RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 CRBNQ96SW2 442 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 ZIC5Q96T25 663 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 LRRC3Q9BY71 257 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 C14orf93Q9H972 538 aaKnown RBP4.26□□□□□ -1.73
CNOT1-221ENST00000569924 LIN7BQ9HAP6 207 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 ST7Q9NRC1 585 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 LATS2Q9NRM7 1088 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 GEMIN8Q9NWZ8 242 aaKnown RBP4.26□□□□□ -1.73
CNOT1-221ENST00000569924 ACTR10Q9NZ32 417 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 STK26Q9P289 416 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 SALL4Q9UJQ4 1053 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 PPT2Q9UMR5 302 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 LEMD3Q9Y2U8 911 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 TNS3Q68CZ2 1445 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 ARHGEF10O15013 1369 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 DHX57Q6P158 1386 aaKnown RBP4.26□□□□□ -1.73
CNOT1-221ENST00000569924 PLCH1Q4KWH8 1693 aa4.26□□□□□ -1.73
CNOT1-221ENST00000569924 BRWD3Q6RI45 1802 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 LRP5O75197 1615 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 PEX14O75381 377 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 ALDH1A1P00352 501 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 HCLS1P14317 486 aaPredicted RBP4.25□□□□□ -1.73
CNOT1-221ENST00000569924 TFE3P19532 575 aaPredicted RBP4.25□□□□□ -1.73
CNOT1-221ENST00000569924 ATP4AP20648 1035 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 PHKA2P46019 1235 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 RPS26P62854 115 aaKnown RBP4.25□□□□□ -1.73
CNOT1-221ENST00000569924 TYRO3Q06418 890 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 TCEA2Q15560 299 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 FXNQ16595 210 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 TKFCQ3LXA3 575 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 RGL3Q3MIN7 710 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 SEZ6Q53EL9 994 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 TPTE2Q6XPS3 522 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 LRRC69Q6ZNQ3 347 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 LIAT1Q6ZQX7 453 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 KRT27Q7Z3Y8 459 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 ANKARQ7Z5J8 1434 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 CCDC84Q86UT8 332 aaPredicted RBP4.25□□□□□ -1.73
CNOT1-221ENST00000569924 FERMT3Q86UX7 667 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 TRIM42Q8IWZ5 723 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 CCAR1Q8IX12 1150 aaKnown RBP4.25□□□□□ -1.73
CNOT1-221ENST00000569924 MORC4Q8TE76 937 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 TCF12Q99081 682 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 MPHOSPH9Q99550 1183 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 ABCA3Q99758 1704 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 IER2Q9BTL4 223 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.25□□□□□ -1.73
CNOT1-221ENST00000569924 MAPK8IP1Q9UQF2 711 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 WASF2Q9Y6W5 498 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 DLC1Q96QB1 1528 aa4.25□□□□□ -1.73
CNOT1-221ENST00000569924 RGPD8O14715 1765 aaPredicted RBP4.25□□□□□ -1.73
CNOT1-221ENST00000569924 ADGRB2O60241 1585 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 FAM83GA6ND36 823 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 ENC1O14682 589 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 TRIM37O94972 964 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 CYP2E1P05181 493 aaPredicted RBP4.24□□□□□ -1.73
CNOT1-221ENST00000569924 CELA3AP09093 270 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 ZNF165P49910 485 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 CASP7P55210 303 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 MTERF2Q49AM1 385 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 ARSJQ5FYB0 599 aaPredicted RBP4.24□□□□□ -1.73
CNOT1-221ENST00000569924 WDR44Q5JSH3 913 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 ODR4Q5SWX8 454 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 TTBK2Q6IQ55 1244 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 DEFB132Q7Z7B7 95 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 CCNJLQ8IV13 435 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 REXO1Q8N1G1 1221 aaKnown RBP4.24□□□□□ -1.73
CNOT1-221ENST00000569924 PGBD3Q8N328 593 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 PRPF38AQ8NAV1 312 aaKnown RBP4.24□□□□□ -1.73
CNOT1-221ENST00000569924 GATAD2BQ8WXI9 593 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 CEP63Q96MT8 703 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 NECAB3Q96P71 396 aaPredicted RBP4.24□□□□□ -1.73
CNOT1-221ENST00000569924 FERD3LQ96RJ6 166 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 CEP89Q96ST8 783 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 ZFAND3Q9H8U3 227 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 HOMER2Q9NSB8 354 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 DZANK1Q9NVP4 752 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 GABBR1Q9UBS5 961 aa4.24□□□□□ -1.73
CNOT1-221ENST00000569924 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.24□□□□□ -1.73
CNOT1-221ENST00000569924 EIF3AQ14152 1382 aaKnown RBP4.24□□□□□ -1.73
CNOT1-221ENST00000569924 TRPM3Q9HCF6 1732 aaPredicted RBP4.24□□□□□ -1.73
CNOT1-221ENST00000569924 ALS2Q96Q42 1657 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 DISP2A7MBM2 1401 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 COL14A1Q05707 1796 aaKnown RBP4.23□□□□□ -1.73
CNOT1-221ENST00000569924 PHF20L1A8MW92 1017 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 TLR3O15455 904 aaKnown RBP4.23□□□□□ -1.73
CNOT1-221ENST00000569924 ITGBL1O95965 494 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-221ENST00000569924 F13A1P00488 732 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 IMPDH2P12268 514 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 MCM4P33991 863 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 BAG6P46379 1132 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 WDR4P57081 412 aaKnown RBP4.23□□□□□ -1.73
CNOT1-221ENST00000569924 TBX4P57082 545 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 MPP2Q14168 576 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 CWF19L2Q2TBE0 894 aaKnown RBP4.23□□□□□ -1.73
CNOT1-221ENST00000569924 DALRD3Q5D0E6 543 aaKnown RBP4.23□□□□□ -1.73
CNOT1-221ENST00000569924 FBXW10Q5XX13 1052 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 SMC5Q8IY18 1101 aa4.23□□□□□ -1.73
CNOT1-221ENST00000569924 RBBP8NLQ8NC74 664 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-221ENST00000569924 OR13H1Q8NG92 308 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms