RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 NBPF12Q5TAG4 269 aaPredicted RBP16.59■□□□□ 0.25
TRAF4-215ENST00000584944 TTC6Q86TZ1 520 aa16.59■□□□□ 0.25
TRAF4-215ENST00000584944 MYO5AQ9Y4I1 1855 aaKnown RBP16.59■□□□□ 0.25
TRAF4-215ENST00000584944 M0R2C6 588 aa16.58■□□□□ 0.24
TRAF4-215ENST00000584944 CHGBP05060 677 aa16.58■□□□□ 0.24
TRAF4-215ENST00000584944 SLC4A8Q2Y0W8 1093 aa16.58■□□□□ 0.24
TRAF4-215ENST00000584944 SDR42E1Q8WUS8 393 aa16.58■□□□□ 0.24
TRAF4-215ENST00000584944 FAM227BQ96M60 508 aa16.58■□□□□ 0.24
TRAF4-215ENST00000584944 STRBPQ96SI9 672 aaKnown RBP16.58■□□□□ 0.24
TRAF4-215ENST00000584944 DDX4Q9NQI0 724 aaKnown RBP16.58■□□□□ 0.24
TRAF4-215ENST00000584944 PALD1Q9ULE6 856 aa16.58■□□□□ 0.24
TRAF4-215ENST00000584944 ANGEL1Q9UNK9 670 aaKnown RBP16.58■□□□□ 0.24
TRAF4-215ENST00000584944 RPAP1Q9BWH6 1393 aaPredicted RBP16.58■□□□□ 0.24
TRAF4-215ENST00000584944 TM4SF4P48230 202 aa16.57■□□□□ 0.24
TRAF4-215ENST00000584944 KIAA1211Q6ZU35 1233 aa16.57■□□□□ 0.24
TRAF4-215ENST00000584944 MIGA2Q7L4E1 593 aa16.57■□□□□ 0.24
TRAF4-215ENST00000584944 CTU1Q7Z7A3 348 aaKnown RBP16.57■□□□□ 0.24
TRAF4-215ENST00000584944 SEC62Q99442 399 aaKnown RBP16.57■□□□□ 0.24
TRAF4-215ENST00000584944 NAPBQ9H115 298 aa16.57■□□□□ 0.24
TRAF4-215ENST00000584944 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.57■□□□□ 0.24
TRAF4-215ENST00000584944 PI4KBQ9UBF8 816 aa16.57■□□□□ 0.24
TRAF4-215ENST00000584944 MYH7P12883 1935 aa16.57■□□□□ 0.24
TRAF4-215ENST00000584944 CCDC171Q6TFL3 1326 aa16.56■□□□□ 0.24
TRAF4-215ENST00000584944 A0A0D9SFI3 127 aa16.56■□□□□ 0.24
TRAF4-215ENST00000584944 PRKAB2O43741 272 aa16.56■□□□□ 0.24
TRAF4-215ENST00000584944 ZFPM1Q8IX07 1006 aa16.56■□□□□ 0.24
TRAF4-215ENST00000584944 ZNF341Q9BYN7 854 aa16.56■□□□□ 0.24
TRAF4-215ENST00000584944 CSADQ9Y600 493 aa16.56■□□□□ 0.24
TRAF4-215ENST00000584944 PATL2C9JE40 543 aaKnown RBP16.55■□□□□ 0.24
TRAF4-215ENST00000584944 CDC45O75419 566 aa16.55■□□□□ 0.24
TRAF4-215ENST00000584944 TBC1D8O95759 1140 aa16.55■□□□□ 0.24
TRAF4-215ENST00000584944 SLC3A2P08195 630 aaKnown RBP16.55■□□□□ 0.24
TRAF4-215ENST00000584944 LDLRAD1Q5T700 205 aa16.55■□□□□ 0.24
TRAF4-215ENST00000584944 GIMAP6Q6P9H5 292 aa16.55■□□□□ 0.24
TRAF4-215ENST00000584944 CCDC129Q6ZRS4 1044 aa16.55■□□□□ 0.24
TRAF4-215ENST00000584944 TEPSINQ96N21 525 aa16.55■□□□□ 0.24
TRAF4-215ENST00000584944 DCP1AQ9NPI6 582 aaPredicted RBP16.55■□□□□ 0.24
TRAF4-215ENST00000584944 ARPP21Q9UBL0 812 aaPredicted RBP16.55■□□□□ 0.24
TRAF4-215ENST00000584944 HERC5Q9UII4 1024 aaKnown RBP16.55■□□□□ 0.24
TRAF4-215ENST00000584944 AK9Q5TCS8 1911 aa16.55■□□□□ 0.24
TRAF4-215ENST00000584944 RAD50Q92878 1312 aa16.54■□□□□ 0.24
TRAF4-215ENST00000584944 DDTLA6NHG4 134 aaPredicted RBP16.54■□□□□ 0.24
TRAF4-215ENST00000584944 MINDY4BA8MYZ0 360 aa16.54■□□□□ 0.24
TRAF4-215ENST00000584944 CHMLP26374 656 aa16.54■□□□□ 0.24
TRAF4-215ENST00000584944 FOXP4Q8IVH2 680 aaPredicted RBP16.54■□□□□ 0.24
TRAF4-215ENST00000584944 ZNF296Q8WUU4 475 aaPredicted RBP16.54■□□□□ 0.24
TRAF4-215ENST00000584944 WRNIP1Q96S55 665 aa16.54■□□□□ 0.24
TRAF4-215ENST00000584944 ZNF287Q9HBT7 754 aa16.54■□□□□ 0.24
TRAF4-215ENST00000584944 SERPINB13Q9UIV8 391 aa16.54■□□□□ 0.24
TRAF4-215ENST00000584944 COL2A1P02458 1487 aaPredicted RBP16.54■□□□□ 0.24
TRAF4-215ENST00000584944 ATRNL1Q5VV63 1379 aa16.53■□□□□ 0.24
TRAF4-215ENST00000584944 TNRC18O15417 2968 aaPredicted RBP16.53■□□□□ 0.24
TRAF4-215ENST00000584944 MKRN3Q13064 507 aaKnown RBP16.53■□□□□ 0.24
TRAF4-215ENST00000584944 NOM1Q5C9Z4 860 aaKnown RBP16.53■□□□□ 0.24
TRAF4-215ENST00000584944 ANKRD13AQ8IZ07 590 aa16.53■□□□□ 0.24
TRAF4-215ENST00000584944 SLC10A4Q96EP9 437 aa16.53■□□□□ 0.24
TRAF4-215ENST00000584944 PICK1Q9NRD5 415 aa16.53■□□□□ 0.24
TRAF4-215ENST00000584944 PDE4DIPQ5VU43 2346 aa16.52■□□□□ 0.24
TRAF4-215ENST00000584944 GSG1L2A8MUP6 293 aa16.52■□□□□ 0.24
TRAF4-215ENST00000584944 USP17L12C9JPN9 530 aa16.52■□□□□ 0.24
TRAF4-215ENST00000584944 USP17L21D6R901 530 aa16.52■□□□□ 0.24
TRAF4-215ENST00000584944 SREBF2Q12772 1141 aa16.52■□□□□ 0.24
TRAF4-215ENST00000584944 MAP3K11Q16584 847 aa16.52■□□□□ 0.24
TRAF4-215ENST00000584944 SPRYD7Q5W111 196 aa16.52■□□□□ 0.24
TRAF4-215ENST00000584944 CDAN1Q8IWY9 1227 aa16.52■□□□□ 0.24
TRAF4-215ENST00000584944 IFNL3Q8IZI9 196 aa16.52■□□□□ 0.24
TRAF4-215ENST00000584944 CFHR5Q9BXR6 569 aa16.52■□□□□ 0.24
TRAF4-215ENST00000584944 CTNNA3Q9UI47 895 aa16.52■□□□□ 0.24
TRAF4-215ENST00000584944 FZD1Q9UP38 647 aa16.52■□□□□ 0.24
TRAF4-215ENST00000584944 GPR25O00155 361 aa16.51■□□□□ 0.23
TRAF4-215ENST00000584944 MAP3K9P80192 1104 aa16.51■□□□□ 0.23
TRAF4-215ENST00000584944 PKN2Q16513 984 aaKnown RBP16.51■□□□□ 0.23
TRAF4-215ENST00000584944 SH3BP5LQ7L8J4 393 aa16.51■□□□□ 0.23
TRAF4-215ENST00000584944 UNCXA6NJT0 531 aa16.5■□□□□ 0.23
TRAF4-215ENST00000584944 TBC1D12O60347 775 aa16.5■□□□□ 0.23
TRAF4-215ENST00000584944 USP2O75604 605 aaPredicted RBP16.5■□□□□ 0.23
TRAF4-215ENST00000584944 SOX10P56693 466 aa16.5■□□□□ 0.23
TRAF4-215ENST00000584944 CTR9Q6PD62 1173 aa16.5■□□□□ 0.23
TRAF4-215ENST00000584944 ZNF589Q86UQ0 364 aaPredicted RBP16.5■□□□□ 0.23
TRAF4-215ENST00000584944 EHD4Q9H223 541 aa16.5■□□□□ 0.23
TRAF4-215ENST00000584944 R3HDMLQ9H3Y0 253 aa16.5■□□□□ 0.23
TRAF4-215ENST00000584944 MKNK2Q9HBH9 465 aa16.5■□□□□ 0.23
TRAF4-215ENST00000584944 SWAP70Q9UH65 585 aa16.5■□□□□ 0.23
TRAF4-215ENST00000584944 TAOK2Q9UL54 1235 aa16.5■□□□□ 0.23
TRAF4-215ENST00000584944 HPS5Q9UPZ3 1129 aa16.5■□□□□ 0.23
TRAF4-215ENST00000584944 SSC5DA1L4H1 1573 aa16.5■□□□□ 0.23
TRAF4-215ENST00000584944 FAM196BA6NMK8 535 aa16.49■□□□□ 0.23
TRAF4-215ENST00000584944 MPHOSPH10O00566 681 aaKnown RBP16.49■□□□□ 0.23
TRAF4-215ENST00000584944 EIF5BO60841 1220 aaKnown RBP16.49■□□□□ 0.23
TRAF4-215ENST00000584944 HSPD1P10809 573 aaKnown RBP16.49■□□□□ 0.23
TRAF4-215ENST00000584944 PDE4BQ07343 736 aa16.49■□□□□ 0.23
TRAF4-215ENST00000584944 STK11IPQ8N1F8 1099 aa16.49■□□□□ 0.23
TRAF4-215ENST00000584944 CABP5Q9NP86 173 aa16.49■□□□□ 0.23
TRAF4-215ENST00000584944 ANO2Q9NQ90 1003 aa16.49■□□□□ 0.23
TRAF4-215ENST00000584944 TOMM22Q9NS69 142 aa16.49■□□□□ 0.23
TRAF4-215ENST00000584944 CTNND1O60716 968 aaKnown RBP16.48■□□□□ 0.23
TRAF4-215ENST00000584944 SLC34A2O95436 690 aa16.48■□□□□ 0.23
TRAF4-215ENST00000584944 CYP2D6P10635 497 aa16.48■□□□□ 0.23
TRAF4-215ENST00000584944 PLCD1P51178 756 aa16.48■□□□□ 0.23
TRAF4-215ENST00000584944 IMMTQ16891 758 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms