RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 ITKQ08881 620 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 WASHC5Q12768 1159 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 IFRD2Q12894 506 aaPredicted RBP3.63□□□□□ -1.83
CHD9-216ENST00000565803 NCOA4Q13772 614 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 PLCB4Q15147 1175 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 PCGF5Q86SE9 256 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 MCF2L2Q86YR7 1114 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 RELL1Q8IUW5 271 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 GOLGA6L1Q8N7Z2 621 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 SMC1BQ8NDV3 1235 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 PPHLN1Q8NEY8 458 aaKnown RBP3.63□□□□□ -1.83
CHD9-216ENST00000565803 CCT6BQ92526 530 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 DNAI2Q9GZS0 605 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 KANSL2Q9H9L4 492 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 CD248Q9HCU0 757 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 TAGLN3Q9UI15 199 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 KDM3BQ7LBC6 1761 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 COL5A3P25940 1745 aaPredicted RBP3.63□□□□□ -1.83
CHD9-216ENST00000565803 PRSS47A8MTI9 375 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 IPO8O15397 1037 aaKnown RBP3.63□□□□□ -1.83
CHD9-216ENST00000565803 OAS2P29728 719 aaKnown RBP3.63□□□□□ -1.83
CHD9-216ENST00000565803 MAP2K1Q02750 393 aaPredicted RBP3.63□□□□□ -1.83
CHD9-216ENST00000565803 RASSF7Q02833 373 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 PPP2R5CQ13362 524 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 SAMD3Q8N6K7 520 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 KCNK17Q96T54 332 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 BRINP2Q9C0B6 783 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 WBP1LQ9NX94 342 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.63□□□□□ -1.83
CHD9-216ENST00000565803 ABCF2Q9UG63 623 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 ZNF652Q9Y2D9 606 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 ATP8A1Q9Y2Q0 1164 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 AFG3L2Q9Y4W6 797 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 DDX11L8A8MPP1 907 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 VGLL3A8MV65 326 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 F6X3S4 739 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 ELL2O00472 640 aaPredicted RBP3.63□□□□□ -1.83
CHD9-216ENST00000565803 NDUFB5O43674 189 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 ACTN4O43707 911 aaKnown RBP3.63□□□□□ -1.83
CHD9-216ENST00000565803 ICMTO60725 284 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 KATNA1O75449 491 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 FAM200BP0CF97 657 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 HSPA8P11142 646 aaKnown RBP3.63□□□□□ -1.83
CHD9-216ENST00000565803 MYCLP1P12525 358 aaPredicted RBP3.63□□□□□ -1.83
CHD9-216ENST00000565803 NFKB2Q00653 900 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 KCNH2Q12809 1159 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 BRDTQ58F21 947 aaPredicted RBP3.63□□□□□ -1.83
CHD9-216ENST00000565803 FBXW10Q5XX13 1052 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 ZCCHC8Q6NZY4 707 aaKnown RBP3.63□□□□□ -1.83
CHD9-216ENST00000565803 ANKS3Q6ZW76 656 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 EPS8L1Q8TE68 723 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 DEPDC7Q96QD5 511 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 STK32BQ9NY57 414 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 GTF2A1LQ9UNN4 478 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 ADGRB1O14514 1584 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 ROCK1Q13464 1354 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 C21orf2O43822 256 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 TMEM127O75204 238 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 NR1I2O75469 434 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 NOS2P35228 1153 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 KRT20P35900 424 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 FKBP4Q02790 459 aaKnown RBP eCLIP3.62□□□□□ -1.83
CHD9-216ENST00000565803 MRPL58Q14197 206 aaKnown RBP3.62□□□□□ -1.83
CHD9-216ENST00000565803 ALFQ53S48 1182 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 C1QTNF12Q5T7M4 302 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 KANK4Q5T7N3 995 aaPredicted RBP3.62□□□□□ -1.83
CHD9-216ENST00000565803 DUSP27Q5VZP5 1158 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 WWC2Q6AWC2 1192 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 C16orf87Q6PH81 154 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 ERP27Q96DN0 273 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 VMP1Q96GC9 406 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 CDK5RAP3Q96JB5 506 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 LRGUKQ96M69 825 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 SRRTQ9BXP5 876 aaKnown RBP3.62□□□□□ -1.83
CHD9-216ENST00000565803 AP1M1Q9BXS5 423 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 RABL2AQ9UBK7 228 aaPredicted RBP3.62□□□□□ -1.83
CHD9-216ENST00000565803 IKBKGQ9Y6K9 419 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 DIAPH1O60610 1272 aaKnown RBP3.62□□□□□ -1.83
CHD9-216ENST00000565803 FOSL1P15407 271 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 EPB42P16452 691 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 RBL2Q08999 1139 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 TCIRG1Q13488 830 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 PUM3Q15397 648 aaKnown RBP3.62□□□□□ -1.83
CHD9-216ENST00000565803 INO80DQ53TQ3 878 aaPredicted RBP3.62□□□□□ -1.83
CHD9-216ENST00000565803 SLC27A3Q5K4L6 730 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 SHQ1Q6PI26 577 aaKnown RBP3.62□□□□□ -1.83
CHD9-216ENST00000565803 FAM47EQ6ZV65 393 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 WAPLQ7Z5K2 1190 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 LMNTD2Q8IXW0 634 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 OGFOD1Q8N543 542 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 IWS1Q96ST2 819 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 SETDB2Q96T68 719 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 APBA2Q99767 749 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 MUC3BQ9H195 1237 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 C9orf78Q9NZ63 289 aaPredicted RBP3.62□□□□□ -1.83
CHD9-216ENST00000565803 EMILIN1Q9Y6C2 1016 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 DOT1LQ8TEK3 1739 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 POLR3AO14802 1390 aaPredicted RBP3.62□□□□□ -1.83
CHD9-216ENST00000565803 FER1L6Q2WGJ9 1857 aa3.62□□□□□ -1.83
CHD9-216ENST00000565803 FAM221BA6H8Z2 402 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms