RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ABCC6O95255 1503 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 PSMA7O14818 248 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 PPP1R12BO60237 982 aaPredicted RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 MAP4K4O95819 1239 aaPredicted RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 CCDC89Q8N998 374 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 TRIM58Q8NG06 486 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 CCDC12Q8WUD4 166 aaPredicted RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 HOOK1Q9UJC3 728 aaKnown RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 FAM237AA0A1B0GTK4 181 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 ZNF189O75820 626 aaPredicted RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 EPB41P11171 864 aaKnown RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 SPDYE1Q8NFV5 336 aaPredicted RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 ZNF483Q8TF39 744 aaPredicted RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 NAT10Q9H0A0 1025 aaKnown RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 FAM114A2Q9NRY5 505 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 HELLSQ9NRZ9 838 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 RIMS1Q86UR5 1692 aaKnown RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 SHTN1A0MZ66 631 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 CTAGE15A4D2H0 777 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 CTAGE8P0CG41 777 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 PBX1P40424 430 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 KCNA1Q09470 495 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 CTAGE6Q86UF2 777 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 CTAGE4Q8IX94 777 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 TRIML1Q8N9V2 468 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 MARCH10Q8NA82 808 aaPredicted RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 NAPGQ99747 312 aaPredicted RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 RPGRIP1LQ68CZ1 1315 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 GOLGA8KD6RF30 607 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 BLVRAP53004 296 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 ACCSLQ4AC99 568 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 RHPN1Q8TCX5 695 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 LARP6Q9BRS8 491 aaKnown RBP3.28□□□□□ -1.88
CHD9-218ENST00000566029 ZNF287Q9HBT7 754 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 TAF6LQ9Y6J9 622 aa3.28□□□□□ -1.88
CHD9-218ENST00000566029 TARSL2A2RTX5 802 aaKnown RBP3.28□□□□□ -1.89
CHD9-218ENST00000566029 C5orf60A6NFR6 353 aa3.28□□□□□ -1.89
CHD9-218ENST00000566029 GOLGA6L10A6NI86 522 aa3.28□□□□□ -1.89
CHD9-218ENST00000566029 MFSD4BQ5TF39 518 aa3.28□□□□□ -1.89
CHD9-218ENST00000566029 KLHL23Q8NBE8 558 aa3.28□□□□□ -1.89
CHD9-218ENST00000566029 OVOS2A0A0G2JMS6 1433 aa3.28□□□□□ -1.89
CHD9-218ENST00000566029 OVOS2A0A0J9YW53 1432 aa3.28□□□□□ -1.89
CHD9-218ENST00000566029 ZFYVE9O95405 1425 aa3.28□□□□□ -1.89
CHD9-218ENST00000566029 OVOS2Q6IE36 1432 aa3.28□□□□□ -1.89
CHD9-218ENST00000566029 PHACTR2O75167 634 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 DNAJC8O75937 253 aaPredicted RBP3.27□□□□□ -1.89
CHD9-218ENST00000566029 ZNF76P36508 570 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 ARHGEF25Q86VW2 580 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 CLASRPQ8N2M8 674 aaKnown RBP3.27□□□□□ -1.89
CHD9-218ENST00000566029 UIMC1Q96RL1 719 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 TCEAL9Q9UHQ7 104 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 ODF2LQ9ULJ1 636 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 CHL1O00533 1208 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 NDC80O14777 642 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 ARL1P40616 181 aaPredicted RBP3.27□□□□□ -1.89
CHD9-218ENST00000566029 TTLL7Q6ZT98 887 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 FUKQ8N0W3 1084 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 MMGT1Q8N4V1 131 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 LMBR1Q8WVP7 490 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 ANLNQ9NQW6 1124 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 BATF3Q9NR55 127 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.27□□□□□ -1.892e-6■■■□□ 15.9
CHD9-218ENST00000566029 GLI2P10070 1586 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 NEURL4Q96JN8 1562 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 NUTM2FA1L443 756 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 GCKP35557 465 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 NUTM2GQ5VZR2 741 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 FNBP4Q8N3X1 1017 aaPredicted RBP3.27□□□□□ -1.89
CHD9-218ENST00000566029 FTOQ9C0B1 505 aaKnown RBP eCLIP3.27□□□□□ -1.89
CHD9-218ENST00000566029 CCT4P50991 539 aaKnown RBP3.27□□□□□ -1.89
CHD9-218ENST00000566029 DRAXINQ8NBI3 349 aaPredicted RBP3.27□□□□□ -1.89
CHD9-218ENST00000566029 C1orf131Q8NDD1 294 aaKnown RBP3.27□□□□□ -1.89
CHD9-218ENST00000566029 C15orf41Q9Y2V0 281 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 H0YC42 278 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 MAFGO15525 162 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 PEX19P40855 299 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 TPD52P55327 224 aaPredicted RBP3.27□□□□□ -1.89
CHD9-218ENST00000566029 RIPK1Q13546 671 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 FAM228AQ86W67 206 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 PARP9Q8IXQ6 854 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 GOLGA6L10A0A0M3HER8 536 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 CCNI2Q6ZMN8 369 aaPredicted RBP3.27□□□□□ -1.89
CHD9-218ENST00000566029 B4GALNT4Q76KP1 1039 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 COG1Q8WTW3 980 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 SAAL1Q96ER3 474 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 ACSBG1Q96GR2 724 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 NUB1Q9Y5A7 615 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 MYOM1P52179 1685 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 LMTK2Q8IWU2 1503 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 ATP2B2Q01814 1243 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 MCM6Q14566 821 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 KDM7AQ6ZMT4 941 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 MFN1Q8IWA4 741 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 ZC3H15Q8WU90 426 aaKnown RBP3.27□□□□□ -1.89
CHD9-218ENST00000566029 SPDYE3A6NKU9 549 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 GHRP10912 638 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 CCT2P78371 535 aaKnown RBP3.27□□□□□ -1.89
CHD9-218ENST00000566029 PDCLQ13371 301 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 BLMHQ13867 455 aa3.27□□□□□ -1.89
CHD9-218ENST00000566029 MIS18BP1Q6P0N0 1132 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms