RNA–Protein interactions for RNA: ENST00000560731.5

MARK3-222, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-222ENST00000560731 LARGE2Q8N3Y3 721 aa9.42□□□□□ -0.9
MARK3-222ENST00000560731 TTLL11Q8NHH1 800 aa9.42□□□□□ -0.9
MARK3-222ENST00000560731 KLHDC4Q8TBB5 520 aa9.42□□□□□ -0.9
MARK3-222ENST00000560731 FAM200AQ8TCP9 573 aa9.42□□□□□ -0.9
MARK3-222ENST00000560731 EAF2Q96CJ1 260 aaPredicted RBP9.42□□□□□ -0.9
MARK3-222ENST00000560731 ZNF594Q96JF6 807 aaPredicted RBP9.42□□□□□ -0.9
MARK3-222ENST00000560731 AGBL1Q96MI9 1066 aa9.42□□□□□ -0.9
MARK3-222ENST00000560731 GPR108Q9NPR9 543 aa9.42□□□□□ -0.9
MARK3-222ENST00000560731 KIAA1024Q9UPX6 916 aa9.42□□□□□ -0.9
MARK3-222ENST00000560731 NUP98P52948 1817 aa9.42□□□□□ -0.9
MARK3-222ENST00000560731 BRWD3Q6RI45 1802 aa9.41□□□□□ -0.9
MARK3-222ENST00000560731 FIGNL2A6NMB9 653 aa9.41□□□□□ -0.9
MARK3-222ENST00000560731 EYA2O00167 538 aa9.41□□□□□ -0.9
MARK3-222ENST00000560731 EIF5BO60841 1220 aaKnown RBP9.41□□□□□ -0.9
MARK3-222ENST00000560731 CDC45O75419 566 aa9.41□□□□□ -0.9
MARK3-222ENST00000560731 DKK1O94907 266 aa9.41□□□□□ -0.9
MARK3-222ENST00000560731 NTSR2O95665 410 aa9.41□□□□□ -0.9
MARK3-222ENST00000560731 HSP90B1P14625 803 aaKnown RBP9.41□□□□□ -0.9
MARK3-222ENST00000560731 IL15P40933 162 aaPredicted RBP9.41□□□□□ -0.9
MARK3-222ENST00000560731 KCNA1Q09470 495 aa9.41□□□□□ -0.9
MARK3-222ENST00000560731 DPYDQ12882 1025 aa9.41□□□□□ -0.9
MARK3-222ENST00000560731 CCDC57Q2TAC2 916 aa9.41□□□□□ -0.9
MARK3-222ENST00000560731 SLC10A5Q5PT55 438 aa9.41□□□□□ -0.9
MARK3-222ENST00000560731 TRAPPC3LQ5T215 181 aa9.41□□□□□ -0.9
MARK3-222ENST00000560731 POTEAQ6S8J7 498 aa9.41□□□□□ -0.9
MARK3-222ENST00000560731 SIX5Q8N196 739 aa9.41□□□□□ -0.9
MARK3-222ENST00000560731 ZSCAN1Q8NBB4 408 aa9.41□□□□□ -0.9
MARK3-222ENST00000560731 PI4K2BQ8TCG2 481 aa9.41□□□□□ -0.9
MARK3-222ENST00000560731 SIL1Q9H173 461 aa9.41□□□□□ -0.9
MARK3-222ENST00000560731 NIP7Q9Y221 180 aaKnown RBP eCLIP9.41□□□□□ -0.9
MARK3-222ENST00000560731 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.41□□□□□ -0.9
MARK3-222ENST00000560731 LY75O60449 1722 aa9.41□□□□□ -0.9
MARK3-222ENST00000560731 SH3TC1Q8TE82 1336 aa9.4□□□□□ -0.9
MARK3-222ENST00000560731 IFIT2P09913 472 aaKnown RBP9.4□□□□□ -0.9
MARK3-222ENST00000560731 PTGIRP43119 386 aa9.4□□□□□ -0.9
MARK3-222ENST00000560731 CTSWP56202 376 aa9.4□□□□□ -0.9
MARK3-222ENST00000560731 PTSQ03393 145 aa9.4□□□□□ -0.9
MARK3-222ENST00000560731 TFCP2Q12800 502 aa9.4□□□□□ -0.9
MARK3-222ENST00000560731 IFIT5Q13325 482 aaKnown RBP9.4□□□□□ -0.9
MARK3-222ENST00000560731 SMIM5Q71RC9 77 aa9.4□□□□□ -0.9
MARK3-222ENST00000560731 AACSQ86V21 672 aa9.4□□□□□ -0.9
MARK3-222ENST00000560731 INSM2Q96T92 566 aaPredicted RBP9.4□□□□□ -0.9
MARK3-222ENST00000560731 BCL11AQ9H165 835 aa9.4□□□□□ -0.9
MARK3-222ENST00000560731 ECHDC1Q9NTX5 307 aa9.4□□□□□ -0.9
MARK3-222ENST00000560731 CHMP3Q9Y3E7 222 aa9.4□□□□□ -0.9
MARK3-222ENST00000560731 PCDHGA11Q9Y5H2 935 aa9.4□□□□□ -0.9
MARK3-222ENST00000560731 PATL2C9JE40 543 aaKnown RBP9.39□□□□□ -0.91
MARK3-222ENST00000560731 ERC2O15083 957 aa9.39□□□□□ -0.91
MARK3-222ENST00000560731 GLRX3O76003 335 aaKnown RBP9.39□□□□□ -0.91
MARK3-222ENST00000560731 ADD1P35611 737 aaKnown RBP9.39□□□□□ -0.91
MARK3-222ENST00000560731 ANP32AP39687 249 aaKnown RBP9.39□□□□□ -0.91
MARK3-222ENST00000560731 CTSOP43234 321 aaPredicted RBP9.39□□□□□ -0.91
MARK3-222ENST00000560731 TXNRD1Q16881 649 aa9.39□□□□□ -0.91
MARK3-222ENST00000560731 LRRC24Q50LG9 513 aa9.39□□□□□ -0.91
MARK3-222ENST00000560731 TNNI3KQ59H18 835 aa9.39□□□□□ -0.91
MARK3-222ENST00000560731 USPL1Q5W0Q7 1092 aa9.39□□□□□ -0.91
MARK3-222ENST00000560731 TBC1D9BQ66K14 1250 aa9.39□□□□□ -0.91
MARK3-222ENST00000560731 AMIGO3Q86WK7 504 aa9.39□□□□□ -0.91
MARK3-222ENST00000560731 TBC1D32Q96NH3 1257 aa9.39□□□□□ -0.91
MARK3-222ENST00000560731 PUS3Q9BZE2 481 aaKnown RBP9.39□□□□□ -0.91
MARK3-222ENST00000560731 CCDC8Q9H0W5 538 aaPredicted RBP9.39□□□□□ -0.91
MARK3-222ENST00000560731 UPF2Q9HAU5 1272 aaKnown RBP9.39□□□□□ -0.91
MARK3-222ENST00000560731 POLMQ9NP87 494 aaPredicted RBP9.39□□□□□ -0.91
MARK3-222ENST00000560731 SRP68Q9UHB9 627 aaKnown RBP9.39□□□□□ -0.91
MARK3-222ENST00000560731 RIPOR2Q9Y4F9 1068 aa9.39□□□□□ -0.91
MARK3-222ENST00000560731 FPGT-TNNI3KV9GXZ4 949 aa9.39□□□□□ -0.91
MARK3-222ENST00000560731 ANKRD36CQ5JPF3 1778 aa9.39□□□□□ -0.91
MARK3-222ENST00000560731 ANKRD18BA2A2Z9 1011 aa9.38□□□□□ -0.91
MARK3-222ENST00000560731 MYCP01106 439 aaPredicted RBP9.38□□□□□ -0.91
MARK3-222ENST00000560731 HCLS1P14317 486 aaPredicted RBP9.38□□□□□ -0.91
MARK3-222ENST00000560731 ITGA6P23229 1130 aa9.38□□□□□ -0.91
MARK3-222ENST00000560731 RFC4P35249 363 aa9.38□□□□□ -0.91
MARK3-222ENST00000560731 SCTRP47872 440 aa9.38□□□□□ -0.91
MARK3-222ENST00000560731 TSHZ3Q63HK5 1081 aa9.38□□□□□ -0.91
MARK3-222ENST00000560731 GPATCH3Q96I76 525 aa9.38□□□□□ -0.91
MARK3-222ENST00000560731 SETDB2Q96T68 719 aa9.38□□□□□ -0.91
MARK3-222ENST00000560731 GREM2Q9H772 168 aa9.38□□□□□ -0.91
MARK3-222ENST00000560731 ZNF395Q9H8N7 513 aaPredicted RBP9.38□□□□□ -0.91
MARK3-222ENST00000560731 RTL9Q8NET4 1388 aa9.37□□□□□ -0.91
MARK3-222ENST00000560731 APBA3O96018 575 aa9.37□□□□□ -0.91
MARK3-222ENST00000560731 ATP5JP18859 108 aa9.37□□□□□ -0.91
MARK3-222ENST00000560731 CHMLP26374 656 aa9.37□□□□□ -0.91
MARK3-222ENST00000560731 SSFA2P28290 1259 aa9.37□□□□□ -0.91
MARK3-222ENST00000560731 ERVK-9P63128 1117 aa9.37□□□□□ -0.91
MARK3-222ENST00000560731 SF3B3Q15393 1217 aaKnown RBP9.37□□□□□ -0.91
MARK3-222ENST00000560731 CCDC102BQ68D86 513 aa9.37□□□□□ -0.91
MARK3-222ENST00000560731 CASC1Q6TDU7 716 aa9.37□□□□□ -0.91
MARK3-222ENST00000560731 CCDC155Q8N6L0 562 aa9.37□□□□□ -0.91
MARK3-222ENST00000560731 TPCN2Q8NHX9 752 aa9.37□□□□□ -0.91
MARK3-222ENST00000560731 CLP1Q92989 425 aaKnown RBP9.37□□□□□ -0.91
MARK3-222ENST00000560731 IPO9Q96P70 1041 aaKnown RBP9.37□□□□□ -0.91
MARK3-222ENST00000560731 NYXQ9GZU5 481 aa9.37□□□□□ -0.91
MARK3-222ENST00000560731 CYLDQ9NQC7 956 aa9.37□□□□□ -0.91
MARK3-222ENST00000560731 TAF1LQ8IZX4 1826 aa9.37□□□□□ -0.91
MARK3-222ENST00000560731 C4BP0C0L5 1744 aa9.36□□□□□ -0.91
MARK3-222ENST00000560731 SLC35F4A4IF30 521 aa9.36□□□□□ -0.91
MARK3-222ENST00000560731 FAM177BA6PVY3 158 aa9.36□□□□□ -0.91
MARK3-222ENST00000560731 RBM25P49756 843 aaKnown RBP9.36□□□□□ -0.91
MARK3-222ENST00000560731 MFAP1P55081 439 aaKnown RBP9.36□□□□□ -0.91
MARK3-222ENST00000560731 SWI5Q1ZZU3 235 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms