RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 USP50Q70EL3 339 aaPredicted RBP19.48■□□□□ 0.71
ERCC4-208ENST00000576348 DHX32Q7L7V1 743 aaKnown RBP19.48■□□□□ 0.71
ERCC4-208ENST00000576348 HSCBQ8IWL3 235 aa19.48■□□□□ 0.71
ERCC4-208ENST00000576348 DYNLL2Q96FJ2 89 aa19.48■□□□□ 0.71
ERCC4-208ENST00000576348 CSRNP1Q96S65 589 aa19.48■□□□□ 0.71
ERCC4-208ENST00000576348 GGA3Q9NZ52 723 aa19.48■□□□□ 0.71
ERCC4-208ENST00000576348 DAXXQ9UER7 740 aaPredicted RBP19.48■□□□□ 0.71
ERCC4-208ENST00000576348 SERPINB13Q9UIV8 391 aa19.48■□□□□ 0.71
ERCC4-208ENST00000576348 NEDD4P46934 1319 aa19.48■□□□□ 0.71
ERCC4-208ENST00000576348 RANBP6O60518 1105 aaKnown RBP19.47■□□□□ 0.71
ERCC4-208ENST00000576348 PRDM1O75626 825 aa19.47■□□□□ 0.71
ERCC4-208ENST00000576348 RASA3Q14644 834 aa19.47■□□□□ 0.71
ERCC4-208ENST00000576348 EAPPQ56P03 285 aaPredicted RBP19.47■□□□□ 0.71
ERCC4-208ENST00000576348 ZNF444Q8N0Y2 327 aaPredicted RBP19.47■□□□□ 0.71
ERCC4-208ENST00000576348 DCPSQ96C86 337 aaKnown RBP19.47■□□□□ 0.71
ERCC4-208ENST00000576348 SWAP70Q9UH65 585 aa19.47■□□□□ 0.71
ERCC4-208ENST00000576348 ASTN2O75129 1339 aaPredicted RBP19.47■□□□□ 0.71
ERCC4-208ENST00000576348 ROBO3Q96MS0 1386 aa19.46■□□□□ 0.71
ERCC4-208ENST00000576348 PRC1O43663 620 aa19.46■□□□□ 0.71
ERCC4-208ENST00000576348 ORC4O43929 436 aa19.46■□□□□ 0.71
ERCC4-208ENST00000576348 KDM4AO75164 1064 aa19.46■□□□□ 0.71
ERCC4-208ENST00000576348 NT5C2P49902 561 aa19.46■□□□□ 0.71
ERCC4-208ENST00000576348 SART3Q15020 963 aaKnown RBP19.46■□□□□ 0.71
ERCC4-208ENST00000576348 C16orf86Q6ZW13 317 aa19.46■□□□□ 0.71
ERCC4-208ENST00000576348 PNMA8AQ86V59 439 aaPredicted RBP19.46■□□□□ 0.71
ERCC4-208ENST00000576348 TMEM39BQ9GZU3 492 aa19.46■□□□□ 0.71
ERCC4-208ENST00000576348 EHD4Q9H223 541 aa19.46■□□□□ 0.71
ERCC4-208ENST00000576348 INCENPQ9NQS7 918 aa19.46■□□□□ 0.71
ERCC4-208ENST00000576348 TAOK2Q9UL54 1235 aa19.46■□□□□ 0.71
ERCC4-208ENST00000576348 DDTLA6NHG4 134 aaPredicted RBP19.45■□□□□ 0.7
ERCC4-208ENST00000576348 TSPY2A6NKD2 308 aa19.45■□□□□ 0.7
ERCC4-208ENST00000576348 SMIM22K7EJ46 135 aa19.45■□□□□ 0.7
ERCC4-208ENST00000576348 CDK8P49336 464 aa19.45■□□□□ 0.7
ERCC4-208ENST00000576348 HIRAP54198 1017 aaPredicted RBP19.45■□□□□ 0.7
ERCC4-208ENST00000576348 EVX2Q03828 476 aa19.45■□□□□ 0.7
ERCC4-208ENST00000576348 ANKRD1Q15327 319 aa19.45■□□□□ 0.7
ERCC4-208ENST00000576348 FOXP4Q8IVH2 680 aaPredicted RBP19.45■□□□□ 0.7
ERCC4-208ENST00000576348 MB21D2Q8IYB1 491 aaPredicted RBP19.45■□□□□ 0.7
ERCC4-208ENST00000576348 UBAC1Q9BSL1 405 aa19.45■□□□□ 0.7
ERCC4-208ENST00000576348 DEFB129Q9H1M3 183 aa19.45■□□□□ 0.7
ERCC4-208ENST00000576348 TAF1DQ9H5J8 278 aaPredicted RBP19.45■□□□□ 0.7
ERCC4-208ENST00000576348 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.45■□□□□ 0.7
ERCC4-208ENST00000576348 COL2A1P02458 1487 aaPredicted RBP19.45■□□□□ 0.7
ERCC4-208ENST00000576348 CNTNAP1P78357 1384 aa19.44■□□□□ 0.7
ERCC4-208ENST00000576348 ATRNL1Q5VV63 1379 aa19.44■□□□□ 0.7
ERCC4-208ENST00000576348 NAV1Q8NEY1 1877 aa19.44■□□□□ 0.7
ERCC4-208ENST00000576348 ERICH2A1L162 156 aa19.44■□□□□ 0.7
ERCC4-208ENST00000576348 MCM2P49736 904 aa19.44■□□□□ 0.7
ERCC4-208ENST00000576348 NOL8Q76FK4 1167 aaKnown RBP19.44■□□□□ 0.7
ERCC4-208ENST00000576348 SH3BP5LQ7L8J4 393 aa19.44■□□□□ 0.7
ERCC4-208ENST00000576348 SULF1Q8IWU6 871 aa19.44■□□□□ 0.7
ERCC4-208ENST00000576348 SLC44A5Q8NCS7 719 aa19.44■□□□□ 0.7
ERCC4-208ENST00000576348 HOOK2Q96ED9 719 aa19.44■□□□□ 0.7
ERCC4-208ENST00000576348 TCEANC2Q96MN5 208 aa19.44■□□□□ 0.7
ERCC4-208ENST00000576348 CLEC11AQ9Y240 323 aa19.44■□□□□ 0.7
ERCC4-208ENST00000576348 PITPNM2Q9BZ72 1349 aa19.44■□□□□ 0.7
ERCC4-208ENST00000576348 FGRP09769 529 aa19.43■□□□□ 0.7
ERCC4-208ENST00000576348 TSPY3P0CV98 308 aa19.43■□□□□ 0.7
ERCC4-208ENST00000576348 TSPY8P0CW00 308 aa19.43■□□□□ 0.7
ERCC4-208ENST00000576348 CHST3Q7LGC8 479 aa19.43■□□□□ 0.7
ERCC4-208ENST00000576348 IQCA1Q86XH1 822 aa19.43■□□□□ 0.7
ERCC4-208ENST00000576348 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.43■□□□□ 0.7
ERCC4-208ENST00000576348 SCAF8Q9UPN6 1271 aaKnown RBP19.43■□□□□ 0.7
ERCC4-208ENST00000576348 PPP2R3BQ9Y5P8 575 aa19.43■□□□□ 0.7
ERCC4-208ENST00000576348 WDR19Q8NEZ3 1342 aa19.43■□□□□ 0.7
ERCC4-208ENST00000576348 SRCAPQ6ZRS2 3230 aa19.43■□□□□ 0.7
ERCC4-208ENST00000576348 IFIT3O14879 490 aaKnown RBP19.42■□□□□ 0.7
ERCC4-208ENST00000576348 VEGFAP15692 232 aaPredicted RBP19.42■□□□□ 0.7
ERCC4-208ENST00000576348 TFAP4Q01664 338 aa19.42■□□□□ 0.7
ERCC4-208ENST00000576348 TMEM67Q5HYA8 995 aa19.42■□□□□ 0.7
ERCC4-208ENST00000576348 Q6ZUG5 572 aa19.42■□□□□ 0.7
ERCC4-208ENST00000576348 ZNF526Q8TF50 670 aaPredicted RBP19.42■□□□□ 0.7
ERCC4-208ENST00000576348 ZC3H15Q8WU90 426 aaKnown RBP19.42■□□□□ 0.7
ERCC4-208ENST00000576348 TMEM87BQ96K49 555 aa19.42■□□□□ 0.7
ERCC4-208ENST00000576348 LRRC2Q9BYS8 371 aa19.42■□□□□ 0.7
ERCC4-208ENST00000576348 HERC5Q9UII4 1024 aaKnown RBP19.42■□□□□ 0.7
ERCC4-208ENST00000576348 TACC3Q9Y6A5 838 aa19.42■□□□□ 0.7
ERCC4-208ENST00000576348 GOLGB1Q14789 3259 aaKnown RBP19.41■□□□□ 0.7
ERCC4-208ENST00000576348 MPHOSPH10O00566 681 aaKnown RBP19.41■□□□□ 0.7
ERCC4-208ENST00000576348 AK2P54819 239 aa19.41■□□□□ 0.7
ERCC4-208ENST00000576348 EXOSC10Q01780 885 aaKnown RBP19.41■□□□□ 0.7
ERCC4-208ENST00000576348 GABPAQ06546 454 aa19.41■□□□□ 0.7
ERCC4-208ENST00000576348 FAM47AQ5JRC9 791 aa19.41■□□□□ 0.7
ERCC4-208ENST00000576348 NFXL1Q6ZNB6 911 aa19.41■□□□□ 0.7
ERCC4-208ENST00000576348 CYB5R4Q7L1T6 521 aa19.41■□□□□ 0.7
ERCC4-208ENST00000576348 SNX21Q969T3 373 aa19.41■□□□□ 0.7
ERCC4-208ENST00000576348 RRAGCQ9HB90 399 aa19.41■□□□□ 0.7
ERCC4-208ENST00000576348 ZSWIM5Q9P217 1185 aa19.41■□□□□ 0.7
ERCC4-208ENST00000576348 NAP1L2Q9ULW6 460 aaPredicted RBP19.41■□□□□ 0.7
ERCC4-208ENST00000576348 FAM196BA6NMK8 535 aa19.4■□□□□ 0.7
ERCC4-208ENST00000576348 RASA1P20936 1047 aa19.4■□□□□ 0.7
ERCC4-208ENST00000576348 CCDC178Q5BJE1 867 aa19.4■□□□□ 0.7
ERCC4-208ENST00000576348 DCAF15Q66K64 600 aa19.4■□□□□ 0.7
ERCC4-208ENST00000576348 KRT26Q7Z3Y9 468 aa19.4■□□□□ 0.7
ERCC4-208ENST00000576348 TTC14Q96N46 770 aa19.4■□□□□ 0.7
ERCC4-208ENST00000576348 SHMT1P34896 483 aa19.39■□□□□ 0.69
ERCC4-208ENST00000576348 ANTXR2P58335 489 aa19.39■□□□□ 0.69
ERCC4-208ENST00000576348 WTAPQ15007 396 aa19.39■□□□□ 0.69
ERCC4-208ENST00000576348 SUPT20HL1Q3ZLR7 823 aa19.39■□□□□ 0.69
ERCC4-208ENST00000576348 CERKLQ49MI3 558 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms