RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-218	ENST00000583821	FAM151A	Q8WW52	585 aa		10.06	□□□□□ -0.8
MSI2-218	ENST00000583821	MRI	Q9BWK5	157 aa		10.06	□□□□□ -0.8
MSI2-218	ENST00000583821	ZNF341	Q9BYN7	854 aa		10.06	□□□□□ -0.8
MSI2-218	ENST00000583821	CEP126	Q9P2H0	1117 aa		10.06	□□□□□ -0.8
MSI2-218	ENST00000583821	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	10.06	□□□□□ -0.8
MSI2-218	ENST00000583821	LOC285556	D6RIA3	1793 aa		10.06	□□□□□ -0.8
MSI2-218	ENST00000583821	EVI5	O60447	810 aa		10.05	□□□□□ -0.8
MSI2-218	ENST00000583821	CTGF	P29279	349 aa		10.05	□□□□□ -0.8
MSI2-218	ENST00000583821	RARS	P54136	660 aa	Known RBP	10.05	□□□□□ -0.8
MSI2-218	ENST00000583821	MOGS	Q13724	837 aa		10.05	□□□□□ -0.8
MSI2-218	ENST00000583821	RASGRF1	Q13972	1273 aa		10.05	□□□□□ -0.8
MSI2-218	ENST00000583821	CCDC102B	Q68D86	513 aa		10.05	□□□□□ -0.8
MSI2-218	ENST00000583821	SH3TC2	Q8TF17	1288 aa		10.05	□□□□□ -0.8
MSI2-218	ENST00000583821	ZNF333	Q96JL9	665 aa		10.05	□□□□□ -0.8
MSI2-218	ENST00000583821	API5	Q9BZZ5	524 aa	Known RBP	10.05	□□□□□ -0.8
MSI2-218	ENST00000583821	USP40	Q9NVE5	1235 aa		10.05	□□□□□ -0.8
MSI2-218	ENST00000583821	CPA4	Q9UI42	421 aa		10.05	□□□□□ -0.8
MSI2-218	ENST00000583821	ADGRA2	Q96PE1	1338 aa		10.05	□□□□□ -0.8
MSI2-218	ENST00000583821	SALL1	Q9NSC2	1324 aa		10.05	□□□□□ -0.8
MSI2-218	ENST00000583821	DOCK3	Q8IZD9	2030 aa		10.04	□□□□□ -0.8
MSI2-218	ENST00000583821	TBC1D12	O60347	775 aa		10.04	□□□□□ -0.8
MSI2-218	ENST00000583821	TLR2	O60603	784 aa		10.04	□□□□□ -0.8
MSI2-218	ENST00000583821	IL15	P40933	162 aa	Predicted RBP	10.04	□□□□□ -0.8
MSI2-218	ENST00000583821	RGS3	P49796	1198 aa		10.04	□□□□□ -0.8
MSI2-218	ENST00000583821	LACTB	P83111	547 aa	Predicted RBP	10.04	□□□□□ -0.8
MSI2-218	ENST00000583821	TFCP2	Q12800	502 aa		10.04	□□□□□ -0.8
MSI2-218	ENST00000583821	SLC9C1	Q4G0N8	1177 aa		10.04	□□□□□ -0.8
MSI2-218	ENST00000583821	INTS3	Q68E01	1043 aa	Known RBP	10.04	□□□□□ -0.8
MSI2-218	ENST00000583821	SH3BP5L	Q7L8J4	393 aa		10.04	□□□□□ -0.8
MSI2-218	ENST00000583821	HOOK2	Q96ED9	719 aa		10.04	□□□□□ -0.8
MSI2-218	ENST00000583821	COPRS	Q9NQ92	184 aa		10.04	□□□□□ -0.8
MSI2-218	ENST00000583821	GNL3L	Q9NVN8	582 aa	Known RBP	10.04	□□□□□ -0.8
MSI2-218	ENST00000583821	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.04	□□□□□ -0.8
MSI2-218	ENST00000583821	ZNF112	Q9UJU3	913 aa		10.04	□□□□□ -0.8
MSI2-218	ENST00000583821	PDHX	O00330	501 aa		10.03	□□□□□ -0.8
MSI2-218	ENST00000583821	TIMM10	P62072	90 aa		10.03	□□□□□ -0.8
MSI2-218	ENST00000583821	PPAT	Q06203	517 aa		10.03	□□□□□ -0.8
MSI2-218	ENST00000583821	PI16	Q6UXB8	463 aa		10.03	□□□□□ -0.8
MSI2-218	ENST00000583821	CCDC84	Q86UT8	332 aa	Predicted RBP	10.03	□□□□□ -0.8
MSI2-218	ENST00000583821	ZNF384	Q8TF68	577 aa		10.03	□□□□□ -0.8
MSI2-218	ENST00000583821	TRIM47	Q96LD4	638 aa		10.03	□□□□□ -0.8
MSI2-218	ENST00000583821	DDX4	Q9NQI0	724 aa	Known RBP	10.03	□□□□□ -0.8
MSI2-218	ENST00000583821	ABCF2	Q9UG63	623 aa		10.03	□□□□□ -0.8
MSI2-218	ENST00000583821	DENND2A	Q9ULE3	1009 aa		10.03	□□□□□ -0.8
MSI2-218	ENST00000583821	KCNH4	Q9UQ05	1017 aa		10.03	□□□□□ -0.8
MSI2-218	ENST00000583821	SZT2	Q5T011	3432 aa		10.03	□□□□□ -0.8
MSI2-218	ENST00000583821	GAK	O14976	1311 aa		10.03	□□□□□ -0.8
MSI2-218	ENST00000583821	ALPK3	Q96L96	1907 aa		10.02	□□□□□ -0.81
MSI2-218	ENST00000583821		A0A1B0GUL7	405 aa		10.02	□□□□□ -0.81
MSI2-218	ENST00000583821	DDTL	A6NHG4	134 aa	Predicted RBP	10.02	□□□□□ -0.81
MSI2-218	ENST00000583821	PHF20L1	A8MW92	1017 aa		10.02	□□□□□ -0.81
MSI2-218	ENST00000583821	SEMA3E	O15041	775 aa		10.02	□□□□□ -0.81
MSI2-218	ENST00000583821	SRGAP3	O43295	1099 aa		10.02	□□□□□ -0.81
MSI2-218	ENST00000583821	CT47B1	P0C2W7	299 aa	Predicted RBP	10.02	□□□□□ -0.81
MSI2-218	ENST00000583821	PICALM	Q13492	652 aa		10.02	□□□□□ -0.81
MSI2-218	ENST00000583821	NOL9	Q5SY16	702 aa	Known RBP	10.02	□□□□□ -0.81
MSI2-218	ENST00000583821	GPAT2	Q6NUI2	795 aa		10.02	□□□□□ -0.81
MSI2-218	ENST00000583821	C17orf99	Q6UX52	265 aa		10.02	□□□□□ -0.81
MSI2-218	ENST00000583821	ANKRD23	Q86SG2	305 aa		10.02	□□□□□ -0.81
MSI2-218	ENST00000583821	DZIP1	Q86YF9	867 aa	Known RBP	10.02	□□□□□ -0.81
MSI2-218	ENST00000583821	XAGE2	Q96GT9	111 aa		10.02	□□□□□ -0.81
MSI2-218	ENST00000583821	ZCCHC17	Q9NP64	241 aa	Known RBP	10.02	□□□□□ -0.81
MSI2-218	ENST00000583821	MROH7-TTC4	A0A0A0MT08	1334 aa		10.02	□□□□□ -0.81
MSI2-218	ENST00000583821	PLXNB2	O15031	1838 aa		10.01	□□□□□ -0.81
MSI2-218	ENST00000583821	FAM196B	A6NMK8	535 aa		10.01	□□□□□ -0.81
MSI2-218	ENST00000583821	WDHD1	O75717	1129 aa	Predicted RBP	10.01	□□□□□ -0.81
MSI2-218	ENST00000583821	BCAR3	O75815	825 aa		10.01	□□□□□ -0.81
MSI2-218	ENST00000583821	CYP2C8	P10632	490 aa		10.01	□□□□□ -0.81
MSI2-218	ENST00000583821	TRIM27	P14373	513 aa		10.01	□□□□□ -0.81
MSI2-218	ENST00000583821	BTD	P43251	543 aa		10.01	□□□□□ -0.81
MSI2-218	ENST00000583821	MECOM	Q03112	1051 aa		10.01	□□□□□ -0.81
MSI2-218	ENST00000583821	KIF22	Q14807	665 aa		10.01	□□□□□ -0.81
MSI2-218	ENST00000583821	CLUAP1	Q96AJ1	413 aa		10.01	□□□□□ -0.81
MSI2-218	ENST00000583821	MYH1	P12882	1939 aa		10.01	□□□□□ -0.81
MSI2-218	ENST00000583821	PNMA6E	A0A0J9YXQ4	647 aa		10	□□□□□ -0.81
MSI2-218	ENST00000583821	ENTPD3	O75355	529 aa		10	□□□□□ -0.81
MSI2-218	ENST00000583821	GNAI3	P08754	354 aa		10	□□□□□ -0.81
MSI2-218	ENST00000583821	OSBP	P22059	807 aa		10	□□□□□ -0.81
MSI2-218	ENST00000583821	PSMC4	P43686	418 aa		10	□□□□□ -0.81
MSI2-218	ENST00000583821	MTX1	Q13505	466 aa		10	□□□□□ -0.81
MSI2-218	ENST00000583821	MTFR1	Q15390	333 aa		10	□□□□□ -0.81
MSI2-218	ENST00000583821	SLC4A8	Q2Y0W8	1093 aa		10	□□□□□ -0.81
MSI2-218	ENST00000583821	GADL1	Q6ZQY3	521 aa		10	□□□□□ -0.81
MSI2-218	ENST00000583821	TBC1D9	Q6ZT07	1266 aa		10	□□□□□ -0.81
MSI2-218	ENST00000583821	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10	□□□□□ -0.81
MSI2-218	ENST00000583821	SCYL3	Q8IZE3	742 aa		10	□□□□□ -0.81
MSI2-218	ENST00000583821	FRAT1	Q92837	279 aa	Predicted RBP	10	□□□□□ -0.81
MSI2-218	ENST00000583821	SHISA4	Q96DD7	197 aa		10	□□□□□ -0.81
MSI2-218	ENST00000583821	NEUROD6	Q96NK8	337 aa		10	□□□□□ -0.81
MSI2-218	ENST00000583821	IDI2	Q9BXS1	227 aa		10	□□□□□ -0.81
MSI2-218	ENST00000583821	HMG20B	Q9P0W2	317 aa		10	□□□□□ -0.81
MSI2-218	ENST00000583821	PDS5A	Q29RF7	1337 aa	Known RBP	10	□□□□□ -0.81
MSI2-218	ENST00000583821		A0A0G2JLL6	359 aa	Predicted RBP	9.99	□□□□□ -0.81
MSI2-218	ENST00000583821	TRIM75P	A6NK02	468 aa		9.99	□□□□□ -0.81
MSI2-218	ENST00000583821	CCER2	I3L3R5	266 aa		9.99	□□□□□ -0.81
MSI2-218	ENST00000583821	FMNL1	O95466	1100 aa	Predicted RBP	9.99	□□□□□ -0.81
MSI2-218	ENST00000583821	PTPRA	P18433	802 aa		9.99	□□□□□ -0.81
MSI2-218	ENST00000583821	RHBDL3	P58872	404 aa		9.99	□□□□□ -0.81
MSI2-218	ENST00000583821	MVP	Q14764	893 aa	Known RBP	9.99	□□□□□ -0.81
MSI2-218	ENST00000583821	ARHGEF6	Q15052	776 aa		9.99	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms