RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	APP	P05067	770 aa		13.86	□□□□□ -0.19
ATP2A3-208	ENST00000570845	SLURP2	P0DP57	97 aa		13.86	□□□□□ -0.19
ATP2A3-208	ENST00000570845	ZNF157	P51786	506 aa	Predicted RBP	13.86	□□□□□ -0.19
ATP2A3-208	ENST00000570845	GRM1	Q13255	1194 aa		13.86	□□□□□ -0.19
ATP2A3-208	ENST00000570845	BMP2KL	Q5H9B9	411 aa		13.86	□□□□□ -0.19
ATP2A3-208	ENST00000570845	CYP4F22	Q6NT55	531 aa		13.86	□□□□□ -0.19
ATP2A3-208	ENST00000570845	TTC6	Q86TZ1	520 aa		13.86	□□□□□ -0.19
ATP2A3-208	ENST00000570845	ANKRD13A	Q8IZ07	590 aa		13.86	□□□□□ -0.19
ATP2A3-208	ENST00000570845	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.86	□□□□□ -0.19
ATP2A3-208	ENST00000570845	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
ATP2A3-208	ENST00000570845	CLMN	Q96JQ2	1002 aa		13.86	□□□□□ -0.19
ATP2A3-208	ENST00000570845	TRIM34	Q9BYJ4	488 aa		13.86	□□□□□ -0.19
ATP2A3-208	ENST00000570845	HERC5	Q9UII4	1024 aa	Known RBP	13.86	□□□□□ -0.19
ATP2A3-208	ENST00000570845	PARP14	Q460N5	1801 aa		13.85	□□□□□ -0.19
ATP2A3-208	ENST00000570845	PATL2	C9JE40	543 aa	Known RBP	13.85	□□□□□ -0.19
ATP2A3-208	ENST00000570845	TBC1D12	O60347	775 aa		13.85	□□□□□ -0.19
ATP2A3-208	ENST00000570845	TDO2	P48775	406 aa		13.85	□□□□□ -0.19
ATP2A3-208	ENST00000570845	MAP3K9	P80192	1104 aa		13.85	□□□□□ -0.19
ATP2A3-208	ENST00000570845	MAP3K10	Q02779	954 aa		13.85	□□□□□ -0.19
ATP2A3-208	ENST00000570845	AMOTL1	Q8IY63	956 aa		13.85	□□□□□ -0.19
ATP2A3-208	ENST00000570845	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.85	□□□□□ -0.19
ATP2A3-208	ENST00000570845	CAPNS2	Q96L46	248 aa		13.85	□□□□□ -0.19
ATP2A3-208	ENST00000570845	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.85	□□□□□ -0.19
ATP2A3-208	ENST00000570845	CSAD	Q9Y600	493 aa		13.85	□□□□□ -0.19
ATP2A3-208	ENST00000570845	CCDC171	Q6TFL3	1326 aa		13.85	□□□□□ -0.19
ATP2A3-208	ENST00000570845	UNCX	A6NJT0	531 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	PHF20L1	A8MW92	1017 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	USP17L12	C9JPN9	530 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	USP17L21	D6R901	530 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	CYP2D6	P10635	497 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	CHML	P26374	656 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	INPP5B	P32019	993 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	ECE1	P42892	770 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	VEGFB	P49765	207 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	PLCD1	P51178	756 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	MFAP1	P55081	439 aa	Known RBP	13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	EVX2	Q03828	476 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	VGLL4	Q14135	290 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	GIMAP6	Q6P9H5	292 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	SLC10A4	Q96EP9	437 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	NACAP1	Q9BZK3	213 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	EHD4	Q9H223	541 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	ELP3	Q9H9T3	547 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	SERPINB13	Q9UIV8	391 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	ZNF112	Q9UJU3	913 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	WDR33	Q9C0J8	1336 aa	Known RBP	13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	MYH6	P13533	1939 aa		13.84	□□□□□ -0.19
ATP2A3-208	ENST00000570845	CYP2D7	A0A087X1C5	515 aa		13.83	□□□□□ -0.2
ATP2A3-208	ENST00000570845	SLC10A3	P09131	477 aa		13.83	□□□□□ -0.2
ATP2A3-208	ENST00000570845	VPS53	Q5VIR6	699 aa		13.83	□□□□□ -0.2
ATP2A3-208	ENST00000570845	CTR9	Q6PD62	1173 aa		13.83	□□□□□ -0.2
ATP2A3-208	ENST00000570845	METTL16	Q86W50	562 aa	Known RBP	13.83	□□□□□ -0.2
ATP2A3-208	ENST00000570845	RASAL3	Q86YV0	1011 aa		13.83	□□□□□ -0.2
ATP2A3-208	ENST00000570845	IFNL3	Q8IZI9	196 aa		13.83	□□□□□ -0.2
ATP2A3-208	ENST00000570845	DNAJC5G	Q8N7S2	189 aa		13.83	□□□□□ -0.2
ATP2A3-208	ENST00000570845	RUFY2	Q8WXA3	655 aa		13.83	□□□□□ -0.2
ATP2A3-208	ENST00000570845	CCDC102A	Q96A19	550 aa		13.83	□□□□□ -0.2
ATP2A3-208	ENST00000570845	NAPB	Q9H115	298 aa		13.83	□□□□□ -0.2
ATP2A3-208	ENST00000570845	DNAJC18	Q9H819	358 aa		13.83	□□□□□ -0.2
ATP2A3-208	ENST00000570845	SNCAIP	Q9Y6H5	919 aa		13.83	□□□□□ -0.2
ATP2A3-208	ENST00000570845	MGAM	O43451	1857 aa		13.82	□□□□□ -0.2
ATP2A3-208	ENST00000570845	FAM155A	B1AL88	458 aa	Predicted RBP	13.82	□□□□□ -0.2
ATP2A3-208	ENST00000570845	FOXP2	O15409	715 aa		13.82	□□□□□ -0.2
ATP2A3-208	ENST00000570845	SBK1	Q52WX2	424 aa		13.82	□□□□□ -0.2
ATP2A3-208	ENST00000570845	C12orf60	Q5U649	245 aa		13.82	□□□□□ -0.2
ATP2A3-208	ENST00000570845	COL11A1	P12107	1806 aa	Predicted RBP	13.82	□□□□□ -0.2
ATP2A3-208	ENST00000570845	RAD50	Q92878	1312 aa		13.82	□□□□□ -0.2
ATP2A3-208	ENST00000570845	CASP8AP2	Q9UKL3	1982 aa		13.82	□□□□□ -0.2
ATP2A3-208	ENST00000570845	MINDY4B	A8MYZ0	360 aa		13.81	□□□□□ -0.2
ATP2A3-208	ENST00000570845	SMIM22	K7EJ46	135 aa		13.81	□□□□□ -0.2
ATP2A3-208	ENST00000570845	CTNND1	O60716	968 aa	Known RBP	13.81	□□□□□ -0.2
ATP2A3-208	ENST00000570845	AOC2	O75106	756 aa		13.81	□□□□□ -0.2
ATP2A3-208	ENST00000570845	HSPD1	P10809	573 aa	Known RBP	13.81	□□□□□ -0.2
ATP2A3-208	ENST00000570845	MKRN3	Q13064	507 aa	Known RBP	13.81	□□□□□ -0.2
ATP2A3-208	ENST00000570845	NOL9	Q5SY16	702 aa	Known RBP	13.81	□□□□□ -0.2
ATP2A3-208	ENST00000570845	SCYL3	Q8IZE3	742 aa		13.81	□□□□□ -0.2
ATP2A3-208	ENST00000570845	DYNLL2	Q96FJ2	89 aa		13.81	□□□□□ -0.2
ATP2A3-208	ENST00000570845	WNK4	Q96J92	1243 aa		13.81	□□□□□ -0.2
ATP2A3-208	ENST00000570845	IL25	Q9H293	177 aa		13.81	□□□□□ -0.2
ATP2A3-208	ENST00000570845	ROBO3	Q96MS0	1386 aa		13.81	□□□□□ -0.2
ATP2A3-208	ENST00000570845	GDF11	O95390	407 aa		13.8	□□□□□ -0.2
ATP2A3-208	ENST00000570845	SHMT1	P34896	483 aa		13.8	□□□□□ -0.2
ATP2A3-208	ENST00000570845	CAP2	P40123	477 aa		13.8	□□□□□ -0.2
ATP2A3-208	ENST00000570845	GABPA	Q06546	454 aa		13.8	□□□□□ -0.2
ATP2A3-208	ENST00000570845	NOG	Q13253	232 aa		13.8	□□□□□ -0.2
ATP2A3-208	ENST00000570845	RRP1B	Q14684	758 aa	Known RBP	13.8	□□□□□ -0.2
ATP2A3-208	ENST00000570845	SPRYD7	Q5W111	196 aa		13.8	□□□□□ -0.2
ATP2A3-208	ENST00000570845	CNKSR2	Q8WXI2	1034 aa		13.8	□□□□□ -0.2
ATP2A3-208	ENST00000570845	OPTN	Q96CV9	577 aa		13.8	□□□□□ -0.2
ATP2A3-208	ENST00000570845	OTUD5	Q96G74	571 aa		13.8	□□□□□ -0.2
ATP2A3-208	ENST00000570845	SWAP70	Q9UH65	585 aa		13.8	□□□□□ -0.2
ATP2A3-208	ENST00000570845	SPDYE5	A6NIY4	337 aa		13.79	□□□□□ -0.2
ATP2A3-208	ENST00000570845	CDC45	O75419	566 aa		13.79	□□□□□ -0.2
ATP2A3-208	ENST00000570845	ZBTB48	P10074	688 aa	Predicted RBP	13.79	□□□□□ -0.2
ATP2A3-208	ENST00000570845	GJA5	P36382	358 aa		13.79	□□□□□ -0.2
ATP2A3-208	ENST00000570845	ALX1	Q15699	326 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms