RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 EIF6P56537 245 aaKnown RBP7.28□□□□□ -1.24
CDH13-206ENST00000562601 IFIT5Q13325 482 aaKnown RBP7.28□□□□□ -1.24
CDH13-206ENST00000562601 TAF7LQ5H9L4 462 aa7.28□□□□□ -1.24
CDH13-206ENST00000562601 RNF135Q8IUD6 432 aa7.28□□□□□ -1.24
CDH13-206ENST00000562601 C16orf71Q8IYS4 520 aaPredicted RBP7.28□□□□□ -1.24
CDH13-206ENST00000562601 ANKRD44Q8N8A2 993 aa7.28□□□□□ -1.24
CDH13-206ENST00000562601 SUPT20HQ8NEM7 779 aa7.28□□□□□ -1.24
CDH13-206ENST00000562601 MPHOSPH8Q99549 860 aa7.28□□□□□ -1.24
CDH13-206ENST00000562601 PUS3Q9BZE2 481 aaKnown RBP7.28□□□□□ -1.24
CDH13-206ENST00000562601 DBNDD1Q9H9R9 158 aa7.28□□□□□ -1.24
CDH13-206ENST00000562601 BSDC1Q9NW68 430 aaPredicted RBP7.28□□□□□ -1.24
CDH13-206ENST00000562601 GGA1Q9UJY5 639 aa7.28□□□□□ -1.24
CDH13-206ENST00000562601 PCDHB11Q9Y5F2 797 aa7.28□□□□□ -1.24
CDH13-206ENST00000562601 UTYO14607 1347 aa7.27□□□□□ -1.24
CDH13-206ENST00000562601 WDR90Q96KV7 1748 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 YDJCA8MPS7 323 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 SNAP23O00161 211 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 IPO8O15397 1037 aaKnown RBP7.27□□□□□ -1.25
CDH13-206ENST00000562601 MYCP01106 439 aaPredicted RBP7.27□□□□□ -1.25
CDH13-206ENST00000562601 BMP2P12643 396 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 C1QTNF8P60827 252 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 CHRNDQ07001 517 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 CXCL9Q07325 125 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 KIAA2012Q0VF49 1180 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 CCDC57Q2TAC2 916 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 ATF7IPQ6VMQ6 1270 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 KLHDC4Q8TBB5 520 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 ARHGAP45Q92619 1136 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 PURBQ96QR8 312 aaKnown RBP7.27□□□□□ -1.25
CDH13-206ENST00000562601 MEIS3Q99687 375 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 CYLDQ9NQC7 956 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 PODXL2Q9NZ53 605 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 ZNRF3Q9ULT6 936 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 RTL9Q8NET4 1388 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 A0A1B0GUL6 1792 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 XDHP47989 1333 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 KIF16BQ96L93 1317 aa7.27□□□□□ -1.25
CDH13-206ENST00000562601 SCN9AQ15858 1988 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 ECE2O60344 883 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 LILRA1O75019 489 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 ADH1AP07327 375 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 UBTFL1P0CB47 393 aaPredicted RBP7.26□□□□□ -1.25
CDH13-206ENST00000562601 VEGFAP15692 232 aaPredicted RBP7.26□□□□□ -1.25
CDH13-206ENST00000562601 ATP2B4P23634 1241 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 KLRK1P26718 216 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 ERVK-9P63128 1117 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 CBLBQ13191 982 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 MAP7D1Q3KQU3 841 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 ZKSCAN2Q63HK3 967 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 LDHAL6AQ6ZMR3 332 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 TXNRD3Q86VQ6 643 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 GPC2Q8N158 579 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 TMEM57Q8N5G2 664 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 ZFP42Q96MM3 310 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 EYA3Q99504 573 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 ZC3H12CQ9C0D7 883 aaKnown RBP7.26□□□□□ -1.25
CDH13-206ENST00000562601 ALG2Q9H553 416 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 CNNM1Q9NRU3 951 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 DOLKQ9UPQ8 538 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 LRRFIP2Q9Y608 721 aaKnown RBP7.26□□□□□ -1.25
CDH13-206ENST00000562601 SCN4AP35499 1836 aa7.26□□□□□ -1.25
CDH13-206ENST00000562601 SHTN1A0MZ66 631 aa7.25□□□□□ -1.25
CDH13-206ENST00000562601 PSMD14O00487 310 aa7.25□□□□□ -1.25
CDH13-206ENST00000562601 TOMM70O94826 608 aa7.25□□□□□ -1.25
CDH13-206ENST00000562601 RLBP1P12271 317 aa7.25□□□□□ -1.25
CDH13-206ENST00000562601 EPS15P42566 896 aa7.25□□□□□ -1.25
CDH13-206ENST00000562601 KCNJ4P48050 445 aa7.25□□□□□ -1.25
CDH13-206ENST00000562601 GMPSP49915 693 aaPredicted RBP7.25□□□□□ -1.25
CDH13-206ENST00000562601 LRRC24Q50LG9 513 aa7.25□□□□□ -1.25
CDH13-206ENST00000562601 EAPPQ56P03 285 aaPredicted RBP7.25□□□□□ -1.25
CDH13-206ENST00000562601 C6orf118Q5T5N4 469 aa7.25□□□□□ -1.25
CDH13-206ENST00000562601 INTS3Q68E01 1043 aaKnown RBP7.25□□□□□ -1.25
CDH13-206ENST00000562601 CIAPIN1Q6FI81 312 aa7.25□□□□□ -1.25
CDH13-206ENST00000562601 CYP2U1Q7Z449 544 aa7.25□□□□□ -1.25
CDH13-206ENST00000562601 PANK1Q8TE04 598 aa7.25□□□□□ -1.25
CDH13-206ENST00000562601 ANKRD2Q9GZV1 360 aa7.25□□□□□ -1.25
CDH13-206ENST00000562601 VPS33BQ9H267 617 aa7.25□□□□□ -1.25
CDH13-206ENST00000562601 ZNF804BA4D1E1 1349 aa7.25□□□□□ -1.25
CDH13-206ENST00000562601 SCNN1DP51172 638 aa7.24□□□□□ -1.25
CDH13-206ENST00000562601 USP4Q13107 963 aa7.24□□□□□ -1.25
CDH13-206ENST00000562601 RABL6Q3YEC7 729 aaPredicted RBP7.24□□□□□ -1.25
CDH13-206ENST00000562601 ITPRIPQ8IWB1 547 aa7.24□□□□□ -1.25
CDH13-206ENST00000562601 FTSJ3Q8IY81 847 aaKnown RBP7.24□□□□□ -1.25
CDH13-206ENST00000562601 DZIP1LQ8IYY4 767 aaKnown RBP7.24□□□□□ -1.25
CDH13-206ENST00000562601 PHTF2Q8N3S3 785 aa7.24□□□□□ -1.25
CDH13-206ENST00000562601 MXD3Q9BW11 206 aa7.24□□□□□ -1.25
CDH13-206ENST00000562601 SIL1Q9H173 461 aa7.24□□□□□ -1.25
CDH13-206ENST00000562601 TAF1DQ9H5J8 278 aaPredicted RBP7.24□□□□□ -1.25
CDH13-206ENST00000562601 C1orf115Q9H7X2 142 aa7.24□□□□□ -1.25
CDH13-206ENST00000562601 HACL1Q9UJ83 578 aa7.24□□□□□ -1.25
CDH13-206ENST00000562601 RCAN3Q9UKA8 241 aa7.24□□□□□ -1.25
CDH13-206ENST00000562601 POLR2AP24928 1970 aaKnown RBP7.23□□□□□ -1.25
CDH13-206ENST00000562601 IQCA1LA6NCM1 817 aa7.23□□□□□ -1.25
CDH13-206ENST00000562601 SPINT1O43278 529 aa7.23□□□□□ -1.25
CDH13-206ENST00000562601 GNAI3P08754 354 aa7.23□□□□□ -1.25
CDH13-206ENST00000562601 LMOD1P29536 600 aaPredicted RBP7.23□□□□□ -1.25
CDH13-206ENST00000562601 EPHX2P34913 555 aa7.23□□□□□ -1.25
CDH13-206ENST00000562601 RFX5P48382 616 aaPredicted RBP7.23□□□□□ -1.25
CDH13-206ENST00000562601 HTRA3P83110 453 aa7.23□□□□□ -1.25
CDH13-206ENST00000562601 TNIP1Q15025 636 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms