0Y2 327 aaPredicted RBP17.34■□□□□ 0.37
CNN1-208ENST00000588935 PICK1Q9NRD5 415 aa17.34■□□□□ 0.37
CNN1-208ENST00000588935 SWAP70Q9UH65 585 aa17.34■□□□□ 0.37
CNN1-208ENST00000588935 OTOFQ9HC10 1997 aa17.33■□□□□ 0.37
CNN1-208ENST00000588935 LAMB1P07942 1786 aa17.33■□□□□ 0.37
CNN1-208ENST00000588935 GH2P01242 217 aa17.33■□□□□ 0.36
CNN1-208ENST00000588935 AKR1B1P15121 316 aa17.33■□□□□ 0.36
CNN1-208ENST00000588935 PDE4BQ07343 736 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms