RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 AK9Q5TCS8 1911 aa9.01□□□□□ -0.97
CHD3-213ENST00000571249 A0A0G2JLL6 359 aaPredicted RBP9□□□□□ -0.97
CHD3-213ENST00000571249 MED19A0JLT2 244 aaPredicted RBP9□□□□□ -0.97
CHD3-213ENST00000571249 TLE2Q04725 743 aa9□□□□□ -0.97
CHD3-213ENST00000571249 FAM110CQ1W6H9 321 aa9□□□□□ -0.97
CHD3-213ENST00000571249 C16orf59Q7L2K0 433 aa9□□□□□ -0.97
CHD3-213ENST00000571249 PRRT2Q7Z6L0 340 aaPredicted RBP9□□□□□ -0.97
CHD3-213ENST00000571249 GJD3Q8N144 294 aa9□□□□□ -0.97
CHD3-213ENST00000571249 CNTNAP3BQ96NU0 1288 aa9□□□□□ -0.97
CHD3-213ENST00000571249 ZNF341Q9BYN7 854 aa9□□□□□ -0.97
CHD3-213ENST00000571249 CNTNAP3Q9BZ76 1288 aa9□□□□□ -0.97
CHD3-213ENST00000571249 TTF2Q9UNY4 1162 aaKnown RBP9□□□□□ -0.97
CHD3-213ENST00000571249 YBX2Q9Y2T7 364 aaKnown RBP9□□□□□ -0.97
CHD3-213ENST00000571249 ZHX2Q9Y6X8 837 aa9□□□□□ -0.97
CHD3-213ENST00000571249 PLXNB2O15031 1838 aa9□□□□□ -0.97
CHD3-213ENST00000571249 ARAP2Q8WZ64 1704 aa9□□□□□ -0.97
CHD3-213ENST00000571249 DNM1LO00429 736 aa8.99□□□□□ -0.97
CHD3-213ENST00000571249 PDE8AO60658 829 aa8.99□□□□□ -0.97
CHD3-213ENST00000571249 HSP90B1P14625 803 aaKnown RBP8.99□□□□□ -0.97
CHD3-213ENST00000571249 EIF4G2P78344 907 aaKnown RBP eCLIP8.99□□□□□ -0.97
CHD3-213ENST00000571249 FPGSQ05932 587 aa8.99□□□□□ -0.97
CHD3-213ENST00000571249 GRIK5Q16478 980 aa8.99□□□□□ -0.97
CHD3-213ENST00000571249 TREML2Q5T2D2 321 aa8.99□□□□□ -0.97
CHD3-213ENST00000571249 FASTKD5Q7L8L6 764 aaKnown RBP8.99□□□□□ -0.97
CHD3-213ENST00000571249 FERMT2Q96AC1 680 aa8.99□□□□□ -0.97
CHD3-213ENST00000571249 ZNF112Q9UJU3 913 aa8.99□□□□□ -0.97
CHD3-213ENST00000571249 SERPINA10Q9UK55 444 aa8.99□□□□□ -0.97
CHD3-213ENST00000571249 NUDCQ9Y266 331 aa8.99□□□□□ -0.97
CHD3-213ENST00000571249 MAP1BP46821 2468 aaKnown RBP8.99□□□□□ -0.97
CHD3-213ENST00000571249 SPTBN2O15020 2390 aa8.99□□□□□ -0.97
CHD3-213ENST00000571249 GPR179Q6PRD1 2367 aa8.99□□□□□ -0.97
CHD3-213ENST00000571249 ALADP13716 330 aa8.98□□□□□ -0.97
CHD3-213ENST00000571249 RAG1P15918 1043 aa8.98□□□□□ -0.97
CHD3-213ENST00000571249 ZKSCAN1P17029 563 aaPredicted RBP8.98□□□□□ -0.97
CHD3-213ENST00000571249 CRKP46108 304 aa8.98□□□□□ -0.97
CHD3-213ENST00000571249 TCF15Q12870 199 aa8.98□□□□□ -0.97
CHD3-213ENST00000571249 TRIM28Q13263 835 aaKnown RBP8.98□□□□□ -0.97
CHD3-213ENST00000571249 SNX17Q15036 470 aa8.98□□□□□ -0.97
CHD3-213ENST00000571249 DCAF15Q66K64 600 aa8.98□□□□□ -0.97
CHD3-213ENST00000571249 HLA-CQ95604 372 aa8.98□□□□□ -0.97
CHD3-213ENST00000571249 CDC5LQ99459 802 aaKnown RBP8.98□□□□□ -0.97
CHD3-213ENST00000571249 GREM2Q9H772 168 aa8.98□□□□□ -0.97
CHD3-213ENST00000571249 TSPYL4Q9UJ04 414 aa8.98□□□□□ -0.97
CHD3-213ENST00000571249 COG5Q9UP83 839 aa8.98□□□□□ -0.97
CHD3-213ENST00000571249 SLC45A1Q9Y2W3 748 aa8.98□□□□□ -0.97
CHD3-213ENST00000571249 MTCH2Q9Y6C9 303 aa8.98□□□□□ -0.97
CHD3-213ENST00000571249 FLNBO75369 2602 aaKnown RBP8.98□□□□□ -0.97
CHD3-213ENST00000571249 XRCC5P13010 732 aaKnown RBP8.97□□□□□ -0.97
CHD3-213ENST00000571249 IL1R1P14778 569 aa8.97□□□□□ -0.97
CHD3-213ENST00000571249 MYOGP15173 224 aa8.97□□□□□ -0.97
CHD3-213ENST00000571249 SSTR3P32745 418 aaPredicted RBP8.97□□□□□ -0.97
CHD3-213ENST00000571249 ID4P47928 161 aa8.97□□□□□ -0.97
CHD3-213ENST00000571249 NUBP1P53384 320 aa8.97□□□□□ -0.97
CHD3-213ENST00000571249 FKBP1AP62942 108 aaKnown RBP8.97□□□□□ -0.97
CHD3-213ENST00000571249 RASIP1Q5U651 963 aa8.97□□□□□ -0.97
CHD3-213ENST00000571249 FAM178BQ8IXR5 827 aa8.97□□□□□ -0.97
CHD3-213ENST00000571249 LPAR1Q92633 364 aa8.97□□□□□ -0.97
CHD3-213ENST00000571249 NUDT12Q9BQG2 462 aa8.97□□□□□ -0.97
CHD3-213ENST00000571249 SLC28A3Q9HAS3 691 aa8.97□□□□□ -0.97
CHD3-213ENST00000571249 SLC24A3Q9HC58 644 aa8.97□□□□□ -0.97
CHD3-213ENST00000571249 CHPF2Q9P2E5 772 aa8.97□□□□□ -0.97
CHD3-213ENST00000571249 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.97□□□□□ -0.97
CHD3-213ENST00000571249 MSRAQ9UJ68 235 aa8.97□□□□□ -0.97
CHD3-213ENST00000571249 AFG3L2Q9Y4W6 797 aa8.97□□□□□ -0.97
CHD3-213ENST00000571249 RLFQ13129 1914 aa8.97□□□□□ -0.97
CHD3-213ENST00000571249 RPAP1Q9BWH6 1393 aaPredicted RBP8.97□□□□□ -0.97
CHD3-213ENST00000571249 POTEB3A0JP26 581 aa8.96□□□□□ -0.98
CHD3-213ENST00000571249 TRIM75PA6NK02 468 aa8.96□□□□□ -0.98
CHD3-213ENST00000571249 TAF5LO75529 589 aa8.96□□□□□ -0.98
CHD3-213ENST00000571249 CNGA1P29973 690 aa8.96□□□□□ -0.98
CHD3-213ENST00000571249 ADCYAP1R1P41586 468 aa8.96□□□□□ -0.98
CHD3-213ENST00000571249 KCNJ4P48050 445 aa8.96□□□□□ -0.98
CHD3-213ENST00000571249 RABGGTBP53611 331 aa8.96□□□□□ -0.98
CHD3-213ENST00000571249 PTPN5P54829 565 aa8.96□□□□□ -0.98
CHD3-213ENST00000571249 MFSD14BQ5SR56 506 aa8.96□□□□□ -0.98
CHD3-213ENST00000571249 TMEM240Q5SV17 173 aa8.96□□□□□ -0.98
CHD3-213ENST00000571249 NOL9Q5SY16 702 aaKnown RBP8.96□□□□□ -0.98
CHD3-213ENST00000571249 ANO1Q5XXA6 986 aa8.96□□□□□ -0.98
CHD3-213ENST00000571249 POTEBQ6S5H4 581 aa8.96□□□□□ -0.98
CHD3-213ENST00000571249 CCDC84Q86UT8 332 aaPredicted RBP8.96□□□□□ -0.98
CHD3-213ENST00000571249 USP6NLQ92738 828 aa8.96□□□□□ -0.98
CHD3-213ENST00000571249 CFAP53Q96M91 514 aa8.96□□□□□ -0.98
CHD3-213ENST00000571249 ZMYND15Q9H091 742 aa8.96□□□□□ -0.98
CHD3-213ENST00000571249 FLRT1Q9NZU1 646 aa8.96□□□□□ -0.98
CHD3-213ENST00000571249 DDX20Q9UHI6 824 aaKnown RBP8.96□□□□□ -0.98
CHD3-213ENST00000571249 TACC3Q9Y6A5 838 aa8.96□□□□□ -0.98
CHD3-213ENST00000571249 USP24Q9UPU5 2620 aa8.95□□□□□ -0.98
CHD3-213ENST00000571249 ZNF292O60281 2723 aa8.95□□□□□ -0.98
CHD3-213ENST00000571249 SOWAHBA6NEL2 793 aa8.95□□□□□ -0.98
CHD3-213ENST00000571249 EPOPA6NHQ4 379 aa8.95□□□□□ -0.98
CHD3-213ENST00000571249 KIAA0355O15063 1070 aa8.95□□□□□ -0.98
CHD3-213ENST00000571249 DCXO43602 365 aa8.95□□□□□ -0.98
CHD3-213ENST00000571249 CLTBP09497 229 aa8.95□□□□□ -0.98
CHD3-213ENST00000571249 SLURP2P0DP57 97 aa8.95□□□□□ -0.98
CHD3-213ENST00000571249 ACRP10323 421 aa8.95□□□□□ -0.98
CHD3-213ENST00000571249 HSPA5P11021 654 aaKnown RBP8.95□□□□□ -0.98
CHD3-213ENST00000571249 PTPRAP18433 802 aa8.95□□□□□ -0.98
CHD3-213ENST00000571249 KRT24Q2M2I5 525 aa8.95□□□□□ -0.98
CHD3-213ENST00000571249 TRPV1Q8NER1 839 aa8.95□□□□□ -0.98
CHD3-213ENST00000571249 TTLL11Q8NHH1 800 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms