RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 SPP2Q13103 211 aa13.11□□□□□ -0.31
CTDNEP1-202ENST00000570380 SLC4A10Q6U841 1118 aa13.11□□□□□ -0.31
CTDNEP1-202ENST00000570380 ANKRD44Q8N8A2 993 aa13.11□□□□□ -0.31
CTDNEP1-202ENST00000570380 MYLIPQ8WY64 445 aa13.11□□□□□ -0.31
CTDNEP1-202ENST00000570380 LBHD1Q9BQE6 289 aaPredicted RBP13.11□□□□□ -0.31
CTDNEP1-202ENST00000570380 SRCIN1Q9C0H9 1055 aa13.11□□□□□ -0.31
CTDNEP1-202ENST00000570380 ASCC2Q9H1I8 757 aaPredicted RBP13.11□□□□□ -0.31
CTDNEP1-202ENST00000570380 MORF4L1Q9UBU8 362 aa13.11□□□□□ -0.31
CTDNEP1-202ENST00000570380 RLFQ13129 1914 aa13.11□□□□□ -0.31
CTDNEP1-202ENST00000570380 UTYO14607 1347 aa13.11□□□□□ -0.31
CTDNEP1-202ENST00000570380 XRCC5P13010 732 aaKnown RBP13.1□□□□□ -0.31
CTDNEP1-202ENST00000570380 CCND3P30281 292 aaPredicted RBP13.1□□□□□ -0.31
CTDNEP1-202ENST00000570380 EXOSC9Q06265 439 aaKnown RBP13.1□□□□□ -0.31
CTDNEP1-202ENST00000570380 SYMPKQ92797 1274 aaKnown RBP13.1□□□□□ -0.31
CTDNEP1-202ENST00000570380 PRKRIP1Q9H875 184 aaPredicted RBP13.1□□□□□ -0.31
CTDNEP1-202ENST00000570380 DDX4Q9NQI0 724 aaKnown RBP13.1□□□□□ -0.31
CTDNEP1-202ENST00000570380 PEX10O60683 326 aa13.09□□□□□ -0.31
CTDNEP1-202ENST00000570380 SLC5A1P13866 664 aa13.09□□□□□ -0.31
CTDNEP1-202ENST00000570380 HMGCS2P54868 508 aa13.09□□□□□ -0.31
CTDNEP1-202ENST00000570380 SHHQ15465 462 aa13.09□□□□□ -0.31
CTDNEP1-202ENST00000570380 LPIN2Q92539 896 aa13.09□□□□□ -0.31
CTDNEP1-202ENST00000570380 NUDT12Q9BQG2 462 aa13.09□□□□□ -0.31
CTDNEP1-202ENST00000570380 TTYH1Q9H313 450 aaPredicted RBP13.09□□□□□ -0.31
CTDNEP1-202ENST00000570380 RAPGEFL1Q9UHV5 662 aa13.09□□□□□ -0.31
CTDNEP1-202ENST00000570380 GAKO14976 1311 aa13.09□□□□□ -0.31
CTDNEP1-202ENST00000570380 SALL1Q9NSC2 1324 aa13.09□□□□□ -0.31
CTDNEP1-202ENST00000570380 FAM196BA6NMK8 535 aa13.08□□□□□ -0.32
CTDNEP1-202ENST00000570380 TBC1D12O60347 775 aa13.08□□□□□ -0.32
CTDNEP1-202ENST00000570380 PABPC4Q13310 644 aaKnown RBP eCLIP13.08□□□□□ -0.32
CTDNEP1-202ENST00000570380 CCL14Q16627 93 aa13.08□□□□□ -0.32
CTDNEP1-202ENST00000570380 ZNF280CQ8ND82 737 aa13.08□□□□□ -0.32
CTDNEP1-202ENST00000570380 SENP6Q9GZR1 1112 aaPredicted RBP13.08□□□□□ -0.32
CTDNEP1-202ENST00000570380 ZKSCAN1P17029 563 aaPredicted RBP13.07□□□□□ -0.32
CTDNEP1-202ENST00000570380 PICALMQ13492 652 aa13.07□□□□□ -0.32
CTDNEP1-202ENST00000570380 C9orf50Q5SZB4 431 aa13.07□□□□□ -0.32
CTDNEP1-202ENST00000570380 TRMT44Q8IYL2 757 aaKnown RBP13.07□□□□□ -0.32
CTDNEP1-202ENST00000570380 SOCS4Q8WXH5 440 aa13.07□□□□□ -0.32
CTDNEP1-202ENST00000570380 USP6NLQ92738 828 aa13.07□□□□□ -0.32
CTDNEP1-202ENST00000570380 TXNRD2Q9NNW7 524 aa13.07□□□□□ -0.32
CTDNEP1-202ENST00000570380 EYA2O00167 538 aa13.06□□□□□ -0.32
CTDNEP1-202ENST00000570380 TNFRSF10AO00220 468 aa13.06□□□□□ -0.32
CTDNEP1-202ENST00000570380 FOSL2P15408 326 aa13.06□□□□□ -0.32
CTDNEP1-202ENST00000570380 ATN1P54259 1190 aaPredicted RBP13.06□□□□□ -0.32
CTDNEP1-202ENST00000570380 RRP1BQ14684 758 aaKnown RBP13.06□□□□□ -0.32
CTDNEP1-202ENST00000570380 SH3D19Q5HYK7 790 aa13.06□□□□□ -0.32
CTDNEP1-202ENST00000570380 P2RX7Q99572 595 aaKnown RBP13.06□□□□□ -0.32
CTDNEP1-202ENST00000570380 OSBPL5Q9H0X9 879 aaPredicted RBP13.06□□□□□ -0.32
CTDNEP1-202ENST00000570380 SIPA1L1O43166 1804 aa13.05□□□□□ -0.32
CTDNEP1-202ENST00000570380 RFX5P48382 616 aaPredicted RBP13.05□□□□□ -0.32
CTDNEP1-202ENST00000570380 Q3C1V9 767 aa13.05□□□□□ -0.32
CTDNEP1-202ENST00000570380 MORN1Q5T089 497 aa13.05□□□□□ -0.32
CTDNEP1-202ENST00000570380 GPRC5AQ8NFJ5 357 aa13.05□□□□□ -0.32
CTDNEP1-202ENST00000570380 TBC1D2Q9BYX2 928 aa13.05□□□□□ -0.32
CTDNEP1-202ENST00000570380 PORCNQ9H237 461 aa13.05□□□□□ -0.32
CTDNEP1-202ENST00000570380 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.05□□□□□ -0.32
CTDNEP1-202ENST00000570380 RBPJLQ9UBG7 517 aa13.05□□□□□ -0.32
CTDNEP1-202ENST00000570380 DENND2AQ9ULE3 1009 aa13.05□□□□□ -0.32
CTDNEP1-202ENST00000570380 USP17L5A8MUK1 530 aa13.04□□□□□ -0.32
CTDNEP1-202ENST00000570380 HOXA7P31268 230 aaPredicted RBP13.04□□□□□ -0.32
CTDNEP1-202ENST00000570380 CAP2P40123 477 aa13.04□□□□□ -0.32
CTDNEP1-202ENST00000570380 RGS2P41220 211 aa13.04□□□□□ -0.32
CTDNEP1-202ENST00000570380 BTDP43251 543 aa13.04□□□□□ -0.32
CTDNEP1-202ENST00000570380 PHKA1P46020 1223 aa13.04□□□□□ -0.32
CTDNEP1-202ENST00000570380 RHBDL3P58872 404 aa13.04□□□□□ -0.32
CTDNEP1-202ENST00000570380 RTP1P59025 263 aa13.04□□□□□ -0.32
CTDNEP1-202ENST00000570380 HERVK_113P62684 666 aa13.04□□□□□ -0.32
CTDNEP1-202ENST00000570380 IRX3P78415 501 aaPredicted RBP13.04□□□□□ -0.32
CTDNEP1-202ENST00000570380 SMAD3P84022 425 aaKnown RBP13.04□□□□□ -0.32
CTDNEP1-202ENST00000570380 PDE3AQ14432 1141 aa13.04□□□□□ -0.32
CTDNEP1-202ENST00000570380 TJAP1Q5JTD0 557 aa13.04□□□□□ -0.32
CTDNEP1-202ENST00000570380 ATG9AQ7Z3C6 839 aa13.04□□□□□ -0.32
CTDNEP1-202ENST00000570380 GPR142Q7Z601 462 aa13.04□□□□□ -0.32
CTDNEP1-202ENST00000570380 FAM163AQ96GL9 167 aaPredicted RBP13.04□□□□□ -0.32
CTDNEP1-202ENST00000570380 GNL3LQ9NVN8 582 aaKnown RBP13.04□□□□□ -0.32
CTDNEP1-202ENST00000570380 PRKAG2Q9UGJ0 569 aa13.04□□□□□ -0.32
CTDNEP1-202ENST00000570380 SEMA3EO15041 775 aa13.03□□□□□ -0.32
CTDNEP1-202ENST00000570380 MAPK4P31152 587 aa13.03□□□□□ -0.32
CTDNEP1-202ENST00000570380 POTEEQ6S8J3 1075 aa13.03□□□□□ -0.32
CTDNEP1-202ENST00000570380 DZIP1Q86YF9 867 aaKnown RBP13.03□□□□□ -0.32
CTDNEP1-202ENST00000570380 USP38Q8NB14 1042 aa13.03□□□□□ -0.32
CTDNEP1-202ENST00000570380 APBA2Q99767 749 aa13.03□□□□□ -0.32
CTDNEP1-202ENST00000570380 MYO9BQ13459 2157 aa13.03□□□□□ -0.32
CTDNEP1-202ENST00000570380 NCOR1O75376 2440 aa13.02□□□□□ -0.32
CTDNEP1-202ENST00000570380 CDK5RAP2Q96SN8 1893 aa13.02□□□□□ -0.32
CTDNEP1-202ENST00000570380 NPM3O75607 178 aaKnown RBP13.02□□□□□ -0.33
CTDNEP1-202ENST00000570380 PLA2G5P39877 138 aa13.02□□□□□ -0.33
CTDNEP1-202ENST00000570380 BACE1P56817 501 aa13.02□□□□□ -0.33
CTDNEP1-202ENST00000570380 ERVK-9P63128 1117 aa13.02□□□□□ -0.33
CTDNEP1-202ENST00000570380 ERVK-24P63145 666 aa13.02□□□□□ -0.33
CTDNEP1-202ENST00000570380 MTMR2Q13614 643 aa13.02□□□□□ -0.33
CTDNEP1-202ENST00000570380 ATP2B3Q16720 1220 aa13.02□□□□□ -0.33
CTDNEP1-202ENST00000570380 CCDC184Q52MB2 194 aa13.02□□□□□ -0.33
CTDNEP1-202ENST00000570380 NCBP3Q53F19 620 aaKnown RBP13.02□□□□□ -0.33
CTDNEP1-202ENST00000570380 PLEKHH3Q7Z736 793 aa13.02□□□□□ -0.33
CTDNEP1-202ENST00000570380 ZGPATQ8N5A5 531 aaKnown RBP13.02□□□□□ -0.33
CTDNEP1-202ENST00000570380 LPAR1Q92633 364 aa13.02□□□□□ -0.33
CTDNEP1-202ENST00000570380 BADQ92934 168 aa13.02□□□□□ -0.33
CTDNEP1-202ENST00000570380 AS3MTQ9HBK9 375 aa13.02□□□□□ -0.33
CTDNEP1-202ENST00000570380 FLRT1Q9NZU1 646 aa13.02□□□□□ -0.33
CTDNEP1-202ENST00000570380 DDX20Q9UHI6 824 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms