RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 KIF1BPQ96EK5 621 aa16.99■□□□□ 0.31
SREBF1-217ENST00000577897 FAM161BQ96MY7 647 aa16.99■□□□□ 0.31
SREBF1-217ENST00000577897 CDC45O75419 566 aa16.98■□□□□ 0.31
SREBF1-217ENST00000577897 SURF6O75683 361 aaKnown RBP16.98■□□□□ 0.31
SREBF1-217ENST00000577897 OS9Q13438 667 aaPredicted RBP16.98■□□□□ 0.31
SREBF1-217ENST00000577897 GADL1Q6ZQY3 521 aa16.98■□□□□ 0.31
SREBF1-217ENST00000577897 PLEKHM2Q8IWE5 1019 aa16.98■□□□□ 0.31
SREBF1-217ENST00000577897 ZDHHC15Q96MV8 337 aa16.98■□□□□ 0.31
SREBF1-217ENST00000577897 NBPF3Q9H094 633 aa16.98■□□□□ 0.31
SREBF1-217ENST00000577897 NOP58Q9Y2X3 529 aaKnown RBP16.98■□□□□ 0.31
SREBF1-217ENST00000577897 DDX60LQ5H9U9 1706 aaKnown RBP16.97■□□□□ 0.31
SREBF1-217ENST00000577897 NBPF7P0C2Y1 421 aaPredicted RBP16.97■□□□□ 0.31
SREBF1-217ENST00000577897 TCP10Q12799 353 aa16.97■□□□□ 0.31
SREBF1-217ENST00000577897 TTC22Q5TAA0 569 aa16.97■□□□□ 0.31
SREBF1-217ENST00000577897 FKBP1CQ5VVH2 108 aa16.97■□□□□ 0.31
SREBF1-217ENST00000577897 APOBEC3HQ6NTF7 200 aaKnown RBP16.97■□□□□ 0.31
SREBF1-217ENST00000577897 ANKLE1Q8NAG6 615 aa16.97■□□□□ 0.31
SREBF1-217ENST00000577897 SMCR8Q8TEV9 937 aaPredicted RBP16.97■□□□□ 0.31
SREBF1-217ENST00000577897 TBC1D22AQ8WUA7 517 aa16.97■□□□□ 0.31
SREBF1-217ENST00000577897 OSBPL3Q9H4L5 887 aa16.97■□□□□ 0.31
SREBF1-217ENST00000577897 C11orf49Q9H6J7 331 aa16.97■□□□□ 0.31
SREBF1-217ENST00000577897 PNMA6EA0A0J9YXQ4 647 aa16.96■□□□□ 0.31
SREBF1-217ENST00000577897 APBB1O00213 710 aa16.96■□□□□ 0.31
SREBF1-217ENST00000577897 EPHA10Q5JZY3 1008 aa16.96■□□□□ 0.31
SREBF1-217ENST00000577897 COA7Q96BR5 231 aa16.96■□□□□ 0.31
SREBF1-217ENST00000577897 GPATCH3Q96I76 525 aa16.96■□□□□ 0.31
SREBF1-217ENST00000577897 GUCD1Q96NT3 240 aa16.96■□□□□ 0.31
SREBF1-217ENST00000577897 ZNF112Q9UJU3 913 aa16.96■□□□□ 0.31
SREBF1-217ENST00000577897 EXOC6BQ9Y2D4 811 aa16.96■□□□□ 0.31
SREBF1-217ENST00000577897 AK9Q5TCS8 1911 aa16.96■□□□□ 0.3
SREBF1-217ENST00000577897 CXCL11O14625 94 aa16.95■□□□□ 0.3
SREBF1-217ENST00000577897 NOL9Q5SY16 702 aaKnown RBP16.95■□□□□ 0.3
SREBF1-217ENST00000577897 FAM109BQ6ICB4 259 aaPredicted RBP16.95■□□□□ 0.3
SREBF1-217ENST00000577897 FASTKD5Q7L8L6 764 aaKnown RBP16.95■□□□□ 0.3
SREBF1-217ENST00000577897 FAM151AQ8WW52 585 aa16.95■□□□□ 0.3
SREBF1-217ENST00000577897 PUS3Q9BZE2 481 aaKnown RBP16.95■□□□□ 0.3
SREBF1-217ENST00000577897 MAST3O60307 1309 aa16.95■□□□□ 0.3
SREBF1-217ENST00000577897 G3BP1Q13283 466 aaKnown RBP eCLIP16.94■□□□□ 0.3
SREBF1-217ENST00000577897 ANKRD13CQ8N6S4 541 aa16.94■□□□□ 0.3
SREBF1-217ENST00000577897 ZHX2Q9Y6X8 837 aa16.94■□□□□ 0.3
SREBF1-217ENST00000577897 A0A0G2JLL6 359 aaPredicted RBP16.93■□□□□ 0.3
SREBF1-217ENST00000577897 HMGCRP04035 888 aa16.93■□□□□ 0.3
SREBF1-217ENST00000577897 MX1P20591 662 aa16.93■□□□□ 0.3
SREBF1-217ENST00000577897 MDM2Q00987 491 aaPredicted RBP16.93■□□□□ 0.3
SREBF1-217ENST00000577897 CAVIN4Q5BKX8 364 aa16.93■□□□□ 0.3
SREBF1-217ENST00000577897 PRRT2Q7Z6L0 340 aaPredicted RBP16.93■□□□□ 0.3
SREBF1-217ENST00000577897 FBXO33Q7Z6M2 555 aa16.93■□□□□ 0.3
SREBF1-217ENST00000577897 CLASRPQ8N2M8 674 aaKnown RBP16.93■□□□□ 0.3
SREBF1-217ENST00000577897 HMX1Q9NP08 348 aaPredicted RBP16.93■□□□□ 0.3
SREBF1-217ENST00000577897 POTEB2H3BUK9 544 aa16.92■□□□□ 0.3
SREBF1-217ENST00000577897 PDE1AP54750 535 aa16.92■□□□□ 0.3
SREBF1-217ENST00000577897 TRIM32Q13049 653 aa16.92■□□□□ 0.3
SREBF1-217ENST00000577897 RHPN1Q8TCX5 695 aa16.92■□□□□ 0.3
SREBF1-217ENST00000577897 TBC1D32Q96NH3 1257 aa16.92■□□□□ 0.3
SREBF1-217ENST00000577897 C22orf23Q9BZE7 217 aa16.92■□□□□ 0.3
SREBF1-217ENST00000577897 PICK1Q9NRD5 415 aa16.92■□□□□ 0.3
SREBF1-217ENST00000577897 DNAH12Q6ZR08 3092 aa16.91■□□□□ 0.3
SREBF1-217ENST00000577897 ERC2O15083 957 aa16.91■□□□□ 0.3
SREBF1-217ENST00000577897 SMARCA5O60264 1052 aaPredicted RBP16.91■□□□□ 0.3
SREBF1-217ENST00000577897 MFAP1P55081 439 aaKnown RBP16.91■□□□□ 0.3
SREBF1-217ENST00000577897 NFIAQ12857 509 aa16.91■□□□□ 0.3
SREBF1-217ENST00000577897 HHIPL2Q6UWX4 724 aa16.91■□□□□ 0.3
SREBF1-217ENST00000577897 SYMPKQ92797 1274 aaKnown RBP16.91■□□□□ 0.3
SREBF1-217ENST00000577897 MRIQ9BWK5 157 aa16.91■□□□□ 0.3
SREBF1-217ENST00000577897 ZNF697Q5TEC3 545 aa16.9■□□□□ 0.3
SREBF1-217ENST00000577897 SCYL3Q8IZE3 742 aa16.9■□□□□ 0.3
SREBF1-217ENST00000577897 SUCLG2Q96I99 432 aa16.9■□□□□ 0.3
SREBF1-217ENST00000577897 BCL11AQ9H165 835 aa16.9■□□□□ 0.3
SREBF1-217ENST00000577897 SLC45A1Q9Y2W3 748 aa16.9■□□□□ 0.3
SREBF1-217ENST00000577897 PFASO15067 1338 aa16.9■□□□□ 0.3
SREBF1-217ENST00000577897 MROH5Q6ZUA9 1318 aa16.9■□□□□ 0.3
SREBF1-217ENST00000577897 TRIM75PA6NK02 468 aa16.89■□□□□ 0.29
SREBF1-217ENST00000577897 REC8O95072 547 aa16.89■□□□□ 0.29
SREBF1-217ENST00000577897 PTPRAP18433 802 aa16.89■□□□□ 0.29
SREBF1-217ENST00000577897 PLA2G5P39877 138 aa16.89■□□□□ 0.29
SREBF1-217ENST00000577897 CDC42EP5Q6NZY7 148 aa16.89■□□□□ 0.29
SREBF1-217ENST00000577897 BICC1Q9H694 974 aaKnown RBP16.89■□□□□ 0.29
SREBF1-217ENST00000577897 TTC41PQ6P2S7 1318 aa16.89■□□□□ 0.29
SREBF1-217ENST00000577897 DOCK3Q8IZD9 2030 aa16.88■□□□□ 0.29
SREBF1-217ENST00000577897 IFIT2P09913 472 aaKnown RBP16.88■□□□□ 0.29
SREBF1-217ENST00000577897 FAM110CQ1W6H9 321 aa16.88■□□□□ 0.29
SREBF1-217ENST00000577897 METTL24Q5JXM2 366 aa16.88■□□□□ 0.29
SREBF1-217ENST00000577897 MAFAQ8NHW3 353 aaPredicted RBP16.88■□□□□ 0.29
SREBF1-217ENST00000577897 OGDHLQ9ULD0 1010 aa16.88■□□□□ 0.29
SREBF1-217ENST00000577897 SUGT1Q9Y2Z0 365 aa16.88■□□□□ 0.29
SREBF1-217ENST00000577897 DAGLAQ9Y4D2 1042 aa16.88■□□□□ 0.29
SREBF1-217ENST00000577897 AFG3L2Q9Y4W6 797 aa16.88■□□□□ 0.29
SREBF1-217ENST00000577897 CDH23Q9H251 3354 aa16.88■□□□□ 0.29
SREBF1-217ENST00000577897 NCOR1O75376 2440 aa16.87■□□□□ 0.29
SREBF1-217ENST00000577897 DOCK2Q92608 1830 aa16.87■□□□□ 0.29
SREBF1-217ENST00000577897 DIXDC1Q155Q3 683 aa16.87■□□□□ 0.29
SREBF1-217ENST00000577897 TBC1D9Q6ZT07 1266 aa16.87■□□□□ 0.29
SREBF1-217ENST00000577897 CCDC84Q86UT8 332 aaPredicted RBP16.87■□□□□ 0.29
SREBF1-217ENST00000577897 ZFPM1Q8IX07 1006 aa16.87■□□□□ 0.29
SREBF1-217ENST00000577897 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.87■□□□□ 0.29
SREBF1-217ENST00000577897 FAM198AQ9UFP1 575 aa16.87■□□□□ 0.29
SREBF1-217ENST00000577897 RAPGEFL1Q9UHV5 662 aa16.87■□□□□ 0.29
SREBF1-217ENST00000577897 AGTPBP1Q9UPW5 1226 aa16.87■□□□□ 0.29
SREBF1-217ENST00000577897 PTPRFP10586 1907 aa16.86■□□□□ 0.29
SREBF1-217ENST00000577897 SEC24BO95487 1268 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms