RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 TAF7LQ5H9L4 462 aa9.09□□□□□ -0.95
CDK5RAP3-209ENST00000578663 APOBEC3HQ6NTF7 200 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-209ENST00000578663 HHIPL2Q6UWX4 724 aa9.09□□□□□ -0.95
CDK5RAP3-209ENST00000578663 PRRT2Q7Z6L0 340 aaPredicted RBP9.09□□□□□ -0.95
CDK5RAP3-209ENST00000578663 FAM151AQ8WW52 585 aa9.09□□□□□ -0.95
CDK5RAP3-209ENST00000578663 ANKS1AQ92625 1134 aa9.09□□□□□ -0.95
CDK5RAP3-209ENST00000578663 COA7Q96BR5 231 aa9.09□□□□□ -0.95
CDK5RAP3-209ENST00000578663 GAS2L1Q99501 681 aaPredicted RBP9.09□□□□□ -0.95
CDK5RAP3-209ENST00000578663 CD320Q9NPF0 282 aa9.09□□□□□ -0.95
CDK5RAP3-209ENST00000578663 CNNM1Q9NRU3 951 aa9.09□□□□□ -0.95
CDK5RAP3-209ENST00000578663 PRRC2BQ5JSZ5 2229 aaKnown RBP9.09□□□□□ -0.95
CDK5RAP3-209ENST00000578663 A0A0G2JMZ2 1700 aa9.08□□□□□ -0.96
CDK5RAP3-209ENST00000578663 UNC79Q9P2D8 2635 aa9.08□□□□□ -0.96
CDK5RAP3-209ENST00000578663 ITGB8P26012 769 aa9.08□□□□□ -0.96
CDK5RAP3-209ENST00000578663 FLIIQ13045 1269 aa9.08□□□□□ -0.96
CDK5RAP3-209ENST00000578663 KCTD2Q14681 263 aa9.08□□□□□ -0.96
CDK5RAP3-209ENST00000578663 GRIK5Q16478 980 aa9.08□□□□□ -0.96
CDK5RAP3-209ENST00000578663 FAM110CQ1W6H9 321 aa9.08□□□□□ -0.96
CDK5RAP3-209ENST00000578663 CCDC184Q52MB2 194 aa9.08□□□□□ -0.96
CDK5RAP3-209ENST00000578663 FBXO33Q7Z6M2 555 aa9.08□□□□□ -0.96
CDK5RAP3-209ENST00000578663 TSPYL6Q8N831 410 aa9.08□□□□□ -0.96
CDK5RAP3-209ENST00000578663 PRDM12Q9H4Q4 367 aa9.08□□□□□ -0.96
CDK5RAP3-209ENST00000578663 ADAMTS8Q9UP79 889 aa9.08□□□□□ -0.96
CDK5RAP3-209ENST00000578663 CHMP3Q9Y3E7 222 aa9.08□□□□□ -0.96
CDK5RAP3-209ENST00000578663 ATRNL1Q5VV63 1379 aa9.08□□□□□ -0.96
CDK5RAP3-209ENST00000578663 RIF1Q5UIP0 2472 aaKnown RBP9.08□□□□□ -0.96
CDK5RAP3-209ENST00000578663 KIF16BQ96L93 1317 aa9.07□□□□□ -0.96
CDK5RAP3-209ENST00000578663 FAM186AA6NE01 2351 aa9.07□□□□□ -0.96
CDK5RAP3-209ENST00000578663 TLL1O43897 1013 aa9.07□□□□□ -0.96
CDK5RAP3-209ENST00000578663 PLIN1O60240 522 aa9.07□□□□□ -0.96
CDK5RAP3-209ENST00000578663 LMBR1LQ6UX01 489 aa9.07□□□□□ -0.96
CDK5RAP3-209ENST00000578663 MIGA2Q7L4E1 593 aa9.07□□□□□ -0.96
CDK5RAP3-209ENST00000578663 G2E3Q7L622 706 aa9.07□□□□□ -0.96
CDK5RAP3-209ENST00000578663 ERMP1Q7Z2K6 904 aa9.07□□□□□ -0.96
CDK5RAP3-209ENST00000578663 VPS37DQ86XT2 251 aa9.07□□□□□ -0.96
CDK5RAP3-209ENST00000578663 SMCR8Q8TEV9 937 aaPredicted RBP9.07□□□□□ -0.96
CDK5RAP3-209ENST00000578663 HMX1Q9NP08 348 aaPredicted RBP9.07□□□□□ -0.96
CDK5RAP3-209ENST00000578663 FASNP49327 2511 aaKnown RBP9.07□□□□□ -0.96
CDK5RAP3-209ENST00000578663 DOCK2Q92608 1830 aa9.07□□□□□ -0.96
CDK5RAP3-209ENST00000578663 ACACBO00763 2458 aa9.07□□□□□ -0.96
CDK5RAP3-209ENST00000578663 MROH5Q6ZUA9 1318 aa9.06□□□□□ -0.96
CDK5RAP3-209ENST00000578663 NCOR2Q9Y618 2525 aa9.06□□□□□ -0.96
CDK5RAP3-209ENST00000578663 SLC4A2P04920 1241 aa9.06□□□□□ -0.96
CDK5RAP3-209ENST00000578663 FKBP5Q13451 457 aaPredicted RBP9.06□□□□□ -0.96
CDK5RAP3-209ENST00000578663 CAVIN4Q5BKX8 364 aa9.06□□□□□ -0.96
CDK5RAP3-209ENST00000578663 SCYL3Q8IZE3 742 aa9.06□□□□□ -0.96
CDK5RAP3-209ENST00000578663 PICK1Q9NRD5 415 aa9.06□□□□□ -0.96
CDK5RAP3-209ENST00000578663 PNMA3Q9UL41 463 aa9.06□□□□□ -0.96
CDK5RAP3-209ENST00000578663 DOCK1Q14185 1865 aa9.06□□□□□ -0.96
CDK5RAP3-209ENST00000578663 MAP1BP46821 2468 aaKnown RBP9.06□□□□□ -0.96
CDK5RAP3-209ENST00000578663 CACNA1HO95180 2353 aa9.05□□□□□ -0.96
CDK5RAP3-209ENST00000578663 LOC285556D6RIA3 1793 aa9.05□□□□□ -0.96
CDK5RAP3-209ENST00000578663 APAF1O14727 1248 aa9.05□□□□□ -0.96
CDK5RAP3-209ENST00000578663 FRAT2O75474 233 aaPredicted RBP9.05□□□□□ -0.96
CDK5RAP3-209ENST00000578663 GCLCP48506 637 aaPredicted RBP9.05□□□□□ -0.96
CDK5RAP3-209ENST00000578663 CHAF1AQ13111 956 aaPredicted RBP9.05□□□□□ -0.96
CDK5RAP3-209ENST00000578663 TWISTNBQ3B726 338 aaPredicted RBP9.05□□□□□ -0.96
CDK5RAP3-209ENST00000578663 MAP3K21Q5TCX8 1036 aa9.05□□□□□ -0.96
CDK5RAP3-209ENST00000578663 MIER1Q8N108 512 aa9.05□□□□□ -0.96
CDK5RAP3-209ENST00000578663 BADQ92934 168 aa9.05□□□□□ -0.96
CDK5RAP3-209ENST00000578663 ZNF594Q96JF6 807 aaPredicted RBP9.05□□□□□ -0.96
CDK5RAP3-209ENST00000578663 UIMC1Q96RL1 719 aa9.05□□□□□ -0.96
CDK5RAP3-209ENST00000578663 SPINK5Q9NQ38 1064 aaPredicted RBP9.05□□□□□ -0.96
CDK5RAP3-209ENST00000578663 AGTPBP1Q9UPW5 1226 aa9.05□□□□□ -0.96
CDK5RAP3-209ENST00000578663 AFG3L2Q9Y4W6 797 aa9.05□□□□□ -0.96
CDK5RAP3-209ENST00000578663 DNAH14Q0VDD8 3507 aa9.05□□□□□ -0.96
CDK5RAP3-209ENST00000578663 DMDP11532 3685 aa9.05□□□□□ -0.96
CDK5RAP3-209ENST00000578663 PHIPQ8WWQ0 1821 aa9.05□□□□□ -0.96
CDK5RAP3-209ENST00000578663 MYH13Q9UKX3 1938 aa9.04□□□□□ -0.96
CDK5RAP3-209ENST00000578663 PHF20L1A8MW92 1017 aa9.04□□□□□ -0.96
CDK5RAP3-209ENST00000578663 GRM8O00222 908 aa9.04□□□□□ -0.96
CDK5RAP3-209ENST00000578663 PTPRAP18433 802 aa9.04□□□□□ -0.96
CDK5RAP3-209ENST00000578663 EPHB4P54760 987 aa9.04□□□□□ -0.96
CDK5RAP3-209ENST00000578663 MAP3K10Q02779 954 aa9.04□□□□□ -0.96
CDK5RAP3-209ENST00000578663 COL9A2Q14055 689 aaPredicted RBP9.04□□□□□ -0.96
CDK5RAP3-209ENST00000578663 AAK1Q2M2I8 961 aa9.04□□□□□ -0.96
CDK5RAP3-209ENST00000578663 EPHA10Q5JZY3 1008 aa9.04□□□□□ -0.96
CDK5RAP3-209ENST00000578663 BEND3Q5T5X7 828 aa9.04□□□□□ -0.96
CDK5RAP3-209ENST00000578663 GADL1Q6ZQY3 521 aa9.04□□□□□ -0.96
CDK5RAP3-209ENST00000578663 PROCA1Q8NCQ7 364 aaPredicted RBP9.04□□□□□ -0.96
CDK5RAP3-209ENST00000578663 TIFAQ96CG3 184 aa9.04□□□□□ -0.96
CDK5RAP3-209ENST00000578663 GJD2Q9UKL4 321 aa9.04□□□□□ -0.96
CDK5RAP3-209ENST00000578663 TAOK2Q9UL54 1235 aa9.04□□□□□ -0.96
CDK5RAP3-209ENST00000578663 ZHX2Q9Y6X8 837 aa9.04□□□□□ -0.96
CDK5RAP3-209ENST00000578663 WDR87Q6ZQQ6 2873 aa9.03□□□□□ -0.96
CDK5RAP3-209ENST00000578663 RFX7Q2KHR2 1363 aa9.03□□□□□ -0.96
CDK5RAP3-209ENST00000578663 ERC2O15083 957 aa9.03□□□□□ -0.96
CDK5RAP3-209ENST00000578663 XRCC5P13010 732 aaKnown RBP9.03□□□□□ -0.96
CDK5RAP3-209ENST00000578663 NFIAQ12857 509 aa9.03□□□□□ -0.96
CDK5RAP3-209ENST00000578663 CDC42EP5Q6NZY7 148 aa9.03□□□□□ -0.96
CDK5RAP3-209ENST00000578663 TRMT44Q8IYL2 757 aaKnown RBP9.03□□□□□ -0.96
CDK5RAP3-209ENST00000578663 ANKRD13CQ8N6S4 541 aa9.03□□□□□ -0.96
CDK5RAP3-209ENST00000578663 VGLL2Q8N8G2 317 aa9.03□□□□□ -0.96
CDK5RAP3-209ENST00000578663 WDR66Q8TBY9 1149 aa9.03□□□□□ -0.96
CDK5RAP3-209ENST00000578663 RNPC3Q96LT9 517 aaKnown RBP9.03□□□□□ -0.96
CDK5RAP3-209ENST00000578663 MRS2Q9HD23 443 aa9.03□□□□□ -0.96
CDK5RAP3-209ENST00000578663 FAM198AQ9UFP1 575 aa9.03□□□□□ -0.96
CDK5RAP3-209ENST00000578663 IQSEC3Q9UPP2 1182 aaPredicted RBP9.03□□□□□ -0.96
CDK5RAP3-209ENST00000578663 DAGLAQ9Y4D2 1042 aa9.03□□□□□ -0.96
CDK5RAP3-209ENST00000578663 IL16Q14005 1332 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms