RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 IFNL3Q8IZI9 196 aa22.91■■□□□ 1.26
DDX39A-204ENST00000586558 CRACR2BQ8N4Y2 399 aaPredicted RBP22.91■■□□□ 1.26
DDX39A-204ENST00000586558 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.91■■□□□ 1.26
DDX39A-204ENST00000586558 TRIM34Q9BYJ4 488 aa22.91■■□□□ 1.26
DDX39A-204ENST00000586558 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.91■■□□□ 1.26
DDX39A-204ENST00000586558 SERPINB13Q9UIV8 391 aa22.91■■□□□ 1.26
DDX39A-204ENST00000586558 ZNF112Q9UJU3 913 aa22.91■■□□□ 1.26
DDX39A-204ENST00000586558 ZMYM6O95789 1325 aa22.9■■□□□ 1.26
DDX39A-204ENST00000586558 USP17L12C9JPN9 530 aa22.9■■□□□ 1.26
DDX39A-204ENST00000586558 USP17L21D6R901 530 aa22.9■■□□□ 1.26
DDX39A-204ENST00000586558 CDC45O75419 566 aa22.9■■□□□ 1.26
DDX39A-204ENST00000586558 ALX1Q15699 326 aa22.9■■□□□ 1.26
DDX39A-204ENST00000586558 C12orf60Q5U649 245 aa22.9■■□□□ 1.26
DDX39A-204ENST00000586558 ANKRD13AQ8IZ07 590 aa22.9■■□□□ 1.26
DDX39A-204ENST00000586558 WRNIP1Q96S55 665 aa22.9■■□□□ 1.26
DDX39A-204ENST00000586558 NAPBQ9H115 298 aa22.9■■□□□ 1.26
DDX39A-204ENST00000586558 MYH1P12882 1939 aa22.9■■□□□ 1.26
DDX39A-204ENST00000586558 FOXP2O15409 715 aa22.89■■□□□ 1.25
DDX39A-204ENST00000586558 HSPD1P10809 573 aaKnown RBP22.89■■□□□ 1.25
DDX39A-204ENST00000586558 PLCD1P51178 756 aa22.89■■□□□ 1.25
DDX39A-204ENST00000586558 MAP3K9P80192 1104 aa22.89■■□□□ 1.25
DDX39A-204ENST00000586558 CTR9Q6PD62 1173 aa22.89■■□□□ 1.25
DDX39A-204ENST00000586558 FZD1Q9UP38 647 aa22.89■■□□□ 1.25
DDX39A-204ENST00000586558 SGSM2O43147 1006 aa22.88■■□□□ 1.25
DDX39A-204ENST00000586558 SLC4A8Q2Y0W8 1093 aa22.88■■□□□ 1.25
DDX39A-204ENST00000586558 VPS53Q5VIR6 699 aa22.88■■□□□ 1.25
DDX39A-204ENST00000586558 CSADQ9Y600 493 aa22.88■■□□□ 1.25
DDX39A-204ENST00000586558 SIPA1L1O43166 1804 aa22.87■■□□□ 1.25
DDX39A-204ENST00000586558 PHF20L1A8MW92 1017 aa22.87■■□□□ 1.25
DDX39A-204ENST00000586558 CYP2D6P10635 497 aa22.87■■□□□ 1.25
DDX39A-204ENST00000586558 GABPAQ06546 454 aa22.87■■□□□ 1.25
DDX39A-204ENST00000586558 DEFB115Q30KQ5 88 aa22.87■■□□□ 1.25
DDX39A-204ENST00000586558 RGMBQ6NW40 437 aa22.87■■□□□ 1.25
DDX39A-204ENST00000586558 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.87■■□□□ 1.25
DDX39A-204ENST00000586558 DSCC1Q9BVC3 393 aa22.87■■□□□ 1.25
DDX39A-204ENST00000586558 DNAJC18Q9H819 358 aa22.87■■□□□ 1.25
DDX39A-204ENST00000586558 SWAP70Q9UH65 585 aa22.87■■□□□ 1.25
DDX39A-204ENST00000586558 ROBO3Q96MS0 1386 aa22.87■■□□□ 1.25
DDX39A-204ENST00000586558 CTNND1O60716 968 aaKnown RBP22.86■■□□□ 1.25
DDX39A-204ENST00000586558 VGLL4Q14135 290 aa22.86■■□□□ 1.25
DDX39A-204ENST00000586558 NOL9Q5SY16 702 aaKnown RBP22.86■■□□□ 1.25
DDX39A-204ENST00000586558 FAM196BA6NMK8 535 aa22.85■■□□□ 1.25
DDX39A-204ENST00000586558 INPP5BP32019 993 aa22.85■■□□□ 1.25
DDX39A-204ENST00000586558 ZNF157P51786 506 aaPredicted RBP22.85■■□□□ 1.25
DDX39A-204ENST00000586558 HTRA3P83110 453 aa22.85■■□□□ 1.25
DDX39A-204ENST00000586558 CCDC102AQ96A19 550 aa22.85■■□□□ 1.25
DDX39A-204ENST00000586558 SLC10A4Q96EP9 437 aa22.85■■□□□ 1.25
DDX39A-204ENST00000586558 ESYT1Q9BSJ8 1104 aa22.85■■□□□ 1.25
DDX39A-204ENST00000586558 IL25Q9H293 177 aa22.85■■□□□ 1.25
DDX39A-204ENST00000586558 CYP2D7A0A087X1C5 515 aa22.84■■□□□ 1.25
DDX39A-204ENST00000586558 MINDY4BA8MYZ0 360 aa22.84■■□□□ 1.25
DDX39A-204ENST00000586558 FGAP02671 866 aa22.84■■□□□ 1.25
DDX39A-204ENST00000586558 ECE1P42892 770 aa22.84■■□□□ 1.25
DDX39A-204ENST00000586558 TATDN1Q6P1N9 297 aa22.84■■□□□ 1.25
DDX39A-204ENST00000586558 ZKSCAN4Q969J2 545 aaPredicted RBP22.84■■□□□ 1.25
DDX39A-204ENST00000586558 CLMNQ96JQ2 1002 aa22.84■■□□□ 1.25
DDX39A-204ENST00000586558 GINM1Q9NU53 330 aa22.84■■□□□ 1.25
DDX39A-204ENST00000586558 BAZ2AQ9UIF9 1905 aaKnown RBP22.84■■□□□ 1.25
DDX39A-204ENST00000586558 OTOFQ9HC10 1997 aa22.83■■□□□ 1.25
DDX39A-204ENST00000586558 SLC3A2P08195 630 aaKnown RBP22.83■■□□□ 1.25
DDX39A-204ENST00000586558 SLURP2P0DP57 97 aa22.83■■□□□ 1.25
DDX39A-204ENST00000586558 CAP2P40123 477 aa22.83■■□□□ 1.25
DDX39A-204ENST00000586558 C16orf86Q6ZW13 317 aa22.83■■□□□ 1.25
DDX39A-204ENST00000586558 SCYL3Q8IZE3 742 aa22.83■■□□□ 1.25
DDX39A-204ENST00000586558 ZNF287Q9HBT7 754 aa22.83■■□□□ 1.25
DDX39A-204ENST00000586558 CTNNA3Q9UI47 895 aa22.83■■□□□ 1.25
DDX39A-204ENST00000586558 SNCAIPQ9Y6H5 919 aa22.83■■□□□ 1.25
DDX39A-204ENST00000586558 SHMT1P34896 483 aa22.82■■□□□ 1.24
DDX39A-204ENST00000586558 PPARAQ07869 468 aa22.82■■□□□ 1.24
DDX39A-204ENST00000586558 KIAA1211Q6ZU35 1233 aa22.82■■□□□ 1.24
DDX39A-204ENST00000586558 PAXIP1Q6ZW49 1069 aaPredicted RBP22.82■■□□□ 1.24
DDX39A-204ENST00000586558 RASAL3Q86YV0 1011 aa22.82■■□□□ 1.24
DDX39A-204ENST00000586558 CAPNS2Q96L46 248 aa22.82■■□□□ 1.24
DDX39A-204ENST00000586558 PICK1Q9NRD5 415 aa22.82■■□□□ 1.24
DDX39A-204ENST00000586558 ANAPC4Q9UJX5 808 aa22.82■■□□□ 1.24
DDX39A-204ENST00000586558 LAMB1P07942 1786 aa22.81■■□□□ 1.24
DDX39A-204ENST00000586558 SPDYE5A6NIY4 337 aa22.81■■□□□ 1.24
DDX39A-204ENST00000586558 SLC10A3P09131 477 aa22.81■■□□□ 1.24
DDX39A-204ENST00000586558 EVX2Q03828 476 aa22.81■■□□□ 1.24
DDX39A-204ENST00000586558 ERO1BQ86YB8 467 aa22.81■■□□□ 1.24
DDX39A-204ENST00000586558 DYNLL2Q96FJ2 89 aa22.81■■□□□ 1.24
DDX39A-204ENST00000586558 ELP3Q9H9T3 547 aa22.81■■□□□ 1.24
DDX39A-204ENST00000586558 ASNSP08243 561 aa22.8■■□□□ 1.24
DDX39A-204ENST00000586558 ZBTB48P10074 688 aaPredicted RBP22.8■■□□□ 1.24
DDX39A-204ENST00000586558 CDK8P49336 464 aa22.8■■□□□ 1.24
DDX39A-204ENST00000586558 CERKLQ49MI3 558 aaPredicted RBP22.8■■□□□ 1.24
DDX39A-204ENST00000586558 CYP4F22Q6NT55 531 aa22.8■■□□□ 1.24
DDX39A-204ENST00000586558 PDE4BQ07343 736 aa22.79■■□□□ 1.24
DDX39A-204ENST00000586558 NOGQ13253 232 aa22.79■■□□□ 1.24
DDX39A-204ENST00000586558 SPRYD7Q5W111 196 aa22.79■■□□□ 1.24
DDX39A-204ENST00000586558 SLC44A5Q8NCS7 719 aa22.79■■□□□ 1.24
DDX39A-204ENST00000586558 CCDC17Q96LX7 622 aa22.79■■□□□ 1.24
DDX39A-204ENST00000586558 U3KPZ7 1027 aaPredicted RBP22.79■■□□□ 1.24
DDX39A-204ENST00000586558 CEP350Q5VT06 3117 aa22.78■■□□□ 1.24
DDX39A-204ENST00000586558 FAM155AB1AL88 458 aaPredicted RBP22.78■■□□□ 1.24
DDX39A-204ENST00000586558 SMIM22K7EJ46 135 aa22.78■■□□□ 1.24
DDX39A-204ENST00000586558 VEGFBP49765 207 aa22.78■■□□□ 1.24
DDX39A-204ENST00000586558 PPATQ06203 517 aa22.78■■□□□ 1.24
DDX39A-204ENST00000586558 RRP1BQ14684 758 aaKnown RBP22.78■■□□□ 1.24
DDX39A-204ENST00000586558 OPTNQ96CV9 577 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms