RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 HPS5Q9UPZ3 1129 aa8.43□□□□□ -1.06
SF3B3-209ENST00000567635 ZHX2Q9Y6X8 837 aa8.43□□□□□ -1.06
SF3B3-209ENST00000567635 ATRNL1Q5VV63 1379 aa8.43□□□□□ -1.06
SF3B3-209ENST00000567635 MAST2Q6P0Q8 1798 aa8.43□□□□□ -1.06
SF3B3-209ENST00000567635 MYH7P12883 1935 aa8.42□□□□□ -1.06
SF3B3-209ENST00000567635 TLR2O60603 784 aa8.42□□□□□ -1.06
SF3B3-209ENST00000567635 SLURP2P0DP57 97 aa8.42□□□□□ -1.06
SF3B3-209ENST00000567635 TTF1Q15361 905 aaPredicted RBP8.42□□□□□ -1.06
SF3B3-209ENST00000567635 FASTKD5Q7L8L6 764 aaKnown RBP8.42□□□□□ -1.06
SF3B3-209ENST00000567635 OTOP1Q7RTM1 612 aa8.42□□□□□ -1.06
SF3B3-209ENST00000567635 ANKRD23Q86SG2 305 aa8.42□□□□□ -1.06
SF3B3-209ENST00000567635 ADGRA1Q86SQ6 560 aa8.42□□□□□ -1.06
SF3B3-209ENST00000567635 CERS3Q8IU89 383 aa8.42□□□□□ -1.06
SF3B3-209ENST00000567635 FOXP4Q8IVH2 680 aaPredicted RBP8.42□□□□□ -1.06
SF3B3-209ENST00000567635 CD99L2Q8TCZ2 262 aa8.42□□□□□ -1.06
SF3B3-209ENST00000567635 ANTXR1Q9H6X2 564 aa8.42□□□□□ -1.06
SF3B3-209ENST00000567635 EFCC1Q9HA90 598 aa8.42□□□□□ -1.06
SF3B3-209ENST00000567635 PI4KBQ9UBF8 816 aa8.42□□□□□ -1.06
SF3B3-209ENST00000567635 AFG3L2Q9Y4W6 797 aa8.42□□□□□ -1.06
SF3B3-209ENST00000567635 TRIM17Q9Y577 477 aa8.42□□□□□ -1.06
SF3B3-209ENST00000567635 NDUFB9Q9Y6M9 179 aa8.42□□□□□ -1.06
SF3B3-209ENST00000567635 COL2A1P02458 1487 aaPredicted RBP8.42□□□□□ -1.06
SF3B3-209ENST00000567635 MGAMO43451 1857 aa8.42□□□□□ -1.06
SF3B3-209ENST00000567635 PDHXO00330 501 aa8.41□□□□□ -1.06
SF3B3-209ENST00000567635 CAP2P40123 477 aa8.41□□□□□ -1.06
SF3B3-209ENST00000567635 DYNLL1P63167 89 aaKnown RBP8.41□□□□□ -1.06
SF3B3-209ENST00000567635 MLLT1Q03111 559 aaPredicted RBP8.41□□□□□ -1.06
SF3B3-209ENST00000567635 MOGSQ13724 837 aa8.41□□□□□ -1.06
SF3B3-209ENST00000567635 MAPKAPK5Q8IW41 473 aa8.41□□□□□ -1.06
SF3B3-209ENST00000567635 MAGEB6Q8N7X4 407 aa8.41□□□□□ -1.06
SF3B3-209ENST00000567635 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.41□□□□□ -1.06
SF3B3-209ENST00000567635 LRRCC1Q9C099 1032 aa8.41□□□□□ -1.06
SF3B3-209ENST00000567635 HERC5Q9UII4 1024 aaKnown RBP8.41□□□□□ -1.06
SF3B3-209ENST00000567635 PALD1Q9ULE6 856 aa8.41□□□□□ -1.06
SF3B3-209ENST00000567635 SIPA1L1O43166 1804 aa8.4□□□□□ -1.06
SF3B3-209ENST00000567635 A0A0G2JLL6 359 aaPredicted RBP8.4□□□□□ -1.06
SF3B3-209ENST00000567635 FAM196BA6NMK8 535 aa8.4□□□□□ -1.06
SF3B3-209ENST00000567635 ATP5JP18859 108 aa8.4□□□□□ -1.06
SF3B3-209ENST00000567635 KIF22Q14807 665 aa8.4□□□□□ -1.06
SF3B3-209ENST00000567635 SLC9C2Q5TAH2 1124 aa8.4□□□□□ -1.06
SF3B3-209ENST00000567635 GPAT2Q6NUI2 795 aa8.4□□□□□ -1.06
SF3B3-209ENST00000567635 C17orf99Q6UX52 265 aa8.4□□□□□ -1.06
SF3B3-209ENST00000567635 GADL1Q6ZQY3 521 aa8.4□□□□□ -1.06
SF3B3-209ENST00000567635 PRRT2Q7Z6L0 340 aaPredicted RBP8.4□□□□□ -1.06
SF3B3-209ENST00000567635 MIGA1Q8NAN2 632 aa8.4□□□□□ -1.06
SF3B3-209ENST00000567635 TRIM34Q9BYJ4 488 aa8.4□□□□□ -1.06
SF3B3-209ENST00000567635 SAP30BPQ9UHR5 308 aaKnown RBP8.4□□□□□ -1.06
SF3B3-209ENST00000567635 PTPN22Q9Y2R2 807 aa8.4□□□□□ -1.06
SF3B3-209ENST00000567635 BAZ2AQ9UIF9 1905 aaKnown RBP8.4□□□□□ -1.06
SF3B3-209ENST00000567635 MYH8P13535 1937 aa8.39□□□□□ -1.07
SF3B3-209ENST00000567635 FLT1P17948 1338 aa8.39□□□□□ -1.07
SF3B3-209ENST00000567635 MAGEB6P1A0A0J9YX57 407 aa8.39□□□□□ -1.07
SF3B3-209ENST00000567635 TRIM75PA6NK02 468 aa8.39□□□□□ -1.07
SF3B3-209ENST00000567635 USP17L5A8MUK1 530 aa8.39□□□□□ -1.07
SF3B3-209ENST00000567635 GOLIM4O00461 696 aa8.39□□□□□ -1.07
SF3B3-209ENST00000567635 GNRH1P01148 92 aa8.39□□□□□ -1.07
SF3B3-209ENST00000567635 HLA-DOAP06340 250 aa8.39□□□□□ -1.07
SF3B3-209ENST00000567635 USP5P45974 858 aa8.39□□□□□ -1.07
SF3B3-209ENST00000567635 SOX10P56693 466 aa8.39□□□□□ -1.07
SF3B3-209ENST00000567635 LACTBP83111 547 aaPredicted RBP8.39□□□□□ -1.07
SF3B3-209ENST00000567635 SPP2Q13103 211 aa8.39□□□□□ -1.07
SF3B3-209ENST00000567635 RRP1BQ14684 758 aaKnown RBP8.39□□□□□ -1.07
SF3B3-209ENST00000567635 METTL16Q86W50 562 aaKnown RBP8.39□□□□□ -1.07
SF3B3-209ENST00000567635 CRACR2BQ8N4Y2 399 aaPredicted RBP8.39□□□□□ -1.07
SF3B3-209ENST00000567635 ZNF280CQ8ND82 737 aa8.39□□□□□ -1.07
SF3B3-209ENST00000567635 DNAJC2Q99543 621 aaKnown RBP8.39□□□□□ -1.07
SF3B3-209ENST00000567635 TBC1D2Q9BYX2 928 aa8.39□□□□□ -1.07
SF3B3-209ENST00000567635 BOLA2Q9H3K6 86 aa8.39□□□□□ -1.07
SF3B3-209ENST00000567635 DCTPP1Q9H773 170 aa8.39□□□□□ -1.07
SF3B3-209ENST00000567635 CPA4Q9UI42 421 aa8.39□□□□□ -1.07
SF3B3-209ENST00000567635 SLC45A1Q9Y2W3 748 aa8.39□□□□□ -1.07
SF3B3-209ENST00000567635 ZSWIM8A7E2V4 1837 aa8.38□□□□□ -1.07
SF3B3-209ENST00000567635 SMARCA5O60264 1052 aaPredicted RBP8.38□□□□□ -1.07
SF3B3-209ENST00000567635 PDE6AP16499 860 aa8.38□□□□□ -1.07
SF3B3-209ENST00000567635 CAP1Q01518 475 aa8.38□□□□□ -1.07
SF3B3-209ENST00000567635 TTC6Q86TZ1 520 aa8.38□□□□□ -1.07
SF3B3-209ENST00000567635 CCDC84Q86UT8 332 aaPredicted RBP8.38□□□□□ -1.07
SF3B3-209ENST00000567635 PARK7Q99497 189 aaKnown RBP8.38□□□□□ -1.07
SF3B3-209ENST00000567635 HAUS7Q99871 368 aa8.38□□□□□ -1.07
SF3B3-209ENST00000567635 AS3MTQ9HBK9 375 aa8.38□□□□□ -1.07
SF3B3-209ENST00000567635 GINM1Q9NU53 330 aa8.38□□□□□ -1.07
SF3B3-209ENST00000567635 PAG1Q9NWQ8 432 aa8.38□□□□□ -1.07
SF3B3-209ENST00000567635 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.38□□□□□ -1.07
SF3B3-209ENST00000567635 ADGRA2Q96PE1 1338 aa8.37□□□□□ -1.07
SF3B3-209ENST00000567635 ZNF532Q9HCE3 1301 aa8.37□□□□□ -1.07
SF3B3-209ENST00000567635 TCRBV5S4A2TA0A5A2 114 aa8.37□□□□□ -1.07
SF3B3-209ENST00000567635 FMNL1O95466 1100 aaPredicted RBP8.37□□□□□ -1.07
SF3B3-209ENST00000567635 ASNSP08243 561 aa8.37□□□□□ -1.07
SF3B3-209ENST00000567635 CYP2C8P10632 490 aa8.37□□□□□ -1.07
SF3B3-209ENST00000567635 HOXD10P28358 340 aa8.37□□□□□ -1.07
SF3B3-209ENST00000567635 PSMC4P43686 418 aa8.37□□□□□ -1.07
SF3B3-209ENST00000567635 PRMT2P55345 433 aa8.37□□□□□ -1.07
SF3B3-209ENST00000567635 NBPF11Q86T75 865 aa8.37□□□□□ -1.07
SF3B3-209ENST00000567635 PROCA1Q8NCQ7 364 aaPredicted RBP8.37□□□□□ -1.07
SF3B3-209ENST00000567635 EDC3Q96F86 508 aaKnown RBP8.37□□□□□ -1.07
SF3B3-209ENST00000567635 YTHDC1Q96MU7 727 aaKnown RBP8.37□□□□□ -1.07
SF3B3-209ENST00000567635 RIOK1Q9BRS2 568 aaKnown RBP8.37□□□□□ -1.07
SF3B3-209ENST00000567635 WDR18Q9BV38 432 aa8.37□□□□□ -1.07
SF3B3-209ENST00000567635 CRNKL1Q9BZJ0 848 aaKnown RBP8.37□□□□□ -1.07
SF3B3-209ENST00000567635 ARHGAP39Q9C0H5 1083 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms