RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 A0A0G2JLL6 359 aaPredicted RBP20.31■□□□□ 0.84
USB1-211ENST00000565662 PABPC4Q13310 644 aaKnown RBP eCLIP20.31■□□□□ 0.84
USB1-211ENST00000565662 AAMPQ13685 434 aa20.31■□□□□ 0.84
USB1-211ENST00000565662 OTOP1Q7RTM1 612 aa20.31■□□□□ 0.84
USB1-211ENST00000565662 PRRT2Q7Z6L0 340 aaPredicted RBP20.31■□□□□ 0.84
USB1-211ENST00000565662 PIH1D3Q9NQM4 214 aaKnown RBP20.31■□□□□ 0.84
USB1-211ENST00000565662 PNMA3Q9UL41 463 aa20.31■□□□□ 0.84
USB1-211ENST00000565662 ZHX2Q9Y6X8 837 aa20.31■□□□□ 0.84
USB1-211ENST00000565662 PTPRFP10586 1907 aa20.31■□□□□ 0.84
USB1-211ENST00000565662 ASNSP08243 561 aa20.3■□□□□ 0.84
USB1-211ENST00000565662 METTL16Q86W50 562 aaKnown RBP20.3■□□□□ 0.84
USB1-211ENST00000565662 SIRT2Q8IXJ6 389 aa20.3■□□□□ 0.84
USB1-211ENST00000565662 CRACR2BQ8N4Y2 399 aaPredicted RBP20.3■□□□□ 0.84
USB1-211ENST00000565662 MAGEB6Q8N7X4 407 aa20.3■□□□□ 0.84
USB1-211ENST00000565662 PROCA1Q8NCQ7 364 aaPredicted RBP20.3■□□□□ 0.84
USB1-211ENST00000565662 PHIPQ8WWQ0 1821 aa20.3■□□□□ 0.84
USB1-211ENST00000565662 ATP5JP18859 108 aa20.29■□□□□ 0.84
USB1-211ENST00000565662 CAP2P40123 477 aa20.29■□□□□ 0.84
USB1-211ENST00000565662 USP5P45974 858 aa20.29■□□□□ 0.84
USB1-211ENST00000565662 MLLT1Q03111 559 aaPredicted RBP20.29■□□□□ 0.84
USB1-211ENST00000565662 ZSCAN25Q6NSZ9 544 aa20.29■□□□□ 0.84
USB1-211ENST00000565662 TTC6Q86TZ1 520 aa20.29■□□□□ 0.84
USB1-211ENST00000565662 TGFBRAP1Q8WUH2 860 aa20.29■□□□□ 0.84
USB1-211ENST00000565662 R3HDMLQ9H3Y0 253 aa20.29■□□□□ 0.84
USB1-211ENST00000565662 AFG3L2Q9Y4W6 797 aa20.29■□□□□ 0.84
USB1-211ENST00000565662 MYH1P12882 1939 aa20.29■□□□□ 0.84
USB1-211ENST00000565662 PDHXO00330 501 aa20.28■□□□□ 0.84
USB1-211ENST00000565662 HOXD10P28358 340 aa20.28■□□□□ 0.84
USB1-211ENST00000565662 CD99L2Q8TCZ2 262 aa20.28■□□□□ 0.84
USB1-211ENST00000565662 CRNKL1Q9BZJ0 848 aaKnown RBP20.28■□□□□ 0.84
USB1-211ENST00000565662 EHD4Q9H223 541 aa20.28■□□□□ 0.84
USB1-211ENST00000565662 LOC285556D6RIA3 1793 aa20.27■□□□□ 0.84
USB1-211ENST00000565662 USP17L5A8MUK1 530 aa20.27■□□□□ 0.84
USB1-211ENST00000565662 APBB1O00213 710 aa20.27■□□□□ 0.84
USB1-211ENST00000565662 LRRFIP1Q32MZ4 808 aaKnown RBP20.27■□□□□ 0.84
USB1-211ENST00000565662 NBPF11Q86T75 865 aa20.27■□□□□ 0.84
USB1-211ENST00000565662 PTPN22Q9Y2R2 807 aa20.27■□□□□ 0.84
USB1-211ENST00000565662 MYH7P12883 1935 aa20.27■□□□□ 0.84
USB1-211ENST00000565662 RRP1P56182 461 aaKnown RBP20.26■□□□□ 0.83
USB1-211ENST00000565662 LACTBP83111 547 aaPredicted RBP20.26■□□□□ 0.83
USB1-211ENST00000565662 SLC9C2Q5TAH2 1124 aa20.26■□□□□ 0.83
USB1-211ENST00000565662 MAPKAPK5Q8IW41 473 aa20.26■□□□□ 0.83
USB1-211ENST00000565662 ZNF280CQ8ND82 737 aa20.26■□□□□ 0.83
USB1-211ENST00000565662 DNAJC2Q99543 621 aaKnown RBP20.26■□□□□ 0.83
USB1-211ENST00000565662 PAG1Q9NWQ8 432 aa20.26■□□□□ 0.83
USB1-211ENST00000565662 AGTPBP1Q9UPW5 1226 aa20.26■□□□□ 0.83
USB1-211ENST00000565662 NAV1Q8NEY1 1877 aa20.26■□□□□ 0.83
USB1-211ENST00000565662 SIPA1L1O43166 1804 aa20.25■□□□□ 0.83
USB1-211ENST00000565662 MAGEB6P1A0A0J9YX57 407 aa20.25■□□□□ 0.83
USB1-211ENST00000565662 C20orf194Q5TEA3 1177 aa20.25■□□□□ 0.83
USB1-211ENST00000565662 C17orf99Q6UX52 265 aa20.25■□□□□ 0.83
USB1-211ENST00000565662 ADGRA1Q86SQ6 560 aa20.25■□□□□ 0.83
USB1-211ENST00000565662 AMOTL1Q8IY63 956 aa20.25■□□□□ 0.83
USB1-211ENST00000565662 DDRGK1Q96HY6 314 aa20.25■□□□□ 0.83
USB1-211ENST00000565662 HAUS7Q99871 368 aa20.25■□□□□ 0.83
USB1-211ENST00000565662 DCTPP1Q9H773 170 aa20.25■□□□□ 0.83
USB1-211ENST00000565662 DDX60LQ5H9U9 1706 aaKnown RBP20.24■□□□□ 0.83
USB1-211ENST00000565662 RBBP6Q7Z6E9 1792 aaKnown RBP20.24■□□□□ 0.83
USB1-211ENST00000565662 GOLIM4O00461 696 aa20.24■□□□□ 0.83
USB1-211ENST00000565662 PDE6AP16499 860 aa20.24■□□□□ 0.83
USB1-211ENST00000565662 GADL1Q6ZQY3 521 aa20.24■□□□□ 0.83
USB1-211ENST00000565662 SMCR8Q8TEV9 937 aaPredicted RBP20.24■□□□□ 0.83
USB1-211ENST00000565662 WDR18Q9BV38 432 aa20.24■□□□□ 0.83
USB1-211ENST00000565662 ZBTB47Q9UFB7 747 aaPredicted RBP20.24■□□□□ 0.83
USB1-211ENST00000565662 SERPINB13Q9UIV8 391 aa20.24■□□□□ 0.83
USB1-211ENST00000565662 TRIM75PA6NK02 468 aa20.23■□□□□ 0.83
USB1-211ENST00000565662 C19orf81C9J6K1 198 aa20.23■□□□□ 0.83
USB1-211ENST00000565662 MOGSQ13724 837 aa20.23■□□□□ 0.83
USB1-211ENST00000565662 SH3D19Q5HYK7 790 aa20.23■□□□□ 0.83
USB1-211ENST00000565662 MIGA1Q8NAN2 632 aa20.23■□□□□ 0.83
USB1-211ENST00000565662 ANTXR1Q9H6X2 564 aa20.23■□□□□ 0.83
USB1-211ENST00000565662 ADGRA2Q96PE1 1338 aa20.23■□□□□ 0.83
USB1-211ENST00000565662 GCLCP48506 637 aaPredicted RBP20.22■□□□□ 0.83
USB1-211ENST00000565662 GTF3C2Q8WUA4 911 aaPredicted RBP20.22■□□□□ 0.83
USB1-211ENST00000565662 ARMC5Q96C12 935 aa20.22■□□□□ 0.83
USB1-211ENST00000565662 RIOK1Q9BRS2 568 aaKnown RBP20.22■□□□□ 0.83
USB1-211ENST00000565662 ECHDC1Q9NTX5 307 aa20.22■□□□□ 0.83
USB1-211ENST00000565662 TMOD4Q9NZQ9 345 aa20.22■□□□□ 0.83
USB1-211ENST00000565662 ERC2O15083 957 aa20.21■□□□□ 0.83
USB1-211ENST00000565662 OSBPP22059 807 aa20.21■□□□□ 0.83
USB1-211ENST00000565662 FCGRTP55899 365 aa20.21■□□□□ 0.83
USB1-211ENST00000565662 DYNLL1P63167 89 aaKnown RBP20.21■□□□□ 0.83
USB1-211ENST00000565662 UBE3CQ15386 1083 aa20.21■□□□□ 0.83
USB1-211ENST00000565662 GPAT2Q6NUI2 795 aa20.21■□□□□ 0.83
USB1-211ENST00000565662 ATP8A2Q9NTI2 1148 aa20.21■□□□□ 0.83
USB1-211ENST00000565662 PALD1Q9ULE6 856 aa20.21■□□□□ 0.83
USB1-211ENST00000565662 ZNF532Q9HCE3 1301 aa20.21■□□□□ 0.83
USB1-211ENST00000565662 SLC9C1Q4G0N8 1177 aa20.2■□□□□ 0.82
USB1-211ENST00000565662 BOLA2Q9H3K6 86 aa20.2■□□□□ 0.82
USB1-211ENST00000565662 CABP5Q9NP86 173 aa20.2■□□□□ 0.82
USB1-211ENST00000565662 TTC41PQ6P2S7 1318 aa20.2■□□□□ 0.82
USB1-211ENST00000565662 USP17L10C9JJH3 530 aa20.19■□□□□ 0.82
USB1-211ENST00000565662 POLR3DP05423 398 aaPredicted RBP20.19■□□□□ 0.82
USB1-211ENST00000565662 ZFYP08048 801 aaPredicted RBP20.19■□□□□ 0.82
USB1-211ENST00000565662 BCRP11274 1271 aa20.19■□□□□ 0.82
USB1-211ENST00000565662 CAPN2P17655 700 aa20.19■□□□□ 0.82
USB1-211ENST00000565662 ADD2P35612 726 aa20.19■□□□□ 0.82
USB1-211ENST00000565662 USP14P54578 494 aa20.19■□□□□ 0.82
USB1-211ENST00000565662 BACE1P56817 501 aa20.19■□□□□ 0.82
USB1-211ENST00000565662 SPP2Q13103 211 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms