RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 PPP4CP60510 307 aa18.42■□□□□ 0.54
RAB40B-203ENST00000570676 HSP90AB4PQ58FF6 505 aa18.42■□□□□ 0.54
RAB40B-203ENST00000570676 CCDC136Q96JN2 1154 aa18.42■□□□□ 0.54
RAB40B-203ENST00000570676 PICK1Q9NRD5 415 aa18.42■□□□□ 0.54
RAB40B-203ENST00000570676 FLT1P17948 1338 aa18.42■□□□□ 0.54
RAB40B-203ENST00000570676 MYH7P12883 1935 aa18.41■□□□□ 0.54
RAB40B-203ENST00000570676 A0A0G2JLL6 359 aaPredicted RBP18.41■□□□□ 0.54
RAB40B-203ENST00000570676 PDHXO00330 501 aa18.41■□□□□ 0.54
RAB40B-203ENST00000570676 BAG3O95817 575 aa18.41■□□□□ 0.54
RAB40B-203ENST00000570676 GPAT2Q6NUI2 795 aa18.41■□□□□ 0.54
RAB40B-203ENST00000570676 PRRT2Q7Z6L0 340 aaPredicted RBP18.41■□□□□ 0.54
RAB40B-203ENST00000570676 CCDC84Q86UT8 332 aaPredicted RBP18.41■□□□□ 0.54
RAB40B-203ENST00000570676 NOL10Q9BSC4 688 aaKnown RBP18.41■□□□□ 0.54
RAB40B-203ENST00000570676 ANTXR1Q9H6X2 564 aa18.41■□□□□ 0.54
RAB40B-203ENST00000570676 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.41■□□□□ 0.548e-8■■■■■ 28.7
RAB40B-203ENST00000570676 AFG3L2Q9Y4W6 797 aa18.41■□□□□ 0.54
RAB40B-203ENST00000570676 ZHX2Q9Y6X8 837 aa18.41■□□□□ 0.54
RAB40B-203ENST00000570676 HMMRO75330 724 aa18.4■□□□□ 0.54
RAB40B-203ENST00000570676 PLCG2P16885 1265 aa18.4■□□□□ 0.54
RAB40B-203ENST00000570676 LACTBP83111 547 aaPredicted RBP18.4■□□□□ 0.54
RAB40B-203ENST00000570676 RRP1BQ14684 758 aaKnown RBP18.4■□□□□ 0.54
RAB40B-203ENST00000570676 C17orf99Q6UX52 265 aa18.4■□□□□ 0.54
RAB40B-203ENST00000570676 KIF1BPQ96EK5 621 aa18.4■□□□□ 0.54
RAB40B-203ENST00000570676 ARHGAP39Q9C0H5 1083 aa18.4■□□□□ 0.54
RAB40B-203ENST00000570676 DNAJC18Q9H819 358 aa18.4■□□□□ 0.54
RAB40B-203ENST00000570676 IDH1O75874 414 aaKnown RBP18.39■□□□□ 0.53
RAB40B-203ENST00000570676 DYNLL1P63167 89 aaKnown RBP18.39■□□□□ 0.53
RAB40B-203ENST00000570676 HDAC1Q13547 482 aaPredicted RBP18.39■□□□□ 0.53
RAB40B-203ENST00000570676 B4GALNT3Q6L9W6 998 aa18.39■□□□□ 0.53
RAB40B-203ENST00000570676 MAPKAPK5Q8IW41 473 aa18.39■□□□□ 0.53
RAB40B-203ENST00000570676 TGFBRAP1Q8WUH2 860 aa18.39■□□□□ 0.53
RAB40B-203ENST00000570676 RWDD1Q9H446 243 aaPredicted RBP18.39■□□□□ 0.53
RAB40B-203ENST00000570676 HTTP42858 3142 aa18.39■□□□□ 0.53
RAB40B-203ENST00000570676 CYP7A1P22680 504 aa18.38■□□□□ 0.53
RAB40B-203ENST00000570676 CTGFP29279 349 aa18.38■□□□□ 0.53
RAB40B-203ENST00000570676 ARMC5Q96C12 935 aa18.38■□□□□ 0.53
RAB40B-203ENST00000570676 DHX36Q9H2U1 1008 aaKnown RBP18.38■□□□□ 0.53
RAB40B-203ENST00000570676 CPA4Q9UI42 421 aa18.38■□□□□ 0.53
RAB40B-203ENST00000570676 HERC5Q9UII4 1024 aaKnown RBP18.38■□□□□ 0.53
RAB40B-203ENST00000570676 APBB1O00213 710 aa18.37■□□□□ 0.53
RAB40B-203ENST00000570676 IGHDP01880 384 aa18.37■□□□□ 0.53
RAB40B-203ENST00000570676 CAP2P40123 477 aa18.37■□□□□ 0.53
RAB40B-203ENST00000570676 CLASRPQ8N2M8 674 aaKnown RBP18.37■□□□□ 0.53
RAB40B-203ENST00000570676 MAGEB6Q8N7X4 407 aa18.37■□□□□ 0.53
RAB40B-203ENST00000570676 PARK7Q99497 189 aaKnown RBP18.37■□□□□ 0.53
RAB40B-203ENST00000570676 PTCH2Q9Y6C5 1203 aa18.37■□□□□ 0.53
RAB40B-203ENST00000570676 TRIM75PA6NK02 468 aa18.36■□□□□ 0.53
RAB40B-203ENST00000570676 RAB11FIP3O75154 756 aa18.36■□□□□ 0.53
RAB40B-203ENST00000570676 CYP2C8P10632 490 aa18.36■□□□□ 0.53
RAB40B-203ENST00000570676 BCRP11274 1271 aa18.36■□□□□ 0.53
RAB40B-203ENST00000570676 GADL1Q6ZQY3 521 aa18.36■□□□□ 0.53
RAB40B-203ENST00000570676 FASTKD5Q7L8L6 764 aaKnown RBP18.36■□□□□ 0.53
RAB40B-203ENST00000570676 METTL16Q86W50 562 aaKnown RBP18.36■□□□□ 0.53
RAB40B-203ENST00000570676 MIGA1Q8NAN2 632 aa18.36■□□□□ 0.53
RAB40B-203ENST00000570676 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.36■□□□□ 0.53
RAB40B-203ENST00000570676 PI4KBQ9UBF8 816 aa18.36■□□□□ 0.53
RAB40B-203ENST00000570676 ARHGEF6Q15052 776 aa18.35■□□□□ 0.53
RAB40B-203ENST00000570676 TMED8Q6PL24 325 aaPredicted RBP18.35■□□□□ 0.53
RAB40B-203ENST00000570676 PALD1Q9ULE6 856 aa18.35■□□□□ 0.53
RAB40B-203ENST00000570676 SLC45A1Q9Y2W3 748 aa18.35■□□□□ 0.53
RAB40B-203ENST00000570676 MAP3K12Q12852 859 aa18.34■□□□□ 0.53
RAB40B-203ENST00000570676 KIF22Q14807 665 aa18.34■□□□□ 0.53
RAB40B-203ENST00000570676 CERS3Q8IU89 383 aa18.34■□□□□ 0.53
RAB40B-203ENST00000570676 RIOK1Q9BRS2 568 aaKnown RBP18.34■□□□□ 0.53
RAB40B-203ENST00000570676 GNRH1P01148 92 aa18.33■□□□□ 0.52
RAB40B-203ENST00000570676 IFIT2P09913 472 aaKnown RBP18.33■□□□□ 0.52
RAB40B-203ENST00000570676 JAG1P78504 1218 aa18.33■□□□□ 0.52
RAB40B-203ENST00000570676 TTF1Q15361 905 aaPredicted RBP18.33■□□□□ 0.52
RAB40B-203ENST00000570676 SHROOM1Q2M3G4 852 aaPredicted RBP18.33■□□□□ 0.52
RAB40B-203ENST00000570676 TREML2Q5T2D2 321 aa18.33■□□□□ 0.52
RAB40B-203ENST00000570676 PROCA1Q8NCQ7 364 aaPredicted RBP18.33■□□□□ 0.52
RAB40B-203ENST00000570676 ZNF333Q96JL9 665 aa18.33■□□□□ 0.52
RAB40B-203ENST00000570676 TRIM47Q96LD4 638 aa18.33■□□□□ 0.52
RAB40B-203ENST00000570676 TBC1D2Q9BYX2 928 aa18.33■□□□□ 0.52
RAB40B-203ENST00000570676 SAP30BPQ9UHR5 308 aaKnown RBP18.33■□□□□ 0.52
RAB40B-203ENST00000570676 AGTPBP1Q9UPW5 1226 aa18.33■□□□□ 0.52
RAB40B-203ENST00000570676 MYH8P13535 1937 aa18.33■□□□□ 0.52
RAB40B-203ENST00000570676 PDE4DIPQ5VU43 2346 aa18.32■□□□□ 0.52
RAB40B-203ENST00000570676 POTEFA5A3E0 1075 aa18.32■□□□□ 0.52
RAB40B-203ENST00000570676 ECM2O94769 699 aaPredicted RBP18.32■□□□□ 0.52
RAB40B-203ENST00000570676 PDE6AP16499 860 aa18.32■□□□□ 0.52
RAB40B-203ENST00000570676 SPP2Q13103 211 aa18.32■□□□□ 0.52
RAB40B-203ENST00000570676 SLC4A8Q2Y0W8 1093 aa18.32■□□□□ 0.52
RAB40B-203ENST00000570676 CENPQQ7L2Z9 268 aaPredicted RBP18.32■□□□□ 0.52
RAB40B-203ENST00000570676 ZNF280CQ8ND82 737 aa18.32■□□□□ 0.52
RAB40B-203ENST00000570676 DNAJC2Q99543 621 aaKnown RBP18.32■□□□□ 0.52
RAB40B-203ENST00000570676 DCTPP1Q9H773 170 aa18.32■□□□□ 0.52
RAB40B-203ENST00000570676 KIAA0100Q14667 2235 aaKnown RBP18.31■□□□□ 0.52
RAB40B-203ENST00000570676 BAZ2AQ9UIF9 1905 aaKnown RBP18.31■□□□□ 0.52
RAB40B-203ENST00000570676 TNRC18O15417 2968 aaPredicted RBP18.31■□□□□ 0.52
RAB40B-203ENST00000570676 USP17L5A8MUK1 530 aa18.31■□□□□ 0.52
RAB40B-203ENST00000570676 GOLIM4O00461 696 aa18.31■□□□□ 0.52
RAB40B-203ENST00000570676 HLA-DOAP06340 250 aa18.31■□□□□ 0.52
RAB40B-203ENST00000570676 PSMC4P43686 418 aa18.31■□□□□ 0.52
RAB40B-203ENST00000570676 SLC9C1Q4G0N8 1177 aa18.31■□□□□ 0.52
RAB40B-203ENST00000570676 FOXP4Q8IVH2 680 aaPredicted RBP18.31■□□□□ 0.52
RAB40B-203ENST00000570676 GCC1Q96CN9 775 aa18.31■□□□□ 0.52
RAB40B-203ENST00000570676 EDC3Q96F86 508 aaKnown RBP18.31■□□□□ 0.52
RAB40B-203ENST00000570676 TCRBV5S4A2TA0A5A2 114 aa18.3■□□□□ 0.52
RAB40B-203ENST00000570676 GDF11O95390 407 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms