RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 ZMYM6O95789 1325 aa10.88□□□□□ -0.67
CHD9-219ENST00000569225 UBE2Q2LH0YL09 131 aa10.87□□□□□ -0.67
CHD9-219ENST00000569225 USP2O75604 605 aaPredicted RBP10.87□□□□□ -0.67
CHD9-219ENST00000569225 MAP3K9P80192 1104 aa10.87□□□□□ -0.67
CHD9-219ENST00000569225 SLC4A8Q2Y0W8 1093 aa10.87□□□□□ -0.67
CHD9-219ENST00000569225 C12orf60Q5U649 245 aa10.87□□□□□ -0.67
CHD9-219ENST00000569225 CTR9Q6PD62 1173 aa10.87□□□□□ -0.67
CHD9-219ENST00000569225 METTL16Q86W50 562 aaKnown RBP10.87□□□□□ -0.67
CHD9-219ENST00000569225 KLRG1Q96E93 195 aa10.87□□□□□ -0.67
CHD9-219ENST00000569225 HHIPL1Q96JK4 782 aa10.87□□□□□ -0.67
CHD9-219ENST00000569225 ESYT1Q9BSJ8 1104 aa10.87□□□□□ -0.67
CHD9-219ENST00000569225 DSCC1Q9BVC3 393 aa10.87□□□□□ -0.67
CHD9-219ENST00000569225 ZNF287Q9HBT7 754 aa10.87□□□□□ -0.67
CHD9-219ENST00000569225 EPB41L4AQ9HCS5 686 aaPredicted RBP10.87□□□□□ -0.67
CHD9-219ENST00000569225 SWAP70Q9UH65 585 aa10.87□□□□□ -0.67
CHD9-219ENST00000569225 CTNNA3Q9UI47 895 aa10.87□□□□□ -0.67
CHD9-219ENST00000569225 PAPPA2Q9BXP8 1791 aa10.87□□□□□ -0.67
CHD9-219ENST00000569225 MYH7P12883 1935 aa10.87□□□□□ -0.67
CHD9-219ENST00000569225 MINDY4BA8MYZ0 360 aa10.87□□□□□ -0.67
CHD9-219ENST00000569225 PLCD1P51178 756 aa10.87□□□□□ -0.67
CHD9-219ENST00000569225 LDLRAD1Q5T700 205 aa10.87□□□□□ -0.67
CHD9-219ENST00000569225 VPS53Q5VIR6 699 aa10.87□□□□□ -0.67
CHD9-219ENST00000569225 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.87□□□□□ -0.67
CHD9-219ENST00000569225 ZNF112Q9UJU3 913 aa10.87□□□□□ -0.67
CHD9-219ENST00000569225 CTNND1O60716 968 aaKnown RBP10.86□□□□□ -0.67
CHD9-219ENST00000569225 EIF5BO60841 1220 aaKnown RBP10.86□□□□□ -0.67
CHD9-219ENST00000569225 CYP2D6P10635 497 aa10.86□□□□□ -0.67
CHD9-219ENST00000569225 PAXIP1Q6ZW49 1069 aaPredicted RBP10.86□□□□□ -0.67
CHD9-219ENST00000569225 MOB2Q70IA6 237 aa10.86□□□□□ -0.67
CHD9-219ENST00000569225 PICK1Q9NRD5 415 aa10.86□□□□□ -0.67
CHD9-219ENST00000569225 RASSF10A6NK89 507 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 FGAP02671 866 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 ECE1P42892 770 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 ZNF157P51786 506 aaPredicted RBP10.85□□□□□ -0.67
CHD9-219ENST00000569225 PPARAQ07869 468 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 DEFB115Q30KQ5 88 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 RGMBQ6NW40 437 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 CCDC102AQ96A19 550 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 SLC10A4Q96EP9 437 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 GINM1Q9NU53 330 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 FZD1Q9UP38 647 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 U3KPZ7 1027 aaPredicted RBP10.85□□□□□ -0.67
CHD9-219ENST00000569225 CYP2D7A0A087X1C5 515 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 FAM196BA6NMK8 535 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 PHF20L1A8MW92 1017 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 FOXP2O15409 715 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 GABPAQ06546 454 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 PDE4BQ07343 736 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 VGLL4Q14135 290 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 NOL9Q5SY16 702 aaKnown RBP10.85□□□□□ -0.67
CHD9-219ENST00000569225 TATDN1Q6P1N9 297 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 C16orf86Q6ZW13 317 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 SCYL3Q8IZE3 742 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 ANO2Q9NQ90 1003 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 ROBO3Q96MS0 1386 aa10.85□□□□□ -0.67
CHD9-219ENST00000569225 ZNF213O14771 459 aa10.84□□□□□ -0.67
CHD9-219ENST00000569225 INPP5BP32019 993 aa10.84□□□□□ -0.67
CHD9-219ENST00000569225 IMMTQ16891 758 aaKnown RBP10.84□□□□□ -0.67
CHD9-219ENST00000569225 CERKLQ49MI3 558 aaPredicted RBP10.84□□□□□ -0.67
CHD9-219ENST00000569225 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.84□□□□□ -0.67
CHD9-219ENST00000569225 ZKSCAN4Q969J2 545 aaPredicted RBP10.84□□□□□ -0.67
CHD9-219ENST00000569225 IL25Q9H293 177 aa10.84□□□□□ -0.67
CHD9-219ENST00000569225 DNAJC18Q9H819 358 aa10.84□□□□□ -0.67
CHD9-219ENST00000569225 ELP3Q9H9T3 547 aa10.84□□□□□ -0.67
CHD9-219ENST00000569225 MKNK2Q9HBH9 465 aa10.84□□□□□ -0.67
CHD9-219ENST00000569225 ANAPC4Q9UJX5 808 aa10.84□□□□□ -0.67
CHD9-219ENST00000569225 REC8O95072 547 aa10.83□□□□□ -0.68
CHD9-219ENST00000569225 ASNSP08243 561 aa10.83□□□□□ -0.68
CHD9-219ENST00000569225 PCP11498 1178 aaKnown RBP10.83□□□□□ -0.68
CHD9-219ENST00000569225 SHMT1P34896 483 aa10.83□□□□□ -0.68
CHD9-219ENST00000569225 CAP2P40123 477 aa10.83□□□□□ -0.68
CHD9-219ENST00000569225 CDK8P49336 464 aa10.83□□□□□ -0.68
CHD9-219ENST00000569225 ERO1BQ86YB8 467 aa10.83□□□□□ -0.68
CHD9-219ENST00000569225 DYNLL2Q96FJ2 89 aa10.83□□□□□ -0.68
CHD9-219ENST00000569225 CLMNQ96JQ2 1002 aa10.83□□□□□ -0.68
CHD9-219ENST00000569225 CCDC17Q96LX7 622 aa10.83□□□□□ -0.68
CHD9-219ENST00000569225 RNF41Q9H4P4 317 aaPredicted RBP10.83□□□□□ -0.68
CHD9-219ENST00000569225 CABP5Q9NP86 173 aa10.83□□□□□ -0.68
CHD9-219ENST00000569225 AK9Q5TCS8 1911 aa10.83□□□□□ -0.68
CHD9-219ENST00000569225 SPDYE5A6NIY4 337 aa10.83□□□□□ -0.68
CHD9-219ENST00000569225 NT5C2P49902 561 aa10.83□□□□□ -0.68
CHD9-219ENST00000569225 ABCB5Q2M3G0 1257 aa10.83□□□□□ -0.68
CHD9-219ENST00000569225 TBC1D2Q9BYX2 928 aa10.83□□□□□ -0.68
CHD9-219ENST00000569225 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.83□□□□□ -0.68
CHD9-219ENST00000569225 SNCAIPQ9Y6H5 919 aa10.83□□□□□ -0.68
CHD9-219ENST00000569225 POLR2AP24928 1970 aaKnown RBP10.83□□□□□ -0.68
CHD9-219ENST00000569225 NAV1Q8NEY1 1877 aa10.82□□□□□ -0.68
CHD9-219ENST00000569225 FOCADQ5VW36 1801 aa10.82□□□□□ -0.68
CHD9-219ENST00000569225 DDX60LQ5H9U9 1706 aaKnown RBP10.82□□□□□ -0.68
CHD9-219ENST00000569225 TRPM7Q96QT4 1865 aa10.82□□□□□ -0.68
CHD9-219ENST00000569225 MPHOSPH10O00566 681 aaKnown RBP10.82□□□□□ -0.68
CHD9-219ENST00000569225 SLC10A3P09131 477 aa10.82□□□□□ -0.68
CHD9-219ENST00000569225 SLURP2P0DP57 97 aa10.82□□□□□ -0.68
CHD9-219ENST00000569225 ZBTB48P10074 688 aaPredicted RBP10.82□□□□□ -0.68
CHD9-219ENST00000569225 HTRA3P83110 453 aa10.82□□□□□ -0.68
CHD9-219ENST00000569225 PTH1RQ03431 593 aa10.82□□□□□ -0.68
CHD9-219ENST00000569225 PPATQ06203 517 aa10.82□□□□□ -0.68
CHD9-219ENST00000569225 NOGQ13253 232 aa10.82□□□□□ -0.68
CHD9-219ENST00000569225 RASAL3Q86YV0 1011 aa10.82□□□□□ -0.68
CHD9-219ENST00000569225 ZNF444Q8N0Y2 327 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms