RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 SLC4A4Q9Y6R1 1079 aa28.15■■■□□ 2.1
SMPD3-202ENST00000561749 PHF20L1A8MW92 1017 aa28.14■■■□□ 2.1
SMPD3-202ENST00000561749 HLA-DOAP06340 250 aa28.14■■■□□ 2.1
SMPD3-202ENST00000561749 GJA5P36382 358 aa28.14■■■□□ 2.1
SMPD3-202ENST00000561749 MAP3K10Q02779 954 aa28.14■■■□□ 2.1
SMPD3-202ENST00000561749 OPTNQ96CV9 577 aa28.14■■■□□ 2.1
SMPD3-202ENST00000561749 DCP1AQ9NPI6 582 aaPredicted RBP28.14■■■□□ 2.1
SMPD3-202ENST00000561749 MCM9Q9NXL9 1143 aa28.14■■■□□ 2.1
SMPD3-202ENST00000561749 ZMYM1Q5SVZ6 1142 aa28.13■■■□□ 2.09
SMPD3-202ENST00000561749 SKAP1Q86WV1 359 aa28.13■■■□□ 2.09
SMPD3-202ENST00000561749 STRBPQ96SI9 672 aaKnown RBP28.13■■■□□ 2.09
SMPD3-202ENST00000561749 LAMB1P07942 1786 aa28.13■■■□□ 2.09
SMPD3-202ENST00000561749 GPAA1O43292 621 aa28.12■■■□□ 2.09
SMPD3-202ENST00000561749 TBC1D12O60347 775 aa28.12■■■□□ 2.09
SMPD3-202ENST00000561749 POLR3DP05423 398 aaPredicted RBP28.12■■■□□ 2.09
SMPD3-202ENST00000561749 HSPA1AP0DMV8 641 aaKnown RBP28.12■■■□□ 2.09
SMPD3-202ENST00000561749 HSPA1BP0DMV9 641 aaKnown RBP28.12■■■□□ 2.09
SMPD3-202ENST00000561749 EVX2Q03828 476 aa28.12■■■□□ 2.09
SMPD3-202ENST00000561749 CRACR2BQ8N4Y2 399 aaPredicted RBP28.12■■■□□ 2.09
SMPD3-202ENST00000561749 OTUD5Q96G74 571 aa28.12■■■□□ 2.09
SMPD3-202ENST00000561749 TRIM34Q9BYJ4 488 aa28.12■■■□□ 2.09
SMPD3-202ENST00000561749 CYP2D6P10635 497 aa28.11■■■□□ 2.09
SMPD3-202ENST00000561749 TTC22Q5TAA0 569 aa28.11■■■□□ 2.09
SMPD3-202ENST00000561749 DNAJC18Q9H819 358 aa28.11■■■□□ 2.09
SMPD3-202ENST00000561749 MYH8P13535 1937 aa28.11■■■□□ 2.09
SMPD3-202ENST00000561749 PLCD1P51178 756 aa28.1■■■□□ 2.09
SMPD3-202ENST00000561749 MAP2K1Q02750 393 aaPredicted RBP28.1■■■□□ 2.09
SMPD3-202ENST00000561749 CCDC129Q6ZRS4 1044 aa28.1■■■□□ 2.09
SMPD3-202ENST00000561749 ATP8A2Q9NTI2 1148 aa28.1■■■□□ 2.09
SMPD3-202ENST00000561749 HERC5Q9UII4 1024 aaKnown RBP28.1■■■□□ 2.09
SMPD3-202ENST00000561749 PHIPQ8WWQ0 1821 aa28.09■■■□□ 2.09
SMPD3-202ENST00000561749 SPDYE5A6NIY4 337 aa28.09■■■□□ 2.09
SMPD3-202ENST00000561749 ZBTB48P10074 688 aaPredicted RBP28.09■■■□□ 2.09
SMPD3-202ENST00000561749 GSPT1P15170 499 aaKnown RBP28.09■■■□□ 2.09
SMPD3-202ENST00000561749 RRP1BQ14684 758 aaKnown RBP28.09■■■□□ 2.09
SMPD3-202ENST00000561749 NOL9Q5SY16 702 aaKnown RBP28.09■■■□□ 2.09
SMPD3-202ENST00000561749 TTC6Q86TZ1 520 aa28.09■■■□□ 2.09
SMPD3-202ENST00000561749 FOXP4Q8IVH2 680 aaPredicted RBP28.09■■■□□ 2.09
SMPD3-202ENST00000561749 FAM227BQ96M60 508 aa28.09■■■□□ 2.09
SMPD3-202ENST00000561749 WBP1LQ9NX94 342 aa28.09■■■□□ 2.09
SMPD3-202ENST00000561749 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.09■■■□□ 2.09
SMPD3-202ENST00000561749 ERO1BQ86YB8 467 aa28.08■■■□□ 2.09
SMPD3-202ENST00000561749 SCYL3Q8IZE3 742 aa28.08■■■□□ 2.09
SMPD3-202ENST00000561749 CYP2D7A0A087X1C5 515 aa28.07■■■□□ 2.08
SMPD3-202ENST00000561749 A0A0D9SFI3 127 aa28.07■■■□□ 2.08
SMPD3-202ENST00000561749 NMIQ13287 307 aaPredicted RBP28.07■■■□□ 2.08
SMPD3-202ENST00000561749 DDRGK1Q96HY6 314 aa28.07■■■□□ 2.08
SMPD3-202ENST00000561749 GSG1L2A8MUP6 293 aa28.06■■■□□ 2.08
SMPD3-202ENST00000561749 CTNND1O60716 968 aaKnown RBP28.06■■■□□ 2.08
SMPD3-202ENST00000561749 SDSP20132 328 aa28.06■■■□□ 2.08
SMPD3-202ENST00000561749 CCDC84Q86UT8 332 aaPredicted RBP28.06■■■□□ 2.08
SMPD3-202ENST00000561749 METTL16Q86W50 562 aaKnown RBP28.06■■■□□ 2.08
SMPD3-202ENST00000561749 PICK1Q9NRD5 415 aa28.06■■■□□ 2.08
SMPD3-202ENST00000561749 SERPINB13Q9UIV8 391 aa28.06■■■□□ 2.08
SMPD3-202ENST00000561749 USP17L12C9JPN9 530 aa28.05■■■□□ 2.08
SMPD3-202ENST00000561749 USP17L21D6R901 530 aa28.05■■■□□ 2.08
SMPD3-202ENST00000561749 SMIM22K7EJ46 135 aa28.05■■■□□ 2.08
SMPD3-202ENST00000561749 APPP05067 770 aa28.05■■■□□ 2.08
SMPD3-202ENST00000561749 BEGAINQ9BUH8 593 aa28.05■■■□□ 2.08
SMPD3-202ENST00000561749 EHD4Q9H223 541 aa28.05■■■□□ 2.08
SMPD3-202ENST00000561749 EPB41L4AQ9HCS5 686 aaPredicted RBP28.05■■■□□ 2.08
SMPD3-202ENST00000561749 GDF11O95390 407 aa28.04■■■□□ 2.08
SMPD3-202ENST00000561749 GNAT2P19087 354 aa28.04■■■□□ 2.08
SMPD3-202ENST00000561749 CAP2P40123 477 aa28.04■■■□□ 2.08
SMPD3-202ENST00000561749 SHROOM1Q2M3G4 852 aaPredicted RBP28.04■■■□□ 2.08
SMPD3-202ENST00000561749 HELLSQ9NRZ9 838 aa28.04■■■□□ 2.08
SMPD3-202ENST00000561749 TSKSQ9UJT2 592 aa28.04■■■□□ 2.08
SMPD3-202ENST00000561749 PTPRFP10586 1907 aa28.03■■■□□ 2.08
SMPD3-202ENST00000561749 MANSC4A6NHS7 340 aaPredicted RBP28.03■■■□□ 2.08
SMPD3-202ENST00000561749 IRF6O14896 467 aa28.03■■■□□ 2.08
SMPD3-202ENST00000561749 FOXN1O15353 648 aa28.03■■■□□ 2.08
SMPD3-202ENST00000561749 PTPRAP18433 802 aa28.03■■■□□ 2.08
SMPD3-202ENST00000561749 PPIL2Q13356 520 aa28.03■■■□□ 2.08
SMPD3-202ENST00000561749 CTR9Q6PD62 1173 aa28.03■■■□□ 2.08
SMPD3-202ENST00000561749 DYNLL2Q96FJ2 89 aa28.03■■■□□ 2.08
SMPD3-202ENST00000561749 JAG1P78504 1218 aa28.02■■■□□ 2.08
SMPD3-202ENST00000561749 PPATQ06203 517 aa28.02■■■□□ 2.08
SMPD3-202ENST00000561749 SREBF2Q12772 1141 aa28.02■■■□□ 2.08
SMPD3-202ENST00000561749 AMOTL1Q8IY63 956 aa28.02■■■□□ 2.08
SMPD3-202ENST00000561749 SLC44A5Q8NCS7 719 aa28.02■■■□□ 2.08
SMPD3-202ENST00000561749 DIAPH3Q9NSV4 1193 aa28.02■■■□□ 2.08
SMPD3-202ENST00000561749 PPP4R2Q9NY27 417 aa28.02■■■□□ 2.08
SMPD3-202ENST00000561749 PATL2C9JE40 543 aaKnown RBP28.01■■■□□ 2.07
SMPD3-202ENST00000561749 TDO2P48775 406 aa28.01■■■□□ 2.07
SMPD3-202ENST00000561749 MCMDC2Q4G0Z9 681 aa28.01■■■□□ 2.07
SMPD3-202ENST00000561749 C12orf60Q5U649 245 aa28.01■■■□□ 2.07
SMPD3-202ENST00000561749 ZHX2Q9Y6X8 837 aa28.01■■■□□ 2.07
SMPD3-202ENST00000561749 SHMT1P34896 483 aa28■■■□□ 2.07
SMPD3-202ENST00000561749 TM4SF4P48230 202 aa28■■■□□ 2.07
SMPD3-202ENST00000561749 GABPAQ06546 454 aa28■■■□□ 2.07
SMPD3-202ENST00000561749 ERICH6BQ5W0A0 696 aa28■■■□□ 2.07
SMPD3-202ENST00000561749 ZNF589Q86UQ0 364 aaPredicted RBP28■■■□□ 2.07
SMPD3-202ENST00000561749 REM2Q8IYK8 340 aaPredicted RBP28■■■□□ 2.07
SMPD3-202ENST00000561749 IFNL3Q8IZI9 196 aa28■■■□□ 2.07
SMPD3-202ENST00000561749 STK11IPQ8N1F8 1099 aa28■■■□□ 2.07
SMPD3-202ENST00000561749 MS4A4AQ96JQ5 239 aa28■■■□□ 2.07
SMPD3-202ENST00000561749 ARPP21Q9UBL0 812 aaPredicted RBP28■■■□□ 2.07
SMPD3-202ENST00000561749 CCL15-CCL14A0A0B4J2E2 113 aa27.99■■■□□ 2.07
SMPD3-202ENST00000561749 MINDY4BA8MYZ0 360 aa27.99■■■□□ 2.07
SMPD3-202ENST00000561749 TRPA1O75762 1119 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms