RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 FOXP4Q8IVH2 680 aaPredicted RBP15.68■□□□□ 0.1
CNOT1-213ENST00000568158 EVI5LQ96CN4 794 aa15.68■□□□□ 0.1
CNOT1-213ENST00000568158 SEC62Q99442 399 aaKnown RBP15.68■□□□□ 0.1
CNOT1-213ENST00000568158 OSBPL3Q9H4L5 887 aa15.68■□□□□ 0.1
CNOT1-213ENST00000568158 MYH1P12882 1939 aa15.68■□□□□ 0.1
CNOT1-213ENST00000568158 OTOFQ9HC10 1997 aa15.67■□□□□ 0.1
CNOT1-213ENST00000568158 FOCADQ5VW36 1801 aa15.67■□□□□ 0.1
CNOT1-213ENST00000568158 TRIM6-TRIM34B2RNG4 842 aa15.67■□□□□ 0.1
CNOT1-213ENST00000568158 ZFYP08048 801 aaPredicted RBP15.67■□□□□ 0.1
CNOT1-213ENST00000568158 TM4SF4P48230 202 aa15.67■□□□□ 0.1
CNOT1-213ENST00000568158 PLCD1P51178 756 aa15.67■□□□□ 0.1
CNOT1-213ENST00000568158 EVX2Q03828 476 aa15.67■□□□□ 0.1
CNOT1-213ENST00000568158 APPBP2Q92624 585 aa15.67■□□□□ 0.1
CNOT1-213ENST00000568158 RILPL2Q969X0 211 aa15.67■□□□□ 0.1
CNOT1-213ENST00000568158 AIDAQ96BJ3 306 aa15.67■□□□□ 0.1
CNOT1-213ENST00000568158 OTUD5Q96G74 571 aa15.67■□□□□ 0.1
CNOT1-213ENST00000568158 STRBPQ96SI9 672 aaKnown RBP15.67■□□□□ 0.1
CNOT1-213ENST00000568158 TSKSQ9UJT2 592 aa15.67■□□□□ 0.1
CNOT1-213ENST00000568158 SLC4A4Q9Y6R1 1079 aa15.67■□□□□ 0.1
CNOT1-213ENST00000568158 SPDYE5A6NIY4 337 aa15.66■□□□□ 0.1
CNOT1-213ENST00000568158 M0R2C6 588 aa15.66■□□□□ 0.1
CNOT1-213ENST00000568158 POLR3DP05423 398 aaPredicted RBP15.66■□□□□ 0.1
CNOT1-213ENST00000568158 ZBTB48P10074 688 aaPredicted RBP15.66■□□□□ 0.1
CNOT1-213ENST00000568158 ERO1BQ86YB8 467 aa15.66■□□□□ 0.1
CNOT1-213ENST00000568158 BEGAINQ9BUH8 593 aa15.66■□□□□ 0.1
CNOT1-213ENST00000568158 DCP1AQ9NPI6 582 aaPredicted RBP15.66■□□□□ 0.1
CNOT1-213ENST00000568158 RNF186Q9NXI6 227 aa15.66■□□□□ 0.1
CNOT1-213ENST00000568158 MCM9Q9NXL9 1143 aa15.66■□□□□ 0.1
CNOT1-213ENST00000568158 PCNTO95613 3336 aa15.66■□□□□ 0.1
CNOT1-213ENST00000568158 COL2A1P02458 1487 aaPredicted RBP15.65■□□□□ 0.1
CNOT1-213ENST00000568158 CTNND1O60716 968 aaKnown RBP15.65■□□□□ 0.1
CNOT1-213ENST00000568158 TRPA1O75762 1119 aa15.65■□□□□ 0.1
CNOT1-213ENST00000568158 HLA-DOAP06340 250 aa15.65■□□□□ 0.1
CNOT1-213ENST00000568158 CYP2D6P10635 497 aa15.65■□□□□ 0.1
CNOT1-213ENST00000568158 LRRFIP1Q32MZ4 808 aaKnown RBP15.65■□□□□ 0.1
CNOT1-213ENST00000568158 ZMYM1Q5SVZ6 1142 aa15.65■□□□□ 0.1
CNOT1-213ENST00000568158 NOL9Q5SY16 702 aaKnown RBP15.65■□□□□ 0.1
CNOT1-213ENST00000568158 TTC6Q86TZ1 520 aa15.65■□□□□ 0.1
CNOT1-213ENST00000568158 CCDC84Q86UT8 332 aaPredicted RBP15.65■□□□□ 0.1
CNOT1-213ENST00000568158 METTL16Q86W50 562 aaKnown RBP15.65■□□□□ 0.1
CNOT1-213ENST00000568158 REM2Q8IYK8 340 aaPredicted RBP15.65■□□□□ 0.1
CNOT1-213ENST00000568158 CRACR2BQ8N4Y2 399 aaPredicted RBP15.65■□□□□ 0.1
CNOT1-213ENST00000568158 MS4A4AQ96JQ5 239 aa15.65■□□□□ 0.1
CNOT1-213ENST00000568158 DNAJC18Q9H819 358 aa15.65■□□□□ 0.1
CNOT1-213ENST00000568158 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.65■□□□□ 0.1
CNOT1-213ENST00000568158 HERC5Q9UII4 1024 aaKnown RBP15.65■□□□□ 0.1
CNOT1-213ENST00000568158 SIPA1L1O43166 1804 aa15.64■□□□□ 0.09
CNOT1-213ENST00000568158 MANSC4A6NHS7 340 aaPredicted RBP15.64■□□□□ 0.09
CNOT1-213ENST00000568158 GSG1L2A8MUP6 293 aa15.64■□□□□ 0.09
CNOT1-213ENST00000568158 SMIM22K7EJ46 135 aa15.64■□□□□ 0.09
CNOT1-213ENST00000568158 IRF6O14896 467 aa15.64■□□□□ 0.09
CNOT1-213ENST00000568158 NEFLP07196 543 aa15.64■□□□□ 0.09
CNOT1-213ENST00000568158 JAG1P78504 1218 aa15.64■□□□□ 0.09
CNOT1-213ENST00000568158 SCYL3Q8IZE3 742 aa15.64■□□□□ 0.09
CNOT1-213ENST00000568158 PTPN18Q99952 460 aa15.64■□□□□ 0.09
CNOT1-213ENST00000568158 TRIM34Q9BYJ4 488 aa15.64■□□□□ 0.09
CNOT1-213ENST00000568158 ATP8A2Q9NTI2 1148 aa15.64■□□□□ 0.09
CNOT1-213ENST00000568158 THSD7BQ9C0I4 1608 aa15.64■□□□□ 0.09
CNOT1-213ENST00000568158 CYP2D7A0A087X1C5 515 aa15.63■□□□□ 0.09
CNOT1-213ENST00000568158 USP17L12C9JPN9 530 aa15.63■□□□□ 0.09
CNOT1-213ENST00000568158 USP17L21D6R901 530 aa15.63■□□□□ 0.09
CNOT1-213ENST00000568158 GPAA1O43292 621 aa15.63■□□□□ 0.09
CNOT1-213ENST00000568158 HSPA8P11142 646 aaKnown RBP15.63■□□□□ 0.09
CNOT1-213ENST00000568158 PTPRAP18433 802 aa15.63■□□□□ 0.09
CNOT1-213ENST00000568158 CAP2P40123 477 aa15.63■□□□□ 0.09
CNOT1-213ENST00000568158 LBX1P52954 281 aa15.63■□□□□ 0.09
CNOT1-213ENST00000568158 INHBEP58166 350 aa15.63■□□□□ 0.09
CNOT1-213ENST00000568158 PPATQ06203 517 aa15.63■□□□□ 0.09
CNOT1-213ENST00000568158 SREBF2Q12772 1141 aa15.63■□□□□ 0.09
CNOT1-213ENST00000568158 SHROOM1Q2M3G4 852 aaPredicted RBP15.63■□□□□ 0.09
CNOT1-213ENST00000568158 CCDC129Q6ZRS4 1044 aa15.63■□□□□ 0.09
CNOT1-213ENST00000568158 ZHX2Q9Y6X8 837 aa15.63■□□□□ 0.09
CNOT1-213ENST00000568158 BAZ2AQ9UIF9 1905 aaKnown RBP15.62■□□□□ 0.09
CNOT1-213ENST00000568158 TESPA1A2RU30 521 aaPredicted RBP15.62■□□□□ 0.09
CNOT1-213ENST00000568158 PATL2C9JE40 543 aaKnown RBP15.62■□□□□ 0.09
CNOT1-213ENST00000568158 TBC1D8O95759 1140 aa15.62■□□□□ 0.09
CNOT1-213ENST00000568158 CTCFP49711 727 aaPredicted RBP15.62■□□□□ 0.09
CNOT1-213ENST00000568158 PPIL2Q13356 520 aa15.62■□□□□ 0.09
CNOT1-213ENST00000568158 CTR9Q6PD62 1173 aa15.62■□□□□ 0.09
CNOT1-213ENST00000568158 SKAP1Q86WV1 359 aa15.62■□□□□ 0.09
CNOT1-213ENST00000568158 IFNL1Q8IU54 200 aa15.62■□□□□ 0.09
CNOT1-213ENST00000568158 BRI3BPQ8WY22 251 aa15.62■□□□□ 0.09
CNOT1-213ENST00000568158 DYNLL2Q96FJ2 89 aa15.62■□□□□ 0.09
CNOT1-213ENST00000568158 FAM227BQ96M60 508 aa15.62■□□□□ 0.09
CNOT1-213ENST00000568158 PICK1Q9NRD5 415 aa15.62■□□□□ 0.09
CNOT1-213ENST00000568158 SERPINB13Q9UIV8 391 aa15.62■□□□□ 0.09
CNOT1-213ENST00000568158 CCL15-CCL14A0A0B4J2E2 113 aa15.61■□□□□ 0.09
CNOT1-213ENST00000568158 IGF2BP3O00425 579 aaKnown RBP eCLIP15.61■□□□□ 0.09
CNOT1-213ENST00000568158 GDF11O95390 407 aa15.61■□□□□ 0.09
CNOT1-213ENST00000568158 APPP05067 770 aa15.61■□□□□ 0.09
CNOT1-213ENST00000568158 SDSP20132 328 aa15.61■□□□□ 0.09
CNOT1-213ENST00000568158 GTF2A2P52657 109 aa15.61■□□□□ 0.09
CNOT1-213ENST00000568158 CCL15Q16663 113 aa15.61■□□□□ 0.09
CNOT1-213ENST00000568158 C12orf60Q5U649 245 aa15.61■□□□□ 0.09
CNOT1-213ENST00000568158 CENPQQ7L2Z9 268 aaPredicted RBP15.61■□□□□ 0.09
CNOT1-213ENST00000568158 CCDC136Q96JN2 1154 aa15.61■□□□□ 0.09
CNOT1-213ENST00000568158 EHD4Q9H223 541 aa15.61■□□□□ 0.09
CNOT1-213ENST00000568158 AFG3L2Q9Y4W6 797 aa15.61■□□□□ 0.09
CNOT1-213ENST00000568158 GSPT1P15170 499 aaKnown RBP15.6■□□□□ 0.09
CNOT1-213ENST00000568158 GABPAQ06546 454 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms