RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 NACAP1Q9BZK3 213 aa8.46□□□□□ -1.06
HERPUD1-209ENST00000564678 CNNM2Q9H8M5 875 aa8.46□□□□□ -1.06
HERPUD1-209ENST00000564678 WWC3Q9ULE0 1092 aa8.46□□□□□ -1.06
HERPUD1-209ENST00000564678 ANGEL1Q9UNK9 670 aaKnown RBP8.46□□□□□ -1.06
HERPUD1-209ENST00000564678 ZNF804BA4D1E1 1349 aa8.46□□□□□ -1.06
HERPUD1-209ENST00000564678 KLF18A0A0U1RQI7 1052 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 UBAP1LF5GYI3 381 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 DTNBO60941 627 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 CCDC192P0DO97 292 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 BCAMP50895 628 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 ANTXR2P58335 489 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 FAM173BQ6P4H8 233 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 REM2Q8IYK8 340 aaPredicted RBP8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 IFNL3Q8IZI9 196 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 MAGEB6Q8N7X4 407 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 PXYLP1Q8TE99 480 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 DHX38Q92620 1227 aaKnown RBP8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 CARMIL3Q8ND23 1372 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 CPLX1O14810 134 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 CDKL5O76039 1030 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 FDPSP14324 419 aaKnown RBP8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 GTF2E1P29083 439 aaPredicted RBP8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 ADD1P35611 737 aaKnown RBP8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 LIFRP42702 1097 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 MAP3K11Q16584 847 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 ERFEQ4G0M1 354 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 CAVIN4Q5BKX8 364 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 CPLX2Q6PUV4 134 aaKnown RBP8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 RBM43Q6ZSC3 357 aaKnown RBP8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 SGMS1Q86VZ5 419 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 KRT23Q9C075 422 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 NAPBQ9H115 298 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 NUP62CLQ9H1M0 184 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 NCOA5Q9HCD5 579 aaKnown RBP8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 NAP1L2Q9ULW6 460 aaPredicted RBP8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 HPS5Q9UPZ3 1129 aa8.45□□□□□ -1.06
HERPUD1-209ENST00000564678 DIXDC1Q155Q3 683 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 TPTE2Q6XPS3 522 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 BRAPQ7Z569 592 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 TMTC2Q8N394 836 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 LARGE2Q8N3Y3 721 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 RNF214Q8ND24 703 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 FBXO18Q8NFZ0 1043 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 PIK3R5Q8WYR1 880 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 NLRP3Q96P20 1036 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 SETDB2Q96T68 719 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 TANGO6Q9C0B7 1094 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 NBPF3Q9H094 633 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 LRP2BPQ9P2M1 347 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 USP21Q9UK80 565 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 DENND2AQ9ULE3 1009 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 NOL7Q9UMY1 257 aaKnown RBP8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 GOLGA8BA8MQT2 603 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 GSG1L2A8MUP6 293 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 SH2B2O14492 632 aaPredicted RBP8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 ZPR1O75312 459 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 MBD4O95243 580 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 CAVIN2O95810 425 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 ELOAQ14241 798 aaKnown RBP8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 AKNAD1Q5T1N1 836 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 TBC1D10CQ8IV04 446 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 IGDCC4Q8TDY8 1250 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 PGBD1Q96JS3 809 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 C8orf76Q96K31 380 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 RNF41Q9H4P4 317 aaPredicted RBP8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 BCL2L12Q9HB09 334 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 DACT1Q9NYF0 836 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 ORC3Q9UBD5 711 aaPredicted RBP8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 CCDC39Q9UFE4 941 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 MINPP1Q9UNW1 487 aa8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 RTCBQ9Y3I0 505 aaKnown RBP8.44□□□□□ -1.06
HERPUD1-209ENST00000564678 MYH15Q9Y2K3 1946 aa8.43□□□□□ -1.06
HERPUD1-209ENST00000564678 PDS5AQ29RF7 1337 aaKnown RBP8.43□□□□□ -1.06
HERPUD1-209ENST00000564678 SNAP23O00161 211 aa8.43□□□□□ -1.06
HERPUD1-209ENST00000564678 CTAGE5O15320 804 aa8.43□□□□□ -1.06
HERPUD1-209ENST00000564678 ATP9BO43861 1147 aa8.43□□□□□ -1.06
HERPUD1-209ENST00000564678 LIG1P18858 919 aa8.43□□□□□ -1.06
HERPUD1-209ENST00000564678 MSNP26038 577 aaKnown RBP8.43□□□□□ -1.06
HERPUD1-209ENST00000564678 RCAN1P53805 252 aa8.43□□□□□ -1.06
HERPUD1-209ENST00000564678 RPS8P62241 208 aaKnown RBP8.43□□□□□ -1.06
HERPUD1-209ENST00000564678 RAD51AP2Q09MP3 1159 aa8.43□□□□□ -1.06
HERPUD1-209ENST00000564678 TBC1D9BQ66K14 1250 aa8.43□□□□□ -1.06
HERPUD1-209ENST00000564678 MFSD6Q6ZSS7 791 aa8.43□□□□□ -1.06
HERPUD1-209ENST00000564678 STAG1Q8WVM7 1258 aa8.43□□□□□ -1.06
HERPUD1-209ENST00000564678 ANKRD2Q9GZV1 360 aa8.43□□□□□ -1.06
HERPUD1-209ENST00000564678 TNMDQ9H2S6 317 aa8.43□□□□□ -1.06
HERPUD1-209ENST00000564678 CLSTN2Q9H4D0 955 aa8.43□□□□□ -1.06
HERPUD1-209ENST00000564678 EPB41L4AQ9HCS5 686 aaPredicted RBP8.43□□□□□ -1.06
HERPUD1-209ENST00000564678 RTEL1Q9NZ71 1219 aa8.43□□□□□ -1.06
HERPUD1-209ENST00000564678 SCN7AQ01118 1682 aa8.43□□□□□ -1.06
HERPUD1-209ENST00000564678 PIK3CDO00329 1044 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 METAP2P50579 478 aaKnown RBP eCLIP8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 CTDSPL2Q05D32 466 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 SART3Q15020 963 aaKnown RBP8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 APOA5Q6Q788 366 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 CYB5R4Q7L1T6 521 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 MICALL2Q8IY33 904 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 BICD2Q8TD16 824 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 NHSQ6T4R5 1651 aa8.42□□□□□ -1.06
HERPUD1-209ENST00000564678 THSD7AQ9UPZ6 1657 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms