RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 OSBPL5Q9H0X9 879 aaPredicted RBP25.2■■□□□ 1.62
TOP3A-218ENST00000584669 PAG1Q9NWQ8 432 aa25.2■■□□□ 1.62
TOP3A-218ENST00000584669 PHIPQ8WWQ0 1821 aa25.2■■□□□ 1.62
TOP3A-218ENST00000584669 NAV1Q8NEY1 1877 aa25.19■■□□□ 1.62
TOP3A-218ENST00000584669 TGFBRAP1Q8WUH2 860 aa25.19■■□□□ 1.62
TOP3A-218ENST00000584669 COL2A1P02458 1487 aaPredicted RBP25.19■■□□□ 1.62
TOP3A-218ENST00000584669 ECM2O94769 699 aaPredicted RBP25.18■■□□□ 1.62
TOP3A-218ENST00000584669 TSHZ3Q63HK5 1081 aa25.18■■□□□ 1.62
TOP3A-218ENST00000584669 ZCCHC17Q9NP64 241 aaKnown RBP25.18■■□□□ 1.62
TOP3A-218ENST00000584669 ECHDC1Q9NTX5 307 aa25.18■■□□□ 1.62
TOP3A-218ENST00000584669 PTPRFP10586 1907 aa25.18■■□□□ 1.62
TOP3A-218ENST00000584669 TLR2O60603 784 aa25.17■■□□□ 1.62
TOP3A-218ENST00000584669 PDE6AP16499 860 aa25.17■■□□□ 1.62
TOP3A-218ENST00000584669 KIF22Q14807 665 aa25.17■■□□□ 1.62
TOP3A-218ENST00000584669 NOL9Q5SY16 702 aaKnown RBP25.17■■□□□ 1.62
TOP3A-218ENST00000584669 SLC9C2Q5TAH2 1124 aa25.17■■□□□ 1.62
TOP3A-218ENST00000584669 MAPKAPK5Q8IW41 473 aa25.17■■□□□ 1.62
TOP3A-218ENST00000584669 KIAA0100Q14667 2235 aaKnown RBP25.17■■□□□ 1.62
TOP3A-218ENST00000584669 FLT1P17948 1338 aa25.16■■□□□ 1.62
TOP3A-218ENST00000584669 PHF20L1A8MW92 1017 aa25.16■■□□□ 1.62
TOP3A-218ENST00000584669 MAP3K10Q02779 954 aa25.16■■□□□ 1.62
TOP3A-218ENST00000584669 HDAC1Q13547 482 aaPredicted RBP25.16■■□□□ 1.62
TOP3A-218ENST00000584669 AAMPQ13685 434 aa25.16■■□□□ 1.62
TOP3A-218ENST00000584669 DDX60LQ5H9U9 1706 aaKnown RBP25.16■■□□□ 1.62
TOP3A-218ENST00000584669 PICK1Q9NRD5 415 aa25.16■■□□□ 1.62
TOP3A-218ENST00000584669 KCNH4Q9UQ05 1017 aa25.16■■□□□ 1.62
TOP3A-218ENST00000584669 BAZ2AQ9UIF9 1905 aaKnown RBP25.16■■□□□ 1.62
TOP3A-218ENST00000584669 FAM196BA6NMK8 535 aa25.15■■□□□ 1.62
TOP3A-218ENST00000584669 PDHXO00330 501 aa25.15■■□□□ 1.62
TOP3A-218ENST00000584669 SLFNL1Q499Z3 407 aa25.15■■□□□ 1.62
TOP3A-218ENST00000584669 OTUD7AQ8TE49 926 aaPredicted RBP25.15■■□□□ 1.62
TOP3A-218ENST00000584669 ARHGAP39Q9C0H5 1083 aa25.15■■□□□ 1.62
TOP3A-218ENST00000584669 PTCH2Q9Y6C5 1203 aa25.15■■□□□ 1.62
TOP3A-218ENST00000584669 ZNF532Q9HCE3 1301 aa25.14■■□□□ 1.62
TOP3A-218ENST00000584669 TCRBV5S4A2TA0A5A2 114 aa25.14■■□□□ 1.62
TOP3A-218ENST00000584669 POTEFA5A3E0 1075 aa25.14■■□□□ 1.62
TOP3A-218ENST00000584669 TMED8Q6PL24 325 aaPredicted RBP25.14■■□□□ 1.62
TOP3A-218ENST00000584669 ANKRD23Q86SG2 305 aa25.14■■□□□ 1.62
TOP3A-218ENST00000584669 SCYL3Q8IZE3 742 aa25.14■■□□□ 1.62
TOP3A-218ENST00000584669 CPA4Q9UI42 421 aa25.14■■□□□ 1.62
TOP3A-218ENST00000584669 TNRC18O15417 2968 aaPredicted RBP25.13■■□□□ 1.61
TOP3A-218ENST00000584669 LACTBP83111 547 aaPredicted RBP25.13■■□□□ 1.61
TOP3A-218ENST00000584669 SLC9C1Q4G0N8 1177 aa25.13■■□□□ 1.61
TOP3A-218ENST00000584669 ARMC5Q96C12 935 aa25.13■■□□□ 1.61
TOP3A-218ENST00000584669 GPATCH3Q96I76 525 aa25.13■■□□□ 1.61
TOP3A-218ENST00000584669 RIOK1Q9BRS2 568 aaKnown RBP25.13■■□□□ 1.61
TOP3A-218ENST00000584669 SAP30BPQ9UHR5 308 aaKnown RBP25.13■■□□□ 1.61
TOP3A-218ENST00000584669 MAGEB6P1A0A0J9YX57 407 aa25.12■■□□□ 1.61
TOP3A-218ENST00000584669 CHGBP05060 677 aa25.12■■□□□ 1.61
TOP3A-218ENST00000584669 IRX6P78412 446 aaPredicted RBP25.12■■□□□ 1.61
TOP3A-218ENST00000584669 ANKRD45Q5TZF3 282 aa25.12■■□□□ 1.61
TOP3A-218ENST00000584669 GCC1Q96CN9 775 aa25.12■■□□□ 1.61
TOP3A-218ENST00000584669 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.12■■□□□ 1.61
TOP3A-218ENST00000584669 PALD1Q9ULE6 856 aa25.12■■□□□ 1.61
TOP3A-218ENST00000584669 ZHX2Q9Y6X8 837 aa25.12■■□□□ 1.61
TOP3A-218ENST00000584669 ZSWIM8A7E2V4 1837 aa25.12■■□□□ 1.61
TOP3A-218ENST00000584669 TBC1D12O60347 775 aa25.11■■□□□ 1.61
TOP3A-218ENST00000584669 MYCP01106 439 aaPredicted RBP25.11■■□□□ 1.61
TOP3A-218ENST00000584669 ADD2P35612 726 aa25.11■■□□□ 1.61
TOP3A-218ENST00000584669 USP5P45974 858 aa25.11■■□□□ 1.61
TOP3A-218ENST00000584669 CERS3Q8IU89 383 aa25.11■■□□□ 1.61
TOP3A-218ENST00000584669 MYH8P13535 1937 aa25.1■■□□□ 1.61
TOP3A-218ENST00000584669 CXCL11O14625 94 aa25.1■■□□□ 1.61
TOP3A-218ENST00000584669 PTPRAP18433 802 aa25.1■■□□□ 1.61
TOP3A-218ENST00000584669 SLC4A8Q2Y0W8 1093 aa25.1■■□□□ 1.61
TOP3A-218ENST00000584669 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.1■■□□□ 1.61
TOP3A-218ENST00000584669 DHX36Q9H2U1 1008 aaKnown RBP25.1■■□□□ 1.61
TOP3A-218ENST00000584669 MOGSQ13724 837 aa25.09■■□□□ 1.61
TOP3A-218ENST00000584669 PRPF38BQ5VTL8 546 aaKnown RBP25.09■■□□□ 1.61
TOP3A-218ENST00000584669 GADL1Q6ZQY3 521 aa25.09■■□□□ 1.61
TOP3A-218ENST00000584669 PARK7Q99497 189 aaKnown RBP25.09■■□□□ 1.61
TOP3A-218ENST00000584669 TMEM106CQ9BVX2 250 aa25.09■■□□□ 1.61
TOP3A-218ENST00000584669 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.09■■□□□ 1.61
TOP3A-218ENST00000584669 PI4KBQ9UBF8 816 aa25.09■■□□□ 1.61
TOP3A-218ENST00000584669 CTNND1O60716 968 aaKnown RBP25.08■■□□□ 1.61
TOP3A-218ENST00000584669 IGHDP01880 384 aa25.08■■□□□ 1.61
TOP3A-218ENST00000584669 C17orf99Q6UX52 265 aa25.08■■□□□ 1.61
TOP3A-218ENST00000584669 NBPF11Q86T75 865 aa25.08■■□□□ 1.61
TOP3A-218ENST00000584669 LCORLQ8N3X6 602 aa25.08■■□□□ 1.61
TOP3A-218ENST00000584669 PI4K2BQ8TCG2 481 aa25.08■■□□□ 1.61
TOP3A-218ENST00000584669 ZNF333Q96JL9 665 aa25.08■■□□□ 1.61
TOP3A-218ENST00000584669 RWDD1Q9H446 243 aaPredicted RBP25.08■■□□□ 1.61
TOP3A-218ENST00000584669 TTC41PQ6P2S7 1318 aa25.08■■□□□ 1.6
TOP3A-218ENST00000584669 SALL3Q9BXA9 1300 aa25.08■■□□□ 1.6
TOP3A-218ENST00000584669 RRP1BQ14684 758 aaKnown RBP25.07■■□□□ 1.6
TOP3A-218ENST00000584669 CCDC84Q86UT8 332 aaPredicted RBP25.07■■□□□ 1.6
TOP3A-218ENST00000584669 DNAJC18Q9H819 358 aa25.07■■□□□ 1.6
TOP3A-218ENST00000584669 ZBTB47Q9UFB7 747 aaPredicted RBP25.07■■□□□ 1.6
TOP3A-218ENST00000584669 HERC5Q9UII4 1024 aaKnown RBP25.07■■□□□ 1.6
TOP3A-218ENST00000584669 HTTP42858 3142 aa25.07■■□□□ 1.6
TOP3A-218ENST00000584669 TRIM75PA6NK02 468 aa25.06■■□□□ 1.6
TOP3A-218ENST00000584669 FMNL1O95466 1100 aaPredicted RBP25.06■■□□□ 1.6
TOP3A-218ENST00000584669 CYP2C8P10632 490 aa25.06■■□□□ 1.6
TOP3A-218ENST00000584669 EN2P19622 333 aaPredicted RBP25.06■■□□□ 1.6
TOP3A-218ENST00000584669 MX1P20591 662 aa25.06■■□□□ 1.6
TOP3A-218ENST00000584669 PSMC4P43686 418 aa25.06■■□□□ 1.6
TOP3A-218ENST00000584669 GPAT2Q6NUI2 795 aa25.06■■□□□ 1.6
TOP3A-218ENST00000584669 FASTKD5Q7L8L6 764 aaKnown RBP25.06■■□□□ 1.6
TOP3A-218ENST00000584669 SH3TC2Q8TF17 1288 aa25.06■■□□□ 1.6
TOP3A-218ENST00000584669 ARMT1Q9H993 441 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms