RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 PICK1Q9NRD5 415 aa18.17■□□□□ 0.5
COMMD4-219ENST00000567399 COL2A1P02458 1487 aaPredicted RBP18.17■□□□□ 0.5
COMMD4-219ENST00000567399 MYH7P12883 1935 aa18.17■□□□□ 0.5
COMMD4-219ENST00000567399 FAM196BA6NMK8 535 aa18.16■□□□□ 0.5
COMMD4-219ENST00000567399 SLC10A3P09131 477 aa18.16■□□□□ 0.5
COMMD4-219ENST00000567399 INPP5BP32019 993 aa18.16■□□□□ 0.5
COMMD4-219ENST00000567399 MAP2K2P36507 400 aa18.16■□□□□ 0.5
COMMD4-219ENST00000567399 TDO2P48775 406 aa18.16■□□□□ 0.5
COMMD4-219ENST00000567399 NMIQ13287 307 aaPredicted RBP18.16■□□□□ 0.5
COMMD4-219ENST00000567399 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.16■□□□□ 0.5
COMMD4-219ENST00000567399 PATL2C9JE40 543 aaKnown RBP18.15■□□□□ 0.5
COMMD4-219ENST00000567399 SLURP2P0DP57 97 aa18.15■□□□□ 0.5
COMMD4-219ENST00000567399 GSPT1P15170 499 aaKnown RBP18.15■□□□□ 0.5
COMMD4-219ENST00000567399 MFAP1P55081 439 aaKnown RBP18.15■□□□□ 0.5
COMMD4-219ENST00000567399 CWC27Q6UX04 472 aaKnown RBP18.15■□□□□ 0.5
COMMD4-219ENST00000567399 OPTNQ96CV9 577 aa18.15■□□□□ 0.5
COMMD4-219ENST00000567399 FAM227BQ96M60 508 aa18.15■□□□□ 0.5
COMMD4-219ENST00000567399 BEGAINQ9BUH8 593 aa18.15■□□□□ 0.5
COMMD4-219ENST00000567399 SERPINB13Q9UIV8 391 aa18.15■□□□□ 0.5
COMMD4-219ENST00000567399 ZNF112Q9UJU3 913 aa18.15■□□□□ 0.5
COMMD4-219ENST00000567399 FAM155AB1AL88 458 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-219ENST00000567399 USP17L12C9JPN9 530 aa18.14■□□□□ 0.49
COMMD4-219ENST00000567399 USP17L21D6R901 530 aa18.14■□□□□ 0.49
COMMD4-219ENST00000567399 CTNND1O60716 968 aaKnown RBP18.14■□□□□ 0.49
COMMD4-219ENST00000567399 PLCD1P51178 756 aa18.14■□□□□ 0.49
COMMD4-219ENST00000567399 KIF23Q02241 960 aaPredicted RBP18.14■□□□□ 0.49
COMMD4-219ENST00000567399 MAP3K10Q02779 954 aa18.14■□□□□ 0.49
COMMD4-219ENST00000567399 SPRYD7Q5W111 196 aa18.14■□□□□ 0.49
COMMD4-219ENST00000567399 CCDC129Q6ZRS4 1044 aa18.14■□□□□ 0.49
COMMD4-219ENST00000567399 SKAP1Q86WV1 359 aa18.14■□□□□ 0.49
COMMD4-219ENST00000567399 OTUD5Q96G74 571 aa18.14■□□□□ 0.49
COMMD4-219ENST00000567399 WNK4Q96J92 1243 aa18.14■□□□□ 0.49
COMMD4-219ENST00000567399 A0A0D9SFI3 127 aa18.13■□□□□ 0.49
COMMD4-219ENST00000567399 MINDY4BA8MYZ0 360 aa18.13■□□□□ 0.49
COMMD4-219ENST00000567399 MAP2K1Q02750 393 aaPredicted RBP18.13■□□□□ 0.49
COMMD4-219ENST00000567399 GIMAP6Q6P9H5 292 aa18.13■□□□□ 0.49
COMMD4-219ENST00000567399 ERO1BQ86YB8 467 aa18.13■□□□□ 0.49
COMMD4-219ENST00000567399 SCYL3Q8IZE3 742 aa18.13■□□□□ 0.49
COMMD4-219ENST00000567399 NAPBQ9H115 298 aa18.13■□□□□ 0.49
COMMD4-219ENST00000567399 ARPP21Q9UBL0 812 aaPredicted RBP18.13■□□□□ 0.49
COMMD4-219ENST00000567399 GSG1L2A8MUP6 293 aa18.12■□□□□ 0.49
COMMD4-219ENST00000567399 PHF20L1A8MW92 1017 aa18.12■□□□□ 0.49
COMMD4-219ENST00000567399 ZBTB48P10074 688 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-219ENST00000567399 CYP2D6P10635 497 aa18.12■□□□□ 0.49
COMMD4-219ENST00000567399 REM2Q8IYK8 340 aaPredicted RBP18.12■□□□□ 0.49
COMMD4-219ENST00000567399 IFNL3Q8IZI9 196 aa18.12■□□□□ 0.49
COMMD4-219ENST00000567399 RUFY2Q8WXA3 655 aa18.12■□□□□ 0.49
COMMD4-219ENST00000567399 EHD4Q9H223 541 aa18.12■□□□□ 0.49
COMMD4-219ENST00000567399 SNCAIPQ9Y6H5 919 aa18.12■□□□□ 0.49
COMMD4-219ENST00000567399 SREBF2Q12772 1141 aa18.11■□□□□ 0.49
COMMD4-219ENST00000567399 CTR9Q6PD62 1173 aa18.11■□□□□ 0.49
COMMD4-219ENST00000567399 STK11IPQ8N1F8 1099 aa18.11■□□□□ 0.49
COMMD4-219ENST00000567399 CDK5RAP2Q96SN8 1893 aa18.11■□□□□ 0.49
COMMD4-219ENST00000567399 MYH1P12882 1939 aa18.1■□□□□ 0.49
COMMD4-219ENST00000567399 FOCADQ5VW36 1801 aa18.1■□□□□ 0.49
COMMD4-219ENST00000567399 CCDC171Q6TFL3 1326 aa18.1■□□□□ 0.49
COMMD4-219ENST00000567399 CYP2D7A0A087X1C5 515 aa18.1■□□□□ 0.49
COMMD4-219ENST00000567399 MANSC4A6NHS7 340 aaPredicted RBP18.1■□□□□ 0.49
COMMD4-219ENST00000567399 SPDYE5A6NIY4 337 aa18.1■□□□□ 0.49
COMMD4-219ENST00000567399 CAP2P40123 477 aa18.1■□□□□ 0.49
COMMD4-219ENST00000567399 PPATQ06203 517 aa18.1■□□□□ 0.49
COMMD4-219ENST00000567399 CERKLQ49MI3 558 aaPredicted RBP18.1■□□□□ 0.49
COMMD4-219ENST00000567399 NOL9Q5SY16 702 aaKnown RBP18.1■□□□□ 0.49
COMMD4-219ENST00000567399 C12orf60Q5U649 245 aa18.1■□□□□ 0.49
COMMD4-219ENST00000567399 JMYQ8N9B5 988 aa18.1■□□□□ 0.49
COMMD4-219ENST00000567399 CNKSR2Q8WXI2 1034 aa18.1■□□□□ 0.49
COMMD4-219ENST00000567399 ZIC5Q96T25 663 aa18.1■□□□□ 0.49
COMMD4-219ENST00000567399 CABP5Q9NP86 173 aa18.1■□□□□ 0.49
COMMD4-219ENST00000567399 SWAP70Q9UH65 585 aa18.1■□□□□ 0.49
COMMD4-219ENST00000567399 ZHX2Q9Y6X8 837 aa18.1■□□□□ 0.49
COMMD4-219ENST00000567399 NAV1Q8NEY1 1877 aa18.09■□□□□ 0.49
COMMD4-219ENST00000567399 MPHOSPH10O00566 681 aaKnown RBP18.09■□□□□ 0.49
COMMD4-219ENST00000567399 GDF11O95390 407 aa18.09■□□□□ 0.49
COMMD4-219ENST00000567399 SLC3A2P08195 630 aaKnown RBP18.09■□□□□ 0.49
COMMD4-219ENST00000567399 GTF2A2P52657 109 aa18.09■□□□□ 0.49
COMMD4-219ENST00000567399 INHBEP58166 350 aa18.09■□□□□ 0.49
COMMD4-219ENST00000567399 PPIL2Q13356 520 aa18.09■□□□□ 0.49
COMMD4-219ENST00000567399 SBK1Q52WX2 424 aa18.09■□□□□ 0.49
COMMD4-219ENST00000567399 METTL16Q86W50 562 aaKnown RBP18.09■□□□□ 0.49
COMMD4-219ENST00000567399 DYNLL2Q96FJ2 89 aa18.09■□□□□ 0.49
COMMD4-219ENST00000567399 ASNSP08243 561 aa18.08■□□□□ 0.48
COMMD4-219ENST00000567399 DNAJC18Q9H819 358 aa18.08■□□□□ 0.48
COMMD4-219ENST00000567399 MKNK2Q9HBH9 465 aa18.08■□□□□ 0.48
COMMD4-219ENST00000567399 AS3MTQ9HBK9 375 aa18.08■□□□□ 0.48
COMMD4-219ENST00000567399 ZNF287Q9HBT7 754 aa18.08■□□□□ 0.48
COMMD4-219ENST00000567399 USP17L5A8MUK1 530 aa18.07■□□□□ 0.48
COMMD4-219ENST00000567399 PTPRAP18433 802 aa18.07■□□□□ 0.48
COMMD4-219ENST00000567399 CHMLP26374 656 aa18.07■□□□□ 0.48
COMMD4-219ENST00000567399 GJA5P36382 358 aa18.07■□□□□ 0.48
COMMD4-219ENST00000567399 SNAPC2Q13487 334 aa18.07■□□□□ 0.48
COMMD4-219ENST00000567399 ABCB5Q2M3G0 1257 aa18.07■□□□□ 0.48
COMMD4-219ENST00000567399 BMP2KLQ5H9B9 411 aa18.07■□□□□ 0.48
COMMD4-219ENST00000567399 VPS53Q5VIR6 699 aa18.07■□□□□ 0.48
COMMD4-219ENST00000567399 OTUD7BQ6GQQ9 843 aa18.07■□□□□ 0.48
COMMD4-219ENST00000567399 CASC1Q6TDU7 716 aa18.07■□□□□ 0.48
COMMD4-219ENST00000567399 ZNF589Q86UQ0 364 aaPredicted RBP18.07■□□□□ 0.48
COMMD4-219ENST00000567399 EPB41L4AQ9HCS5 686 aaPredicted RBP18.07■□□□□ 0.48
COMMD4-219ENST00000567399 TAOK2Q9UL54 1235 aa18.07■□□□□ 0.48
COMMD4-219ENST00000567399 IRF6O14896 467 aa18.06■□□□□ 0.48
COMMD4-219ENST00000567399 HSPD1P10809 573 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms