RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 HTRA3P83110 453 aa11.55□□□□□ -0.56
RABGGTA-221ENST00000561055 NMIQ13287 307 aaPredicted RBP11.55□□□□□ -0.56
RABGGTA-221ENST00000561055 TTLL12Q14166 644 aaPredicted RBP11.55□□□□□ -0.56
RABGGTA-221ENST00000561055 NOL9Q5SY16 702 aaKnown RBP11.55□□□□□ -0.56
RABGGTA-221ENST00000561055 MIGA2Q7L4E1 593 aa11.55□□□□□ -0.56
RABGGTA-221ENST00000561055 FAM227BQ96M60 508 aa11.55□□□□□ -0.56
RABGGTA-221ENST00000561055 MCM9Q9NXL9 1143 aa11.55□□□□□ -0.56
RABGGTA-221ENST00000561055 FZD1Q9UP38 647 aa11.55□□□□□ -0.56
RABGGTA-221ENST00000561055 FOXP2O15409 715 aa11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 CTNND1O60716 968 aaKnown RBP11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 HLA-DOAP06340 250 aa11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 SLC10A3P09131 477 aa11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 CHMLP26374 656 aa11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 MFAP1P55081 439 aaKnown RBP11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 GABPAQ06546 454 aa11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 PRKG1Q13976 671 aa11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 ALX1Q15699 326 aa11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 C12orf60Q5U649 245 aa11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 TATDN1Q6P1N9 297 aa11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 SKAP1Q86WV1 359 aa11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 IFNL3Q8IZI9 196 aa11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 DDRGK1Q96HY6 314 aa11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 WRNIP1Q96S55 665 aa11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 DNAJC18Q9H819 358 aa11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 SERPINB13Q9UIV8 391 aa11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 MYH4Q9Y623 1939 aa11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 ZMYM6O95789 1325 aa11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 WDR33Q9C0J8 1336 aaKnown RBP11.54□□□□□ -0.56
RABGGTA-221ENST00000561055 USP17L12C9JPN9 530 aa11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 USP17L21D6R901 530 aa11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 POLR3DP05423 398 aaPredicted RBP11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 MAP2K2P36507 400 aa11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 VEGFBP49765 207 aa11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 PLCD1P51178 756 aa11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 ZNF157P51786 506 aaPredicted RBP11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 VGLL4Q14135 290 aa11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 CTR9Q6PD62 1173 aa11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 RASAL3Q86YV0 1011 aa11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 SLC10A4Q96EP9 437 aa11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 CAPNS2Q96L46 248 aa11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 EPB41L4AQ9HCS5 686 aaPredicted RBP11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 DIAPH3Q9NSV4 1193 aa11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 GINM1Q9NU53 330 aa11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 ARPP21Q9UBL0 812 aaPredicted RBP11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 SAP30BPQ9UHR5 308 aaKnown RBP11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 CSADQ9Y600 493 aa11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 CCDC171Q6TFL3 1326 aa11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 RAD50Q92878 1312 aa11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 ROBO3Q96MS0 1386 aa11.53□□□□□ -0.56
RABGGTA-221ENST00000561055 SLURP2P0DP57 97 aa11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 ZBTB48P10074 688 aaPredicted RBP11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 HSPD1P10809 573 aaKnown RBP11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 INPP5BP32019 993 aa11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 CAP2P40123 477 aa11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 NOGQ13253 232 aa11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 CYP4F22Q6NT55 531 aa11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 CWC27Q6UX04 472 aaKnown RBP11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 CCDC129Q6ZRS4 1044 aa11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 ZNF589Q86UQ0 364 aaPredicted RBP11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 ERO1BQ86YB8 467 aa11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 AMOTL1Q8IY63 956 aa11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 REM2Q8IYK8 340 aaPredicted RBP11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 SCYL3Q8IZE3 742 aa11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 JMYQ8N9B5 988 aa11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 RUFY2Q8WXA3 655 aa11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 CLMNQ96JQ2 1002 aa11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 NACAP1Q9BZK3 213 aa11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 SWAP70Q9UH65 585 aa11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 SNCAIPQ9Y6H5 919 aa11.52□□□□□ -0.57
RABGGTA-221ENST00000561055 SPDYE5A6NIY4 337 aa11.51□□□□□ -0.57
RABGGTA-221ENST00000561055 VPS53Q5VIR6 699 aa11.51□□□□□ -0.57
RABGGTA-221ENST00000561055 SPRYD7Q5W111 196 aa11.51□□□□□ -0.57
RABGGTA-221ENST00000561055 C16orf86Q6ZW13 317 aa11.51□□□□□ -0.57
RABGGTA-221ENST00000561055 CRACR2BQ8N4Y2 399 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-221ENST00000561055 ZKSCAN4Q969J2 545 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-221ENST00000561055 WNK4Q96J92 1243 aa11.51□□□□□ -0.57
RABGGTA-221ENST00000561055 DSCC1Q9BVC3 393 aa11.51□□□□□ -0.57
RABGGTA-221ENST00000561055 TBC1D2Q9BYX2 928 aa11.51□□□□□ -0.57
RABGGTA-221ENST00000561055 ANAPC4Q9UJX5 808 aa11.51□□□□□ -0.57
RABGGTA-221ENST00000561055 LOC285556D6RIA3 1793 aa11.51□□□□□ -0.57
RABGGTA-221ENST00000561055 FAM196BA6NMK8 535 aa11.5□□□□□ -0.57
RABGGTA-221ENST00000561055 SGSM2O43147 1006 aa11.5□□□□□ -0.57
RABGGTA-221ENST00000561055 FGAP02671 866 aa11.5□□□□□ -0.57
RABGGTA-221ENST00000561055 APPP05067 770 aa11.5□□□□□ -0.57
RABGGTA-221ENST00000561055 CYP2D6P10635 497 aa11.5□□□□□ -0.57
RABGGTA-221ENST00000561055 SHMT1P34896 483 aa11.5□□□□□ -0.57
RABGGTA-221ENST00000561055 TDO2P48775 406 aa11.5□□□□□ -0.57
RABGGTA-221ENST00000561055 INHBEP58166 350 aa11.5□□□□□ -0.57
RABGGTA-221ENST00000561055 EVX2Q03828 476 aa11.5□□□□□ -0.57
RABGGTA-221ENST00000561055 PPATQ06203 517 aa11.5□□□□□ -0.57
RABGGTA-221ENST00000561055 RRP1BQ14684 758 aaKnown RBP11.5□□□□□ -0.57
RABGGTA-221ENST00000561055 NAPBQ9H115 298 aa11.5□□□□□ -0.57
RABGGTA-221ENST00000561055 IL25Q9H293 177 aa11.5□□□□□ -0.57
RABGGTA-221ENST00000561055 CYP2D7A0A087X1C5 515 aa11.49□□□□□ -0.57
RABGGTA-221ENST00000561055 TESPA1A2RU30 521 aaPredicted RBP11.49□□□□□ -0.57
RABGGTA-221ENST00000561055 ASNSP08243 561 aa11.49□□□□□ -0.57
RABGGTA-221ENST00000561055 PTPRAP18433 802 aa11.49□□□□□ -0.57
RABGGTA-221ENST00000561055 GJA5P36382 358 aa11.49□□□□□ -0.57
RABGGTA-221ENST00000561055 TM4SF4P48230 202 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms