RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 CHD8Q9HCK8 2581 aa13.89□□□□□ -0.19
CCDC47-206ENST00000584112 IGFBP4P22692 258 aa13.89□□□□□ -0.19
CCDC47-206ENST00000584112 GYG1P46976 350 aa13.89□□□□□ -0.19
CCDC47-206ENST00000584112 ATN1P54259 1190 aaPredicted RBP13.89□□□□□ -0.19
CCDC47-206ENST00000584112 VPS37DQ86XT2 251 aa13.89□□□□□ -0.19
CCDC47-206ENST00000584112 FAM84BQ96KN1 310 aaPredicted RBP13.89□□□□□ -0.19
CCDC47-206ENST00000584112 PRKAG2Q9UGJ0 569 aa13.89□□□□□ -0.19
CCDC47-206ENST00000584112 KIF16BQ96L93 1317 aa13.89□□□□□ -0.19
CCDC47-206ENST00000584112 ST18O60284 1047 aa13.88□□□□□ -0.19
CCDC47-206ENST00000584112 PDE8BO95263 885 aa13.88□□□□□ -0.19
CCDC47-206ENST00000584112 UBTFL1P0CB47 393 aaPredicted RBP13.88□□□□□ -0.19
CCDC47-206ENST00000584112 LRRC24Q50LG9 513 aa13.88□□□□□ -0.19
CCDC47-206ENST00000584112 CAVIN4Q5BKX8 364 aa13.88□□□□□ -0.19
CCDC47-206ENST00000584112 MFSD14BQ5SR56 506 aa13.88□□□□□ -0.19
CCDC47-206ENST00000584112 RNPC3Q96LT9 517 aaKnown RBP13.88□□□□□ -0.19
CCDC47-206ENST00000584112 WRNIP1Q96S55 665 aa13.88□□□□□ -0.19
CCDC47-206ENST00000584112 PARK7Q99497 189 aaKnown RBP13.88□□□□□ -0.19
CCDC47-206ENST00000584112 NOB1Q9ULX3 412 aaKnown RBP13.88□□□□□ -0.19
CCDC47-206ENST00000584112 PRR33A8MZF0 331 aa13.87□□□□□ -0.19
CCDC47-206ENST00000584112 GPAT2Q6NUI2 795 aa13.87□□□□□ -0.19
CCDC47-206ENST00000584112 VGLL2Q8N8G2 317 aa13.87□□□□□ -0.19
CCDC47-206ENST00000584112 SENP6Q9GZR1 1112 aaPredicted RBP13.87□□□□□ -0.19
CCDC47-206ENST00000584112 JAG2Q9Y219 1238 aa13.87□□□□□ -0.19
CCDC47-206ENST00000584112 ZFHX2Q9C0A1 2572 aaPredicted RBP13.87□□□□□ -0.19
CCDC47-206ENST00000584112 PLXNA1Q9UIW2 1896 aa13.87□□□□□ -0.19
CCDC47-206ENST00000584112 DCHS1Q96JQ0 3298 aa13.86□□□□□ -0.19
CCDC47-206ENST00000584112 MYH2Q9UKX2 1941 aa13.86□□□□□ -0.19
CCDC47-206ENST00000584112 TCP10L2B9ZVM9 353 aa13.86□□□□□ -0.19
CCDC47-206ENST00000584112 PI4K2BG5E9Z4 385 aa13.86□□□□□ -0.19
CCDC47-206ENST00000584112 FRAT2O75474 233 aaPredicted RBP13.86□□□□□ -0.19
CCDC47-206ENST00000584112 IFIT1P09914 478 aaKnown RBP13.86□□□□□ -0.19
CCDC47-206ENST00000584112 RBM5P52756 815 aaKnown RBP eCLIP13.86□□□□□ -0.19
CCDC47-206ENST00000584112 RARSP54136 660 aaKnown RBP13.86□□□□□ -0.19
CCDC47-206ENST00000584112 EPHB4P54760 987 aa13.86□□□□□ -0.19
CCDC47-206ENST00000584112 PUM3Q15397 648 aaKnown RBP13.86□□□□□ -0.19
CCDC47-206ENST00000584112 FBXO33Q7Z6M2 555 aa13.86□□□□□ -0.19
CCDC47-206ENST00000584112 KLHDC4Q8TBB5 520 aa13.86□□□□□ -0.19
CCDC47-206ENST00000584112 TBC1D22AQ8WUA7 517 aa13.86□□□□□ -0.19
CCDC47-206ENST00000584112 ARHGAP45Q92619 1136 aa13.86□□□□□ -0.19
CCDC47-206ENST00000584112 ANKS1AQ92625 1134 aa13.86□□□□□ -0.19
CCDC47-206ENST00000584112 TIFAQ96CG3 184 aa13.86□□□□□ -0.19
CCDC47-206ENST00000584112 ZNF70Q9UC06 446 aaPredicted RBP13.86□□□□□ -0.19
CCDC47-206ENST00000584112 SERPINA10Q9UK55 444 aa13.86□□□□□ -0.19
CCDC47-206ENST00000584112 FBXO3Q9UK99 471 aa13.86□□□□□ -0.19
CCDC47-206ENST00000584112 TTF2Q9UNY4 1162 aaKnown RBP13.86□□□□□ -0.19
CCDC47-206ENST00000584112 ZNF318Q5VUA4 2279 aa13.86□□□□□ -0.19
CCDC47-206ENST00000584112 LRRC37A2A6NM11 1700 aa13.86□□□□□ -0.19
CCDC47-206ENST00000584112 KMT2BQ9UMN6 2715 aaPredicted RBP13.85□□□□□ -0.19
CCDC47-206ENST00000584112 PTPRZ1P23471 2315 aaPredicted RBP13.85□□□□□ -0.19
CCDC47-206ENST00000584112 EYA2O00167 538 aa13.85□□□□□ -0.19
CCDC47-206ENST00000584112 COA7Q96BR5 231 aa13.85□□□□□ -0.19
CCDC47-206ENST00000584112 CD320Q9NPF0 282 aa13.85□□□□□ -0.19
CCDC47-206ENST00000584112 PRDM5Q9NQX1 630 aaPredicted RBP13.85□□□□□ -0.19
CCDC47-206ENST00000584112 IPO8O15397 1037 aaKnown RBP13.84□□□□□ -0.19
CCDC47-206ENST00000584112 SLC5A1P13866 664 aa13.84□□□□□ -0.19
CCDC47-206ENST00000584112 RFX5P48382 616 aaPredicted RBP13.84□□□□□ -0.19
CCDC47-206ENST00000584112 RTP1P59025 263 aa13.84□□□□□ -0.19
CCDC47-206ENST00000584112 TNFAIP1Q13829 316 aa13.84□□□□□ -0.19
CCDC47-206ENST00000584112 SPDYE2Q495Y8 402 aa13.84□□□□□ -0.19
CCDC47-206ENST00000584112 MICALL1Q8N3F8 863 aa13.84□□□□□ -0.19
CCDC47-206ENST00000584112 TRIB2Q92519 343 aa13.84□□□□□ -0.19
CCDC47-206ENST00000584112 TDRD3Q9H7E2 651 aaKnown RBP13.84□□□□□ -0.19
CCDC47-206ENST00000584112 FRMPD3Q5JV73 1810 aa13.83□□□□□ -0.2
CCDC47-206ENST00000584112 CIAO1O76071 339 aa13.83□□□□□ -0.2
CCDC47-206ENST00000584112 PRKAR2AP13861 404 aaKnown RBP13.83□□□□□ -0.2
CCDC47-206ENST00000584112 FGFR2P21802 821 aa13.83□□□□□ -0.2
CCDC47-206ENST00000584112 PBX2P40425 430 aa13.83□□□□□ -0.2
CCDC47-206ENST00000584112 PPATQ06203 517 aa13.83□□□□□ -0.2
CCDC47-206ENST00000584112 CHAF1AQ13111 956 aaPredicted RBP13.83□□□□□ -0.2
CCDC47-206ENST00000584112 LPIN2Q92539 896 aa13.83□□□□□ -0.2
CCDC47-206ENST00000584112 IQSEC3Q9UPP2 1182 aaPredicted RBP13.83□□□□□ -0.2
CCDC47-206ENST00000584112 ATP11BQ9Y2G3 1177 aa13.83□□□□□ -0.2
CCDC47-206ENST00000584112 MAST3O60307 1309 aa13.83□□□□□ -0.2
CCDC47-206ENST00000584112 PLXNB2O15031 1838 aa13.83□□□□□ -0.2
CCDC47-206ENST00000584112 ZFHX4Q86UP3 3567 aa13.82□□□□□ -0.2
CCDC47-206ENST00000584112 GNAI3P08754 354 aa13.82□□□□□ -0.2
CCDC47-206ENST00000584112 CRKP46108 304 aa13.82□□□□□ -0.2
CCDC47-206ENST00000584112 HDLBPQ00341 1268 aaKnown RBP13.82□□□□□ -0.2
CCDC47-206ENST00000584112 LHX8Q68G74 356 aa13.82□□□□□ -0.2
CCDC47-206ENST00000584112 SH3RF1Q7Z6J0 888 aa13.82□□□□□ -0.2
CCDC47-206ENST00000584112 TSPYL2Q9H2G4 693 aaPredicted RBP13.82□□□□□ -0.2
CCDC47-206ENST00000584112 KCNH4Q9UQ05 1017 aa13.82□□□□□ -0.2
CCDC47-206ENST00000584112 SUGT1Q9Y2Z0 365 aa13.82□□□□□ -0.2
CCDC47-206ENST00000584112 LRRFIP2Q9Y608 721 aaKnown RBP13.82□□□□□ -0.2
CCDC47-206ENST00000584112 TLL1O43897 1013 aa13.81□□□□□ -0.2
CCDC47-206ENST00000584112 INPP5BP32019 993 aa13.81□□□□□ -0.2
CCDC47-206ENST00000584112 TNNI2P48788 182 aa13.81□□□□□ -0.2
CCDC47-206ENST00000584112 AAK1Q2M2I8 961 aa13.81□□□□□ -0.2
CCDC47-206ENST00000584112 MAP3K21Q5TCX8 1036 aa13.81□□□□□ -0.2
CCDC47-206ENST00000584112 DIEXFQ68CQ4 756 aaKnown RBP13.81□□□□□ -0.2
CCDC47-206ENST00000584112 ATG9AQ7Z3C6 839 aa13.81□□□□□ -0.2
CCDC47-206ENST00000584112 DZIP1LQ8IYY4 767 aaKnown RBP13.81□□□□□ -0.2
CCDC47-206ENST00000584112 COL26A1Q96A83 441 aa13.81□□□□□ -0.2
CCDC47-206ENST00000584112 SIL1Q9H173 461 aa13.81□□□□□ -0.2
CCDC47-206ENST00000584112 CEP126Q9P2H0 1117 aa13.81□□□□□ -0.2
CCDC47-206ENST00000584112 PRRC2BQ5JSZ5 2229 aaKnown RBP13.8□□□□□ -0.2
CCDC47-206ENST00000584112 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.8□□□□□ -0.2
CCDC47-206ENST00000584112 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.8□□□□□ -0.2
CCDC47-206ENST00000584112 GRXCR1A8MXD5 290 aa13.8□□□□□ -0.2
CCDC47-206ENST00000584112 CCND3P30281 292 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms